Homo sapiens (human): 1289 Help Entry 1289              CDS       T01001                                  Symbol COL5A1, EDSC, EDSCL1, FMDMF Name (RefSeq) collagen type V alpha 1 chain   KO K19721   collagen type V/XI/XXIV/XXVII, alpha Organism hsa  Homo sapiens (human) Pathway hsa04820   Cytoskeleton in muscle cells hsa04974   Protein digestion and absorption Network nt06539  Cytoskeleton in muscle cells   Element N01814   Extracellular matrix - Basal lamina Disease H00802   Ehlers-Danlos syndrome H02719   Multifocal fibromuscular dysplasia Brite KEGG Orthology (KO) [BR:hsa00001]  09140 Cellular Processes   09142 Cell motility    04820 Cytoskeleton in muscle cells     1289 (COL5A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     1289 (COL5A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:hsa00536]     1289 (COL5A1) Glycosaminoglycan binding proteins [BR:hsa00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    1289 (COL5A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Laminin_G_2 Laminin_G_1 Motif Other DBs NCBI-GeneID:  1289 NCBI-ProteinID:  NP_000084 OMIM:  120215 HGNC:  2209 Ensembl:  ENSG00000130635 UniProt:  P20908 B2ZZ86 Q59EE7 Structure PDBPDBj LinkDB All DBs Position 9:134641803..134844843 Genome browser AA seq 1838 aa AA seqDB search MDVHTRWKARSALRPGAPLLPPLLLLLLWAPPPSRAAQPADLLKVLDFHNLPDGITKTTG FCATRRSSKGPDVAYRVTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIY NEQGIQQIGLELGRSPVFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLI LDCKKKTTKFLDRSDHPMIDINGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHY SPDCDTAVPDTPQSQDPNPDEYYTEGDGEGETYYYEYPYYEDPEDLGKEPTPSKKPVEAA KETTEVPEELTPTPTEAAPMPETSEGAGKEEDVGIGDYDYVPSEDYYTPSPYDDLTYGEG EENPDQPTDPGAGAEIPTSTADTSNSSNPAPPPGEGADDLEGEFTEETIRNLDENYYDPY YDPTSSPSEIGPGMPANQDTIYEGIGGPRGEKGQKGEPAIIEPGMLIEGPPGPEGPAGLP GPPGTMGPTGQVGDPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVS AQESQAQAILQQARLALRGPAGPMGLTGRPGPVGPPGSGGLKGEPGDVGPQGPRGVQGPP GPAGKPGRRGRAGSDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDD GERGDDGEVGPRGLPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQPGPKGNVGPQGEPGPP GQQGNPGAQGLPGPQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPP GPQGPIGYPGPRGVKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGED GPEGPKGRGGPNGDPGPLGPPGEKGKLGVPGLPGYPGRQGPKGSIGFPGFPGANGEKGGR GTPGKPGPRGQRGPTGPRGERGPRGITGKPGPKGNSGGDGPAGPPGERGPNGPQGPTGFP GPKGPPGPPGKDGLPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPP GPPGEQGLPGLAGKEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGNEGPP GPPGPAGSPGERGPAGAAGPIGIPGRPGPQGPPGPAGEKGAPGEKGPQGPAGRDGLQGPV GLPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQGPPGPTGPQGPIGQPGPSGADGEP GPRGQQGLFGQKGDEGPRGFPGPPGPVGLQGLPGPPGEKGETGDVGQMGPPGPPGPRGPS GAPGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPPGPKGERGEKGESGPSGAA GPPGPKGPPGDDGPKGSPGPVGFPGDPGPPGEPGPAGQDGPPGDKGDDGEPGQTGSPGPT GEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGEAGLEGPPGKTGPIGPQGAPGKPGPDGLR GIPGPVGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGEQGEK GDRGLPGPQGSSGPKGEQGITGPSGPIGPPGPPGLPGPPGPKGAKGSSGPTGPKGEAGHP GPPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGNGENYVDYADGMEEIFGSLNSLKL EIEQMKRPLGTQQNPARTCKDLQLCHPDFPDGEYWVDPNQGCSRDSFKVYCNFTAGGSTC VFPDKKSEGARITSWPKENPGSWFSEFKRGKLLSYVDAEGNPVGVVQMTFLRLLSASAHQ NVTYHCYQSVAWQDAATGSYDKALRFLGSNDEEMSYDNNPYIRALVDGCATKKGYQKTVL EIDTPKVEQVPIVDIMFNDFGEASQKFGFEVGPACFMG NT seq 5517 nt NT seq  +upstreamnt  +downstreamnt atggacgtccatacccgctggaaagcgcgcagcgcgctccgcccgggcgccccgctgctg cccccgctgctgctgctgctgctgtgggcgccgcctccgagccgcgcagctcagccagca gatctcctgaaggttctagattttcacaacttgcctgatggaataacaaagacaacaggc ttttgcgccacgcggcgatcttccaaaggcccggatgtcgcttacagagtcaccaaagac gcgcagctcagcgcacccaccaagcagctgtaccctgcgtctgcatttcccgaggacttc tccatcctaacaactgtgaaagccaagaaaggcagccaggccttcctggtctccatctac aacgagcagggtatccagcagattgggctggagctgggccgctctcccgtcttcctctac gaggaccacacggggaagcctggcccggaagactaccccctcttccggggcatcaacctg tcagatggcaagtggcacagaattgctctcagcgtccacaagaaaaatgtcaccttgatc ctcgactgtaaaaagaagaccaccaaattcctcgaccgcagcgaccaccccatgatcgac atcaatggcatcatcgtgtttggcacccggatcctggatgaggaggtgtttgagggtgac atccagcagctgctctttgtctcggaccaccgggcagcttatgattactgtgagcactac agccctgactgtgacaccgcagtacctgacaccccacagtcgcaggaccccaatccagat gaatattacacggaaggagacggcgagggtgagacctattactacgaatacccctactac gaagaccccgaagacctagggaaggagcccacccccagcaagaagcccgtggaagctgcc aaagaaaccacagaggtccccgaggagctgaccccgacccccacggaagctgctcccatg cctgaaaccagtgaaggggctgggaaggaagaggacgtcggcatcggggactatgactac gtgcccagtgaggactactacacgccctcaccgtatgatgacctcacctatggcgagggg gaggagaaccccgaccagcccacagacccaggcgctggggccgaaattcccaccagcacc gccgacacctccaactcctccaatccagctccgcctccaggggaaggtgcggatgacttg gagggggagttcactgaggaaacgatccggaaccttgacgagaactactacgacccctac tacgaccccaccagctccccgtcggagatcgggccgggaatgccggcgaaccaggatacc atctatgaagggattggaggacctcggggcgagaaaggccaaaagggagaaccagcgatt atcgagccgggcatgctcatcgagggcccgcctggcccagaaggccccgcgggtcttccc ggacctccaggaaccatgggtcccactggccaagtcggggaccctggagaaaggggcccc cctggacgcccaggccttcctggggccgatggcctgcccggtcctccaggaaccatgctc atgctgcccttccggtttggaggtggcggcgatgcgggctccaaaggccccatggtctca gcccaggagtcccaggcgcaagccattctccagcaggccaggttggcactgaggggacca gctggcccgatgggtctcacagggagacctggccctgtgggtccccctgggagcggaggt ttgaagggcgagccgggagacgtggggcctcagggtcctcgaggtgtgcaaggcccgcct ggtccggccgggaagcccggaagacggggtcgggctgggagtgatggagccagaggaatg cctggacaaactggccccaagggtgaccggggtttcgacggcctggctgggttgccaggc gagaagggccacaggggtgaccctggtccttccggcccaccaggacctccgggagacgat ggagaaaggggtgacgacggagaagttgggcccagggggctgcctggggagcccgggcca cgtggtctgcttgggccgaaggggcccccaggtcctcccggacctcccggtgtcacgggt atggacggccagccggggccaaaaggaaatgtgggtccccagggagagcctggcccccca ggacagcagggtaatccaggcgcccagggtcttccaggcccccagggtgcaattggtcct ccaggagaaaagggtcccttggggaaaccaggccttccaggaatgcccggtgctgacgga cccccgggacaccctggcaaagaaggccctccaggagagaaaggaggtcagggtccacct ggcccccagggtccgattggctacccaggtcctcgaggagtcaagggggccgatggcatc cgtggtctgaagggcacaaagggcgagaagggtgaagacggctttcctgggtttaaagga gacatgggcatcaagggtgatcggggggagatcggcccacccggtcccaggggagaagat ggccctgaaggcccaaagggtcgcggaggtcccaatggtgaccccggtcctctgggaccc cctggggagaagggaaaactcggagtcccagggttaccagggtatccaggaagacaagga ccaaagggctctattggattccctggatttcctggcgccaatggagagaagggcggcagg gggacccctggaaagccaggaccgcgggggcagcgaggcccaacgggtccgaggggtgaa agaggcccccggggcatcactgggaagcctggccccaagggcaactccggaggtgacggc ccagctggccctcctggtgaacggggacccaatggaccccaaggacccacaggatttcct ggaccaaagggcccccctggccctccaggcaaggatggactcccaggacaccctggacag agaggcgagactggtttccaaggcaagaccggccctccaggcccccccggcgtggtcggc cctcagggtcccacgggagaaacgggcccaatgggtgagcgtggccaccctgggccccct ggaccccccggtgaacaggggcttccgggccttgctggaaaagaagggacgaagggtgac ccaggccctgcaggcctccctgggaaagatggccctccaggattacgtggtttccctggg gaccgagggcttcctggtccagtgggagctcttggactgaaaggcaatgaagggccccct ggcccaccaggccctgcgggatctccaggggagagaggtccagctggagccgctgggccc atcggaattccagggagacctgggccccagggacccccagggccggcaggagagaaaggg gctcctggcgagaaaggcccacaaggcccagctggccgagacggtctccaggggcctgtg gggctcccgggtccagctggccctgtgggtccccctggagaagacggagataagggagag atcggggagccggggcagaaaggaagcaagggggacaaaggagaacagggtcctcctggg cctacaggtcctcaaggccccatcggacagccaggcccctctggagctgacggcgagccg gggcctcggggccagcagggccttttcgggcagaaaggtgatgaaggtcccagaggcttt cctggaccccctgggccagtggggctgcagggtttgccaggacctccaggcgagaagggt gagacaggagacgtgggccagatgggccccccgggtccccctggcccccgaggaccctcc ggagctccaggtgctgatggcccacaaggtcccccaggtggaataggaaaccctggtgca gtgggagagaagggcgagcctggcgaagcaggtgagcctggccttccgggagaaggcggc cccccgggacccaaaggagaaaggggagagaagggcgagtcaggcccttcaggtgctgcc ggaccccctggacccaaaggccctcccggagatgatggtcccaaaggcagccctggccca gtgggttttcctggagatcctggcccccccggagagcctggccccgcgggtcaagatggt ccccctggtgacaaaggagatgatggtgaacccgggcagacgggatcccccggccctact ggtgaaccaggtccatcggggcctccaggaaaaaggggtcccccaggccccgcaggcccc gaaggcagacagggagagaaaggggccaagggagaagccggcttggaaggccctcctggg aagactggccccatcggcccccagggggcccctgggaagcccggaccggatggccttcga gggatccctggccctgtgggagaacaaggtctcccaggatccccaggcccggacggtccc cccggccccatgggtcccccaggacttcccggcctcaaaggagattctggtcccaaaggt gaaaagggtcatccaggcctgatcgggctcatcggtcctccgggtgaacagggtgagaag ggcgaccgtggtctccctggcccccagggctcctccggtcctaagggagaacagggtatc actggtccttctggcccgattgggcctcctgggccccctggcctgccgggtccgcctggt ccaaaaggtgctaagggctcctcgggtccaactggcccgaagggtgaggcaggccaccca ggacccccaggccccccgggccccccgggagaggtcatccagcccctgccaatccaggca tccaggacgcggcggaacatcgacgccagccagctgctggacgacgggaatggcgagaac tacgtggactacgcggacggcatggaagagatcttcggctctctcaactctctgaagctg gagattgagcagatgaaacggcccctgggcacgcagcagaaccccgcccgcacctgcaag gacctgcagctctgccaccccgacttcccagatggtgaatactgggtcgatcctaaccaa ggatgctccagggattccttcaaggtttactgcaacttcacagccggggggtcgacatgc gtcttccctgacaagaagtccgaaggggccagaatcacttcttggcccaaagaaaacccg ggctcctggttcagtgaattcaagcgtgggaaactgctctcctatgtggacgccgagggc aaccctgtgggtgtggtacagatgaccttcctgcggctgctgagcgcctctgcccaccag aacgtcacctaccactgctaccagtcagtggcctggcaggacgcagccacgggcagctac gacaaggccctccgcttcctgggctccaacgacgaggagatgtcctatgacaacaacccc tacatccgcgccctggtggacggctgtgctaccaagaaaggctaccagaagacggttctg gagatcgacacccccaaagtggagcaggtgcccatcgtggacatcatgttcaatgacttc ggtgaagcgtcacagaaatttggatttgaagtggggccggcttgcttcatgggctag

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