Homo sapiens (human): 1305
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Entry
1305 CDS
T01001
Symbol
COL13A1, CMS19, COLXIIIA1
Name
(RefSeq) collagen type XIII alpha 1 chain
KO
K16617
collagen type XIII alpha
Organism
hsa
Homo sapiens (human)
Pathway
hsa04974
Protein digestion and absorption
Disease
H00770
Congenital myasthenic syndrome
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
1305 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hsa00536
]
1305 (COL13A1)
Glycosaminoglycan binding proteins [BR:
hsa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
1305 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
1305
NCBI-ProteinID:
NP_001123575
OMIM:
120350
HGNC:
2190
Ensembl:
ENSG00000197467
UniProt:
Q5TAT6
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All DBs
Position
10:69801906..69959144
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AA seq
717 aa
AA seq
DB search
MVAERTHKAAATGARGPGELGAPGTVALVAARAERGARLPSPGSCGLLTLALCSLALSLL
AHFRTAELQARVLRLEAERGEQQMETAILGRVNQLLDEKWKLHSRRRREAPKTSPGCNCP
PGPPGPTGRPGLPGDKGAIGMPGRVGSPGDAGLSIIGPRGPPGQPGTRGFPGFPGPIGLD
GKPGHPGPKGDMGLTGPPGQPGPQGQKGEKGQCGEYPHRECLSSMPAALRSSQIIALKLL
PLLNSVRLAPPPVIKRRTFQGEQSQASIQGPPGPPGPPGPSGPLGHPGLPGPMGPPGLPG
PPGPKGDPGIQGYHGRKGERGMPGMPGKHGAKGAPGIAVAGMKGEPGIPGTKGEKGAEGS
PGLPGLLGQKGEKGDAGNSIGGGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDKGER
GAAGEQGPDGPKGSKGEPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQIGPPGAPGI
PGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKDGPPGVKGENGHPGSPGEKGE
KGETGQAGSPGEKGEAGEKGNPGAEVPGLPGPEGPPGPPGLQGVPGPKGEAGLDGAKGEK
GFQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGAA
GLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQGCWNK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggagcgcacccacaaagcggcagccaccggtgcccgcggccctggggagttg
ggcgcgcccgggacggtggctctggtggcggcgcgggcggagcgcggcgcacggctgccg
agtccagggtcgtgcgggctgctgacgctggccctctgctcgctggcactcagcctgctc
gcccactttcggacggccgagctgcaggcccgggtgctgcgcctggaagcggagcgcggg
gagcagcaaatggagacggctattttgggacgagtcaatcaactgctggacgagaaatgg
aagctccactcaaggaggcgccgggaggccccaaagacatctccaggatgtaactgccca
ccaggacctcctggtcccactggaagacccggactcccaggggacaaaggtgccattggg
atgcctggacgtgtggggtcccccggagacgctgggctgtccatcattggtccccgcggc
ccccctggtcaaccaggaactagaggtttccctggatttccgggtcccattgggctggac
ggcaaaccgggccacccaggaccaaagggcgacatgggtctgacgggtcccccaggacag
ccgggaccccagggacaaaaaggagaaaagggtcagtgtggagagtacccacaccgggag
tgcctaagcagcatgccagcagctctgcgctccagccaaataattgccctgaagctgctg
cctctcctcaattcagtgcgactggctccacccccggtcataaaaaggcggacgttccag
ggcgaacagagccaggccagcatccaaggtccaccagggcccccaggcccccctggacca
agtggacctctggggcacccaggactgccagggcctatggggccacctggcttacctggg
cctcctggaccaaagggagacccagggatccagggctaccacggccggaagggagaacgg
ggcatgccagggatgccaggcaagcatggagccaagggggcgcccggaattgccgtggct
gggatgaagggtgagccagggatcccaggaaccaagggtgagaagggggctgaaggctcc
cctgggcttcctggcctcctggggcagaagggagagaaaggcgatgctggcaactccatt
ggaggaggcagaggggaacctggccctccagggctccctgggcccccagggccaaaggga
gaagcaggtgtcgatggccaggttggccccccagggcagccaggagacaagggggagcgt
ggagcagctggagaacagggaccagatggccccaagggctccaagggagaaccagggaaa
ggagagatggtggattacaatggaaacatcaatgaggctctccaggagatccggacgctg
gccttgatggggcctcctggtcttcctgggcaaattggcccacctggagctccagggatt
ccaggccagaagggggagattggactgccaggccctccaggacacgatggggaaaaggga
cctcgcggtaaaccaggagacatgggccctcctggtccccaaggccccccaggaaaggat
ggacctccaggagtgaagggagaaaacgggcacccagggagcccaggagagaagggggaa
aaaggggagacaggacaagcaggctcaccgggagagaaaggagaagccggggagaagggc
aatccaggagcagaggttcctgggctgccagggccagaggggcctcccggacctccgggg
ctccaaggtgttcctggaccaaagggggaagcaggactagatggagcaaaaggagagaaa
ggcttccagggagaaaaaggagaccgtggtcccctgggactacccggagcttcaggtttg
gacggcaggcctgggccaccgggtactccaggaccaattggagttccaggcccagcggga
ccaaagggcgagaggggcagcaaaggagaccctgggatgacaggaccaacgggagcagct
gggcttcctggtttacatggaccacccggggacaagggaaaccggggggagagggggaag
aaaggctctagagggcctaaaggggataagggagaccaaggagcgcctggattagatgcc
ccctgcccattgggcgaagatggcttaccagtccaaggctgctggaacaagtga
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