Homo sapiens (human): 168507
Help
Entry
168507 CDS
T01001
Symbol
PKD1L1, HTX8, PRO19563
Name
(RefSeq) polycystin 1 like 1, transient receptor potential channel interacting
KO
K04987
polycystin 1L1
Organism
hsa
Homo sapiens (human)
Disease
H00632
Heterotaxy
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hsa03037
]
168507 (PKD1L1)
04040 Ion channels [BR:
hsa04040
]
168507 (PKD1L1)
Cilium and associated proteins [BR:
hsa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
168507 (PKD1L1)
Ion channels [BR:
hsa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
168507 (PKD1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PLAT
PKD_4
PKD_channel
Glyco_trans_2_3
Ion_trans
Motif
Other DBs
NCBI-GeneID:
168507
NCBI-ProteinID:
NP_612152
OMIM:
609721
HGNC:
18053
Ensembl:
ENSG00000158683
UniProt:
Q8TDX9
LinkDB
All DBs
Position
7:complement(47774614..47960906)
Genome browser
AA seq
2849 aa
AA seq
DB search
MAEEAAQNISDDQERCLQAACCLSFGGELSVSTDKSWGLHLCSCSPPGGGLWVEVYANHV
LLMSDGKCGCPWCALNGKAEDRESQSPSSSASRQKNIWKTTSEAALSVVNEKTQAVVNEK
TQAPLDCDNSADRIPHKPFIIIARAWSSGGPRFHHRRLCATGTADSTFSALLQLQGTTSA
AAPCSLKMEASCCVLRLLCCAEDVATGLLPGTVTMETPTKVARPTQTSSQRVPLWPISHF
PTSPRSSHGLPPGIPRTPSFTASQSGSEILYPPTQHPPVAILARNSDNFMNPVLNCSLEV
EARAPPNLGFRVHMASGEALCLMMDFGDSSGVEMRLHNMSEAMAVTAYHQYSKGIFFHLL
HFQLDMSTYKEAETQNTTLNVYLCQSENSCLEDSDPSNLGYELISAFVTKGVYMLKAVIY
NEFHGTEVELGPYYVEIGHEAVSAFMNSSSVHEDEVLVFADSQVNQKSTVVIHHFPSIPS
YNVSFISQTQVGDSQAWHSMTVWYKMQSVSVYTNGTVFATDTDITFTAVTKETIPLEFEW
YFGEDPPVRTTSRSIKKRLSIPQWYRVMVKASNRMSSVVSEPHVIRVQKKIVANRLTSPS
SALVNASVAFECWINFGTDVAYLWDFGDGTVSLGSSSSSHVYSREGEFTVEVLAFNNVSA
STLRQQLFIVCEPCQPPLVKNMGPGKVQIWRSQPVRLGVTFEAAVFCDISQGLSYTWNLM
DSEGLPVSLPAAVDTHRQTLILPSHTLEYGNYTALAKVQIEGSVVYSNYCVGLEVRAQAP
VSVISEGTHLFFSRTTSSPIVLRGTQSFDPDDPGATLRYHWECATAGSPAHPCFDSSTAH
QLDAAAPTVSFEAQWLSDSYDQFLVMLRVSSGGRNSSETRVFLSPYPDSAFRFVHISWVS
FKDTFVNWNDELSLQAMCEDCSEIPNLSYSWDLFLVNATEKNRIEVPFCRVVGLLGSLGL
GAISESSQLNLLPTEPGTADPDATTTPFSREPSPVTLGQPATSAPRGTPTEPMTGVYWIP
PAGDSAVLGEAPEEGSLDLEPGPQSKGSLMTGRSERSQPTHSPDPHLSDFEAYYSDIQEA
IPSGGRQPAKDTSFPGSGPSLSAEESPGDGDNLVDPSLSAGRAEPVLMIDWPKALLGRAV
FQGYSSSGITEQTVTIKPYSLSSGETYVLQVSVASKHGLLGKAQLYLTVNPAPRDMACQV
QPHHGLEAHTVFSVFCMSGKPDFHYEFSYQIGNTSKHTLYHGRDTQYYFVLPAGEHLDNY
KVMVSTEITDGKGSKVQPCTVVVTVLPRYHGNDCLGEDLYNSSLKNLSTLQLMGSYTEIR
NYITVITRILSRLSKEDKTASCNQWSRIQDALISSVCRLAFVDQEEMIGSVLMLRDLVSF
SNKLGFMSAVLILKYTRALLAQGQFSGPFVIDKGVRLELIGLISRVWEVSEQENSKEEVY
RHEEGITVISDLLLGCLSLNHVSTGQMEFRTLLHYNLQSSVQSLGSVQVHLPGDLAGHSP
AGAETQSPCYISQLILFKKNPYPGSQAPGQIGGVVGLNLYTCSSRRPINRQWLRKPVMVE
FGEEDGLDNRRNKTTFVLLRDKVNLHQFTELSENPQESLQIEIEFSKPVTRAFPVMLLVR
FSEKPTPSDFLVKQIYFWDESIVQIYIPAASQKDASVGYLSLLDADYDRKPPNRYLAKAV
NYTVHFQWIRCLFWDKREWKSERFSPQPGTSPEKVNCSYHRLAAFALLRRKLKASFEVSD
ISKLQSHPENLLPSIFIMGSVILYGFLVAKSRQVDHHEKKKAGYIFLQEASLPGHQLYAV
VIDTGFRAPARLTSKVYIVLCGDNGLSETKELSCPEKPLFERNSRHTFILSAPAQLGLLR
KIRLWHDSRGPSPGWFISHVMVKELHTGQGWFFPAQCWLSAGRHDGRVERELTCLQGGLG
FRKLFYCKFTEYLEDFHVWLSVYSRPSSSRYLHTPRLTVSFSLLCVYACLTALVAAGGQE
QPHLDVSPTLGSFRVGLLCTLLASPGAQLLSLLFRLSKEAPGSARVEPHSPLRGGAQTEA
PHGPNSWGRIPDAQEPRKQPASAILSGSGRAQRKAASDNGTACPAPKLQVHGADHSRTSL
MGKSHCCPPHTQAPSSGLEGLMPQWSRALQPWWSSAVWAICGTASLACSLGTGFLAYRFG
QEQCVQWLHLLSLSVVCCIFITQPLMVCLMALGFAWKRRADNHFFTESLCEATRDLDSEL
AERSWTRLPFSSSCSIPDCAGEVEKVLAARQQARHLRWAHPPSKAQLRGTRQRMRRESRT
RAALRDISMDILMLLLLLCVIYGRFSQDEYSLNQAIRKEFTRNARNCLGGLRNIADWWDW
SLTTLLDGLYPGGTPSARVPGAQPGALGGKCYLIGSSVIRQLKVFPRHLCKPPRPFSALI
EDSIPTCSPEVGGPENPYLIDPENQNVTLNGPGGCGTREDCVLSLGRTRTEAHTALSRLR
ASMWIDRSTRAVSVHFTLYNPPTQLFTSVSLRVEILPTGSLVPSSLVESFSIFRSDSALQ
YHLMLPQLVFLALSLIHLCVQLYRMMDKGVLSYWRKPRNWLELSVVGVSLTYYAVSGHLV
TLAGDVTNQFHRGLCRAFMDLTLMASWNQRARWLRGILLFLFTLKCVYLPGIQNTMASCS
SMMRHSLPSIFVAGLVGALMLAALSHLHRFLLSMWVLPPGTFTDAFPGLLFHFPRRSQKD
CLLGLSKSDQRAMACYFGILLIVSATLCFGMLRGFLMTLPQKRKSFQSKSFVRLKDVTAY
MWEKVLTFLRLETPKLEEAEMVENHNYYLDEFANLLDELLMKINGLSDSLQLPLLEKTSN
NTGEARTEESPLVDISSYQAAEPADIKDF
NT seq
8550 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggaggcagcccagaacatttctgatgaccaggaaaggtgtctccaggctgcc
tgctgcctttcctttggtggtgagctgtctgtgagcactgacaagagctggggtcttcat
ctgtgcagctgtagccctcctggaggtggattgtgggtcgaggtctatgctaatcatgtg
cttcttatgagtgatgggaagtgtggctgtccttggtgtgctctgaatggaaaggcagaa
gaccgggaatcacagagcccatcctcatcagcttccaggcagaagaacatttggaaaaca
actagtgaagcagcgttaagtgttgttaatgaaaaaacacaggctgttgttaatgaaaaa
acacaggcgcctctggattgtgataacagtgctgatagaattccccacaaacctttcatt
ataatcgcaagggcctggagcagtggtggccccaggttccatcacaggcggctgtgtgct
actgggaccgcagacagcacattctctgctcttctccagctccagggcaccacttctgca
gcagctccctgcagcctgaagatggaggcttcctgctgtgtcctgagactgctgtgctgt
gcggaggatgtggccacggggctgcttcctgggactgtcacgatggagacccccaccaag
gtggccagacccactcagaccagctcccagcgagtgcccctgtggccgatttcacatttt
cccacttctcccagaagctcccacggccttccgcctggcattcctcgcacccccagcttc
acggcatcgcagtctggttctgagatcctctatccccctactcagcatcctcctgtggcc
atcctagctcgaaattctgataacttcatgaaccctgttcttaattgctccctggaagtg
gaagctcgggcacctccaaatctgggattccgtgttcatatggcttctggagaggctctc
tgtctgatgatggatttcggggacagttctggggttgaaatgaggctacacaacatgtct
gaggcaatggcggtgactgcctaccaccagtactcaaaaggtattttttttcatctttta
cattttcagttggatatgtccacctacaaagaagcagagacacaaaatacaactttaaat
gtttacttgtgccaaagtgaaaacagctgcctggaagactcagaccccagtaaccttgga
tatgagcttatttctgcctttgtcaccaaaggagtctatatgctcaaggctgttatttat
aacgagtttcatggaaccgaagtggagcttgggccttattatgtggagattggccatgag
gccgtgtctgcgttcatgaactccagcagtgtccatgaagatgaagtgcttgtctttgct
gactcccaagtgaatcagaaaagcactgtggttatacatcactttccatctattccttca
tataacgtgtcctttatttctcagactcaagtgggtgacagccaggcttggcacagcatg
actgtctggtataagatgcaatccgtctctgtctacacaaatggaactgtgtttgccaca
gacacagacattacatttacagctgttaccaaggaaacaatacccctggaatttgagtgg
tattttggagaggatccaccagtgaggacaacttcaagaagcattaaaaaaagactcagc
atcccccaatggtatcgtgtgatggttaaggcttccaacaggatgagcagtgtggtctct
gagccccatgtcatcagggtgcagaagaaaattgtggccaatcggctcacgtccccctcc
tcagctctggtaaatgccagtgtggcctttgagtgctggatcaacttcggcacagatgtt
gcctacctgtgggactttggggatggcaccgtcagcctggggagcagctccagcagccat
gtctacagtagggaaggagaatttacagtggaggtccttgccttcaataatgtcagtgcc
tccactctaagacagcaacttttcatcgtgtgcgagccctgccagccacccctggtgaag
aacatggggcctgggaaagtccagatatggaggtctcagcctgtgaggctgggagtgacg
tttgaagctgcagtcttctgtgatatttcccaaggtctttcttacacctggaacttgatg
gactctgaagggctccctgtctccctccctgctgctgtggacactcacagacagaccctc
atcctcccgagccacaccttggagtatgggaactacactgcccttgccaaggttcagatt
gaaggcagtgtggtgtacagcaactactgtgtgggcctggaggtgcgagcccaggcccct
gtcagtgtgatctccgagggcacacacctattcttctccaggaccacctcatcccccatt
gtcctcagagggacccagtccttcgaccctgacgaccctggggcgactctcaggtatcac
tgggaatgcgccaccgctggctccccagcacatccctgcttcgactcctccactgcacac
caactggatgccgcggctcccactgtttcctttgaggcacaatggctcagtgacagctat
gatcagttccttgtgatgctgagggtctccagtggtggccggaactcttctgagacccgg
gtgttcctgtccccctaccctgactcggcgttcagattcgtccacatctcctgggtcagc
tttaaagacaccttcgtcaactggaatgacgaactctctcttcaagctatgtgtgaggac
tgcagtgaaataccgaatctgtcttattcctgggatctctttttagtcaatgcaacagaa
aagaataggatagaagttcccttctgcagagtagtggggctgcttggctcgctgggactc
ggtgccatttcagagtcatcacagttaaacctgctgcccactgagcctggcactgcagat
cctgatgcaacgaccacaccattctcacgggaaccttcacccgtgacccttggccaacct
gccacttcagctccaaggggaacccccacagagcccatgactggagtctactggattcct
cctgcgggggactctgcagtcctgggggaggctccagaggaaggttcactagacctagag
ccagggccacagagcaagggatccctgatgactggccgctctgagagaagtcagcccacc
cacagccctgaccctcacctctctgattttgaagcctattacagtgacattcaagaagca
ataccatcgggaggaagacagccagctaaggacaccagctttccaggatcaggacctagc
ttgagtgccgaggagagccctggagatggggataacctggtggacccctccctgtctgca
ggcagagccgagcctgtcctcatgattgactggcccaaggccctgctgggtcgagcagtt
ttccaaggctattcatcctcaggtattacagaacagacagtgacaatcaagccatactct
ctgagcagtggagagacgtacgtcctgcaagtgtctgtggcttcgaagcatggcttactg
ggtaaagctcagctgtacttgacagtcaacccggctcctcgggacatggcctgtcaggtg
cagccccaccatggtctggaagcacacaccgtcttcagtgtcttctgcatgtctggaaaa
ccggacttccattatgaatttagttaccagataggaaacacctccaaacacactttgtac
catgggagagacacccagtattattttgtgttgccagctggtgagcacttggacaattac
aaagtcatggtttccactgaaatcacagatggcaaaggctccaaggtccagccgtgcact
gtggtggtgactgtgctgccccgctaccatggaaatgactgtctgggcgaggacctgtat
aattccagcctgaaaaacctttctaccctccagctgatggggagttacacagaaatcagg
aactacatcactgtgatcaccagaatcctgagtcgtttgtctaaggaggacaaaactgcc
tcctgcaaccaatggtcacgaatacaggatgcattaatttcttcagtatgcagattggct
tttgtagatcaggaagaaatgattggttctgttcttatgttgagggacctcgtgagcttc
tctaataagctaggctttatgagtgcggttctcatcctcaagtacacccgggcactcctt
gctcaaggccagttctcggggccatttgtgattgacaaaggagtgaggcttgagctcatc
ggtctcatatccagagtctgggaagtctctgagcaagaaaactcgaaggaggaagtctat
cgacatgaagaaggaattacagtcatctcagatttattgttgggttgtctctctttgaac
catgttagcactgggcagatggagttccggacccttcttcattacaaccttcagagctct
gtccagagcctgggatctgtccaggtgcatttacctggtgaccttgctgggcacagtcct
gctggggcggagacacagagcccatgctacattagccagctcatactcttcaagaagaac
ccatatccagggagccaagctcctgggcagattggtggagttgtgggcctcaacctctat
acctgctccagcagaagacccatcaacaggcaatggctaaggaaacccgtgatggtcgag
tttggggaggaggatggcctggataataggagaaataaaacgacatttgtattacttcgg
gataaagtgaatctccatcagttcactgagctttccgaaaacccccaggaatctctacag
atagaaattgaattttccaaacctgttacaagggcatttcccgtcatgttgctagtaaga
ttctctgagaaacctactccctctgattttcttgtgaagcagatctacttctgggatgag
tcaattgtgcagatttatatacctgctgcttctcagaaagatgccagtgtaggctattta
tccttattggatgctgactatgacagaaaacctccaaacagatatttagctaaggcagtg
aactatacagtacatttccagtggatccgatgcctgttttgggacaagagagagtggaaa
tctgaacgtttctctccacaaccagggacttctcctgaaaaagtgaactgcagctaccat
cgcctcgcggcattcgctctcctaaggagaaagctgaaggccagttttgaagtgagtgac
atttccaagctacagagccacccagaaaacttgcttcccagtatttttattatgggttct
gtgattctttatggatttttggtcgctaaaagtagacaagtagatcatcatgaaaaaaag
aaagctggttacatctttctgcaagaagcttccctgccgggccatcagctatatgcggtc
gtcattgacactggcttccgagctccggccaggttgacctcaaaggtgtacattgtttta
tgtggcgacaatggactgtcagaaaccaaggagctctcctgtccagagaagcccctgttt
gaaaggaattccagacacacctttatcctgagcgctcctgcccaactgggcctgctgagg
aagatccgcctctggcacgacagccgtgggccttccccaggctggttcatcagccacgtg
atggtgaaggagctgcacacgggacagggctggttcttccctgcccagtgctggctgtct
gccggcaggcatgatggtcgcgtggagcgggagctcacctgtctgcaagggggactcggc
ttccggaagcttttctattgcaagttcacagagtacctggaggatttccatgtctggctg
tcggtgtacagcaggccctcctccagccgctacctgcacacgccgcgcctcaccgtgtcc
ttctccctgctgtgcgtctacgcgtgtctcactgccctggttgctgctggagggcaagag
cagccccacttggacgtcagccccacccttggatccttcagggtgggtctcctgtgtacc
ctcctggcttctccaggggcccagctcttgtccctgctcttcaggctcagcaaggaagcc
ccggggtctgcccgagtggagccacacagcccacttagaggaggagcacagaccgaggca
ccccatggtcctaattcctggggaaggataccagacgcacaggagccacgcaagcaacct
gcatcagccattctctctgggagtggcagggcccaaaggaaggcggcaagtgacaatggc
acagcttgtccagcccctaagctgcaggttcatggggctgaccacagcaggacttctctg
atggggaaaagccactgctgccctccccacactcaagcacccagcagtggtttggaggga
ctaatgccccagtggtcaagggcccttcagccttggtggagctctgcagtgtgggccatt
tgtgggaccgcttctttggcctgcagtttggggacaggatttctagcctacaggtttggc
caggagcaatgtgtgcagtggctgcacctgctgtccctctccgtggtctgctgtattttc
atcacccagccacttatggtatgcctcatggccttgggttttgcttggaaaagaagagct
gacaaccacttttttactgagtctttatgtgaggctaccagggatctggactctgaattg
gcagaacgttcctggactcgcctccccttctcttcaagctgcagtattcctgactgtgca
ggcgaggttgaaaaagtcttggctgcccgacaacaagctcgccacctgcgctgggcgcat
ccaccatccaaggcccagctgaggggcaccagacagaggatgaggagagagagtcgcaca
cgggctgccctgagagacatttccatggacatcctcatgctgcttctgcttttgtgtgta
atatatgggagattttcccaagatgaatactccctcaatcaagctatccggaaagaattt
acaagaaatgccagaaactgcttgggtggcctgagaaacatcgctgactggtgggactgg
agtctgaccacacttctggatggcctgtacccgggaggcaccccgtcagcccgtgtgccg
ggggctcagcctggagctcttggaggaaaatgctacctaataggcagttccgtaattagg
cagctaaaagtttttcctaggcatttatgcaagcctcccaggccattttcagcactcatc
gaagactctattcctacatgtagtcccgaagttggaggccctgagaacccctacctgata
gacccagagaaccaaaacgtgaccctgaatggtcctgggggctgtgggacaagggaggac
tgtgtgctcagcctgggcagaacaaggactgaagcccacacagccctgtcccgactcagg
gccagcatgtggattgaccgcagcaccagggctgtgtctgtgcacttcactctctataac
cctccaacccaactcttcaccagcgtgtccctgagagtggagatcctccctacggggagt
ctcgtcccctcatccctggtggagtcattcagcatcttccgcagcgactcagccctgcag
taccacctcatgcttccccagctggtcttcctggcactcagcctgatccacctctgtgtt
caactctaccgtatgatggacaagggcgtcctcagctactggcgaaagccaaggaactgg
ctggagctctccgtggttggagtgagcctcacctactatgcagtttccggccaccttgtt
actcttgctggagatgtcactaaccagtttcacagaggactttgccgagcatttatggac
ctcacccttatggcatcatggaatcagagggctcgatggctccggggaatcctcttattc
ctcttcacattaaaatgcgtctatcttcctggcattcaaaacacaatggcatcctgctcc
tccatgatgcgccactcactccccagcatctttgtagcagggctggtgggggcactgatg
ctggccgccctctcccacctgcaccgatttctgctctctatgtgggttctaccacctggc
accttcacagacgccttccccgggctgctgtttcattttcccagaagaagccaaaaagac
tgcctccttggcctttccaagtctgaccagcgggccatggcttgttactttgggatcctt
ttaatagtctctgccacactgtgttttggaatgctgagaggttttctcatgactttaccc
caaaaaagaaaatcttttcaaagtaaatcttttgtgagacttaaagatgtcactgcttat
atgtgggaaaaggtcctcacctttctgagactggaaacaccaaagttggaagaggctgag
atggttgagaatcacaattactacttggatgaatttgcaaatctgttagacgaacttctg
atgaagattaatggtttgtccgacagcctacaactcccccttctggaaaaaacatccaac
aacacaggggaggcaaggacagaagagagtcccttagtggacatttctagttaccaagct
gctgagccagcagacatcaaggacttctga
DBGET
integrated database retrieval system
