Homo sapiens (human): 1306
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Entry
1306 CDS
T01001
Symbol
COL15A1
Name
(RefSeq) collagen type XV alpha 1 chain
KO
K08135
collagen type XV alpha
Organism
hsa
Homo sapiens (human)
Pathway
hsa04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
1306 (COL15A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsa00535
]
1306 (COL15A1)
Proteoglycans [BR:
hsa00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
1306 (COL15A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
1306
NCBI-ProteinID:
NP_001846
OMIM:
120325
HGNC:
2192
Ensembl:
ENSG00000204291
UniProt:
P39059
B3KTP7
Structure
PDB
LinkDB
All DBs
Position
9:98943907..99070787
Genome browser
AA seq
1388 aa
AA seq
DB search
MAPRRNNGQCWCLLMLLSVSTPLPAVTQTRGATETASQGHLDLTQLIGVPLPSSVSFVTG
YGGFPAYSFGPGANVGRPARTLIPSTFFRDFAISVVVKPSSTRGGVLFAITDAFQKVIYL
GLRLSGVEDGHQRIILYYTEPGSHVSQEAAAFSVPVMTHRWNRFAMIVQGEEVTLLVNCE
EHSRIPFQRSSQALAFESSAGIFMGNAGATGLERFTGSLQQLTVHPDPRTPEELCDPEES
SASGETSGLQEADGVAEILEAVTYTQASPKEAKVEPINTPPTPSSPFEDMELSGEPVPEG
TLETTNMSIIQHSSPKQGSGEILNDTLEGVHSVDGDPITDSGSGAGAFLDIAEEKNLAAT
AAGLAEVPISTAGEAEASSVPTGGPTLSMSTENPEEGVTPGPDNEERLAATAAGEAEALA
SMPGEVEASGVAPGELDLSMSAQSLGEEATVGPSSEDSLTTAAAATEVSLSTFEDEEASG
VPTDGLAPLTATMAPERAVTSGPGDEEDLAAATTEEPLITAGGEESGSPPPDGPPLPLPT
VAPERWITPAQREHVGMKGQAGPKGEKGDAGEELPGPPEPSGPVGPTAGAEAEGSGLGWG
SDVGSGSGDLVGSEQLLRGPPGPPGPPGLPGIPGKPGTDVFMGPPGSPGEDGPAGEPGPP
GPEGQPGVDGATGLPGMKGEKGARGPNGSVGEKGDPGNRGLPGPPGKKGQAGPPGVMGPP
GPPGPPGPPGPGCTMGLGFEDTEGSGSTQLLNEPKLSRPTAAIGLKGEKGDRGPKGERGM
DGASIVGPPGPRGPPGHIKVLSNSLINITHGFMNFSDIPELVGPPGPDGLPGLPGFPGPR
GPKGDTGLPGFPGLKGEQGEKGEPGAILTEDIPLERLMGKKGEPGMHGAPGPMGPKGPPG
HKGEFGLPGRPGRPGLNGLKGTKGDPGVIMQGPPGLPGPPGPPGPPGAVINIKGAIFPIP
VRPHCKMPVDTAHPGSPELITFHGVKGEKGSWGLPGSKGEKGDQGAQGPPGPPLDLAYLR
HFLNNLKGENGDKGFKGEKGEKGDINGSFLMSGPPGLPGNPGPAGQKGETVVGPQGPPGA
PGLPGPPGFGRPGDPGPPGPPGPPGPPAILGAAVALPGPPGPPGQPGLPGSRNLVTAFSN
MDDMLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIPADSPPPPALSSNPHQ
LLPPPNPISSANYEKPALHLAALNMPFSGDIRADFQCFKQARAAGLLSTYRAFLSSHLQD
LSTIVRKAERYSLPIVNLKGQVLFNNWDSIFSGHGGQFNMHIPIYSFDGRDIMTDPSWPQ
KVIWHGSSPHGVRLVDNYCEAWRTADTAVTGLASPLSTGKILDQKAYSCANRLIVLCIEN
SFMTDARK
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggcaccaaggaggaacaacgggcagtgctggtgtctgctgatgctgctctcggtctcc
acgcccctccctgctgtcacccagacccgcggtgcgacagagactgcttcccagggtcac
ctggacctcacgcagctcatcggtgtcccgctgccctcgtccgtatcctttgtcacaggc
tatggtggcttcccggcctacagtttcgggcctggtgccaatgttggccgcccagccagg
actctcatcccatccaccttcttcagggacttcgccatcagcgtcgtggtgaagcccagc
agcacccgtggtggcgtgctcttcgccatcactgacgccttccagaaggtcatctacctg
ggcctgcggctctcaggtgtggaggacggccaccagcggatcatcctctactacacggag
ccaggctcccatgtgtcccaagaggctgctgccttctcggtgcctgtgatgacccacagg
tggaaccgcttcgccatgattgtccagggtgaggaagtgaccctcctcgtgaactgtgag
gagcacagccgcatccccttccagcggtcctcccaggctttggcttttgagtccagcgct
ggaatcttcatgggcaatgcaggagctacagggctcgagagattcactggctccctccag
cagctcaccgtgcaccccgaccccaggactcccgaggagctgtgtgaccctgaagagtcc
tcggcatctggagagaccagtgggctgcaggaggcagacggagtagctgagatcttagaa
gccgtcacctacactcaagcctcgcccaaagaagcaaaagttgaacccataaacacacct
ccaactccatcctccccctttgaagacatggaactttctggtgaacctgtacccgagggg
accctggaaaccaccaacatgagcatcatccagcacagcagccccaaacaagggtctggt
gagatcctgaatgacacactggagggggttcattctgtggatggtgaccccattactgac
agcggctcaggggctggggccttccttgacattgctgaagaaaagaatttagcagcaaca
gcagcggggctggccgaggtgcccatcagcactgctggagaagcagaggccagcagtgtg
cccaccgggggaccaaccctctctatgtccacggagaacccagaggaaggggtcactcca
ggtccagataatgaagagcgtttagcagcaacagcagcaggggaggccgaggcactcgcc
agcatgcctggggaagtggaggccagtggtgtggcccccggggagctggacctctccatg
tccgcccagagcctcggggaagaggccactgtgggtccaagcagtgaagacagtttaaca
acagctgcagctgcaaccgaagtgtccctcagtacttttgaggatgaggaagccagtggg
gtccccacagatggcctggctcccctcacagccaccatggcccctgagcgggcagtcact
tctggtcctggtgatgaagaagacttggcagcagccacaacagaggagcccctcatcaca
gctgggggtgaagagtccggcagccctccccctgatgggccaccgctgcccctgcccaca
gtggctcctgaaagatggatcactccagctcaaagagaacatgtgggaatgaaaggacag
gctgggcccaaaggagaaaagggtgatgctggggaggagcttcctggccctcctgaacct
tctgggcctgttggacccacggcaggagcagaagcagagggctctggcctaggctggggc
tcggacgtcggctctggctctggtgacctggtgggcagtgagcagctgctgagaggtcct
ccaggacccccagggccacctggcttacctgggattccaggaaaaccaggaactgatgtt
ttcatgggaccccctggatctcctggagaggatggacctgctggtgaacctgggcccccg
ggccctgagggacagcctggagttgatggagccaccggccttcccgggatgaaaggggag
aagggagcaagagggcctaatggctcagttggtgaaaagggtgaccctggcaacagaggc
ttacctggacccccggggaaaaagggacaagctggccctcctggggtcatgggaccccca
gggcctcctggaccccctgggcccccaggccctggatgcacaatgggacttggattcgag
gataccgaaggctctggaagcacccagctattgaatgaacccaaactctccagaccaacg
gctgcaattggtctcaaaggagagaaaggagaccggggacccaagggagaaagggggatg
gatggagccagtattgtgggaccccctgggccgagagggccacctgggcacatcaaggtc
ttgtctaattccttgatcaatatcacccatggattcatgaatttctcggacattcctgag
ctggtggggcctccggggccggacgggttgcctgggctgccaggatttccaggtcctaga
ggaccaaaaggtgacactggtttacctggctttccaggactaaaaggagaacagggcgag
aagggagagccgggtgccatcctgacagaggacattcctctggaaaggctgatggggaaa
aagggtgaacctggaatgcatggagccccaggaccaatggggcccaaaggaccaccagga
cataaaggagaatttggccttcccgggcgacctggtcgcccaggactgaatggcctcaag
ggtaccaaaggagatccaggggtcattatgcagggcccacctggcttacctggccctcca
ggcccccctgggccacctggagctgtgattaacatcaaaggagccattttcccaataccc
gtccgaccacactgcaaaatgccagttgatactgctcatcctgggagtccagagctcatc
acttttcacggtgttaaaggagagaaaggatcctggggtcttcctggctcaaagggagaa
aaaggcgaccagggagcccagggaccaccaggtcctccacttgatctagcttacctgaga
cactttctgaacaacttgaagggggagaatggagacaaggggttcaaaggtgaaaaagga
gaaaaaggagacattaatggcagcttccttatgtctgggcctccaggcctgcccggaaat
ccaggcccggctggccaaaaaggggagacagtcgttgggccccaaggacccccaggtgct
cctggtctgcctgggccacctggctttggaagacctggtgatcctgggccaccggggccc
ccggggccaccaggacctccagctatcctgggagcagctgtggcccttccaggtccccct
ggccctccaggacagccagggcttcccggatccagaaacctggtcacagcattcagcaac
atggatgacatgctgcagaaagcgcatttggttatagaaggaacattcatctacctgagg
gacagcactgagtttttcattcgtgttagagatggctggaaaaaattacagctgggagaa
ctgatccccattcctgccgacagccctccaccccctgcgctttccagcaacccacatcag
cttctgcctccaccaaaccctatttcaagtgccaattatgagaagcctgctctgcatttg
gctgctctgaacatgccattttctggggacattcgagctgattttcagtgcttcaagcag
gccagagctgcaggactgttgtccacctaccgagcattcttatcttcccatttgcaagat
ctgtccaccattgtgaggaaagcagagagatacagccttcccatagtgaacctcaagggc
caagtactttttaataattgggactcaattttttctggccacggaggtcagttcaatatg
catattccaatatactcctttgatggtcgagacataatgacagatccttcttggccccag
aaagtcatttggcatggctccagcccccatggcgtccgccttgtggataactactgtgaa
gcatggcgaaccgcggacacagcggtcacgggacttgcctccccgctgagcacggggaag
attctggaccagaaagcatacagctgtgctaatcggctaattgtcctatgtatcgaaaac
agtttcatgacagacgctaggaagtaa
DBGET
integrated database retrieval system