Homo sapiens (human): 158401
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Entry
158401 CDS
T01001
Symbol
SHOC1, C9orf84, MZIP2, SPGF75, ZIP2, ZIP2H
Name
(RefSeq) shortage in chiasmata 1
KO
K28108
shortage in chiasmata 1
Organism
hsa
Homo sapiens (human)
Disease
H01282
Spermatogenic failure
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsa03036
]
158401 (SHOC1)
Chromosome and associated proteins [BR:
hsa03036
]
Eukaryotic type
Meiosis-specific proteins
Others
158401 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
158401
NCBI-ProteinID:
NP_001074020
OMIM:
618038
HGNC:
26535
Ensembl:
ENSG00000165181
UniProt:
Q5VXU9
Q6ZU10
LinkDB
All DBs
Position
9:complement(111686171..111794937)
Genome browser
AA seq
1405 aa
AA seq
DB search
MSETLGDELEILRGKMMQRRPRSAEVKYFYFFKILLRLRLAILKYLFIDDKGILFVSSRK
HLPTLPTLLSRLKLFLVKDPLLDFKGQIFTEANFSRECFSLQETLEAFVKEDFCMDKVNF
CQEKLEDTICLNEPSSFLIEYEFLIPPSLKPEIDIPSLSELKELLNPVPEIINYVDEKEK
LFERDLTNKHGIEDIGDIKFSSTEILTIQSQSEPEECSKPGELEMPLTPLFLTCQHSSVN
SLRTELQTFPLSPVCKINLLTAEESANEYYMMWQLERCRSPLNPFLLTVPRIQEPHSQYS
VTDLKKIFSVKEESLVINLEKAEWWKQAGLNLKMMETLEHLNTYLCHDNLSSNDTKIEIF
LPTKVLQLESCLEHKSHSSPIALIDEKSTNAHLSLPQKSPSLAKEVPDLCFSDDYFSDKG
AAKEEKPKNDQEPVNRIIQKKENNDHFELDCTGPSIKSPSSSIIKKASFEHGKKQENDLD
LLSDFIMLRNKYKTCTSKTEVTNSDEKHDKEACSLTLQEESPIVHINKTLEEINQERGTD
SVIEIQASDSQCQAFCLLEAAASPILKNLVSLCTLPTANWKFATVIFDQTRFLLKEQEKV
VSDAVRQGTIDEREMTFKHAALLHLLVTIRDVLLTCSLDTALGYLSKAKDIYNSILGPYL
GDIWRQLEIVQFIRGKKPETNYKIQELQCQILSWMQSQQQIKVLIIIRMDSDGEKHFLIK
ILNKIEGLTLTVLHSNERKDFLESEGVLRGTSSCVVVHNQYIGADFPWSNFSFVVEYNYV
EDSCWTKHCKELNIPYMAFKVILPDTVLERSTLLDRFGGFLLEIQIPYVFFASEGLLNTP
DILQLLESNYNISLVERGCSESLKLFGSSECYVVVTIDEHTAIILQDLEELNYEKASDNI
IMRLMALSLQYRYCWIILYTKETLNSEYLLTEKTLHHLALIYAALVSFGLNSEELDVKLI
IAPGVEATALIIRQIADHSLMTSKRDPHEWLDKSWLKVSPSEEEMYLLDFPCINPLVAQL
MLNKGPSLHWILLATLCQLQELLPEVPEKVLKHFCSITSLFKIGSSSITKSPQISSPQEN
RNQISTLSSQSSASDLDSVIQEHNEYYQYLGLGETVQEDKTTILNDNSSIMELKEISSFL
PPVTSYNQTSYWKDSSCKSNIGQNTPFLINIESRRPAYNSFLNHSDSESDVFSLGLTQMN
CETIKSPTDTQKRVSVVPRFINSQKRRTHEAKGFINKDVSDPIFSLEGTQSPLHWNFKKN
IWEQENHPFNLQYGAQQTACNKLYSQKGNLFTDQQKCLSDESEGLTCESSKDETFWRELP
SVPSLDLFRASDSNANQKEFNSLYFYQRAGKSLGQKRHHESSFNSGDKESLTGFMCSQLP
QFKKRRLAYEKVPGRVDGQTRLRFF
NT seq
4218 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagactctgggggatgaattggagatattaagaggtaaaatgatgcagagaaga
ccaaggtcagcagaagtcaaatacttctatttctttaaaattttgcttaggctacgcctg
gctattttgaagtatttatttattgatgataaaggaatactttttgtaagtagtagaaaa
cacctaccaactttgcctactctcttgagtagactaaaactgtttttggtaaaggatcct
cttttagatttcaaaggacagatcttcacagaagctaatttttccagggaatgtttctct
cttcaagaaactttggaagcttttgtgaaagaagatttttgtatggataaagtgaacttt
tgtcaagagaaactagaagatacaatatgtttaaatgagccgtcaagttttcttattgag
tatgaattcttaatacctccaagcctcaaaccagaaattgatattccatcactctcagaa
ctgaaggagttattaaacccagtgccagaaataataaactatgtagatgaaaaggaaaag
ctttttgaaagagatcttactaacaagcatggaattgaggatatcggggatataaaattc
agctccacagagattttgaccattcaaagccagagtgaaccagaagagtgcagtaaacca
ggagagttagaaatgccactaactcctctattcctaacatgccaacattcttcagtgaat
tcattacgtacagaacttcagacatttccattatctccggtttgtaaaattaatttgctt
actgctgaagaatcagctaatgaatactacatgatgtggcaattagaaagatgtagaagc
cctttgaacccatttttgcttacagtgccaagaattcaagagccccacagccaatattca
gttacagatttgaaaaagatattttctgttaaagaagaaagccttgtgattaatctggaa
aaggcagagtggtggaaacaagcaggactaaatctgaaaatgatggaaacattggaacat
ctgaatacatatttatgtcatgataatttgtcttctaatgacactaaaattgagatattt
ttgcctacgaaagtgcttcaattagaatcatgtctagaacataaaagtcattcttcacct
attgcacttattgatgaaaaatctacaaatgctcatttatcacttccacaaaagagtcca
tctctggcaaaagaagtaccagatctatgtttttctgatgactatttctctgataaagga
gcagcaaaagaagaaaaaccaaagaatgaccaagaaccagtaaacagaataatccaaaag
aaagaaaataacgatcactttgaacttgactgcacaggaccatctattaaatcaccttcc
tcttcaataattaaaaaagcatcttttgaacatggcaaaaaacaagagaatgatttggac
cttttgagcgactttattatgctgcgaaataaatataagacttgcacctcaaagactgaa
gtcacaaacagtgatgaaaaacatgataaagaagcatgttctttgacacttcaagaagaa
agtcctattgttcatattaataaaaccctggaggaaataaatcaggaaaggggaacagat
agtgtcattgaaattcaagcgtcagatagccagtgccaagcattttgcctcctcgaagca
gcagcttctcctatcttaaaaaaccttgtatccttgtgtaccctccctactgctaattgg
aaatttgccactgttatttttgaccaaacaaggtttctcttaaaggaacaagaaaaagta
gtaagtgatgctgttcgccaaggtacaattgatgaaagagaaatgactttcaagcatgcc
gctctcttacatcttctggtaacaattagagatgtccttttaacatgcagcttggacaca
gcattgggatatttgtcgaaggcaaaagatatctacaacagcattttaggcccctatttg
ggtgacatttggagacagctggagattgtacagtttattagggggaaaaagcctgaaacc
aactacaagatacaagaattgcaatgtcagatactaagttggatgcaaagtcaacagcaa
attaaggtactgattataataagaatggactcagacggtgaaaaacattttctcattaaa
attcttaacaaaatagaaggtttaacactgactgtccttcattcaaatgaaagaaaagat
tttctggaatctgaaggtgttttaaggggtacaagttcctgtgtagttgtacataatcaa
tatattggagcagatttcccctggagtaatttctcatttgtggtggaatacaattatgtg
gaagactcttgttggactaaacactgcaaagagttgaatattccttacatggcctttaaa
gtgattcttccagacacagttttagaaagaagcaccttgctggatagatttggaggtttt
cttttggaaattcagattccatatgtgttttttgcatctgaaggacttcttaatactcca
gacatacttcagctgctagaatccaactataacatctcactagtagagagaggctgcagt
gagtcattgaaactctttggaagttcagagtgttatgtagtggtgacaattgatgaacac
actgccataattttgcaggatctagaagaattgaattatgagaaggcatcagacaatatc
attatgaggctgatggcattatcattacagtacagatattgttggataattttatatacc
aaagaaacattaaattcagagtatctgcttacagaaaagacacttcatcacctagcactg
atttatgcagctttggtttcatttgggctaaactctgaagaactggatgtaaagcttata
attgccccaggagtagaagcaactgccttgataattcgacaaattgctgaccacagttta
atgacctcaaagagagatcctcatgaatggttggataaatcctggcttaaagtttcacca
tctgaggaagaaatgtacttacttgattttccatgtattaacccattggtggctcagctc
atgctaaataaaggaccttcactgcattggatattattagcaactctgtgtcaacttcag
gaactcctacctgaagtcccagaaaaagtgttaaagcatttttgtagcatcacttcccta
ttcaagattggttcttcttccataacaaaatcaccgcaaatttcgtcacctcaggaaaat
aggaatcagattagtaccttgtcttctcaaagttcagcttctgatttagactctgtcatt
caagaacataatgaatattatcagtatttaggattaggagagacagtgcaggaagacaaa
accaccattttgaatgacaactcttccattatggaactaaaagaaatctcaagtttttta
ccacctgtgacttcatacaatcagaccagctactggaaagactccagctgtaaatctaat
atagggcagaatactccttttctaattaatatagaatcaaggagaccggcttataactcc
tttctaaaccacagtgattcagagtcagatgtcttttctttgggtctaacacaaatgaac
tgtgaaactataaaatcaccaactgacactcagaagagagtgtcagttgtcccccgtttt
ataaattctcagaaaaggagaacacatgaagcaaaaggtttcataaataaagatgtatcg
gaccctatcttttcactagagggcactcaatctcctcttcattggaactttaagaaaaat
atatgggaacaagagaatcacccgttcaacttacaatatggtgcacagcagactgcatgt
aacaaattgtactctcagaaaggtaatttattcactgatcagcaaaaatgtctatcagat
gagtctgaaggcctcacatgtgaaagttcaaaagatgagactttctggagagaattacca
tctgtccccagtttggatttatttcgtgcttctgattctaatgcaaatcaaaaagaattc
aacagcctttatttctaccaaagagctggaaaaagtttaggacagaaaaggcaccatgaa
tcttcatttaactcaggagacaaggaatcattaacaggttttatgtgctcacaactacca
caattcaaaaaacgacgtctagcatatgaaaaagtccctggtagagttgatgggcagact
cggctgaggtttttttga
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