Homo sapiens (human): 169044
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Entry
169044 CDS
T01001
Symbol
COL22A1
Name
(RefSeq) collagen type XXII alpha 1 chain
KO
K16630
collagen type XXII alpha
Organism
hsa
Homo sapiens (human)
Pathway
hsa04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
169044 (COL22A1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
VWA
VWA_2
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
169044
NCBI-ProteinID:
NP_690848
OMIM:
610026
HGNC:
22989
Ensembl:
ENSG00000169436
UniProt:
Q8NFW1
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Position
8:complement(138588235..138914041)
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AA seq
1626 aa
AA seq
DB search
MAGLRGNAVAGLLWMLLLWSGGGGCQAQRAGCKSVHYDLVFLLDTSSSVGKEDFEKVRQW
VANLVDTFEVGPDRTRVGVVRYSDRPTTAFELGLFGSQEEVKAAARRLAYHGGNTNTGDA
LRYITARSFSPHAGGRPRDRAYKQVAILLTDGRSQDLVLDAAAAAHRAGIRIFAVGVGEA
LKEELEEIASEPKSAHVFHVSDFNAIDKIRGKLRRRLCENVLCPSVRVEGDRFKHTNGGT
KEITGFDLMDLFSVKEILGKRENGAQSSYVRMGSFPVVQSTEDVFPQGLPDEYAFVTTFR
FRKTSRKEDWYIWQVIDQYSIPQVSIRLDGENKAVEYNAVGAMKDAVRVVFRGSRVNDLF
DRDWHKMALSIQAQNVSLHIDCALVQTLPIEERENIDIQGKTVIGKRLYDSVPIDFDLQR
IVIYCDSRHAELETCCDIPSGPCQVTVVTEPPPPPPPQRPPTPGSEQIGFLKTINCSCPA
GEKGEMGVAGPMGLPGPKGDIGAIGPVGAPGPKGEKGDVGIGPFGQGEKGEKGSLGLPGP
PGRDGSKGMRGEPGELGEPGLPGEVGMRGPQGPPGLPGPPGRVGAPGLQGERGEKGTRGE
KGERGLDGFPGKPGDTGQQGRPGPSGVAGPQGEKGDVGPAGPPGVPGSVVQQEGLKGEQG
APGPRGHQGAPGPPGARGPIGPEGRDGPPGLQGLRGKKGDMGPPGIPGLLGLQGPPGPPG
VPGPPGPGGSPGLPGEIGFPGKPGPPGPTGPPGKDGPNGPPGPPGTKGEPGERGEDGLPG
KPGLRGEIGEQGLAGRPGEKGEAGLPGAPGFPGVRGEKGDQGEKGELGLPGLKGDRGEKG
EAGPAGPPGLPGTTSLFTPHPRMPGEQGPKGEKGDPGLPGEPGLQGRPGELGPQGPTGPP
GAKGQEGAHGAPGAAGNPGAPGHVGAPGPSGPPGSVGAPGLRGTPGKDGERGEKGAAGEE
GSPGPVGPRGDPGAPGLPGPPGKGKDGEPGLRGSPGLPGPLGTKAACGKVRGSENCALGG
QCVKGDRGAPGIPGSPGSRGDPGIGVAGPPGPSGPPGDKGSPGSRGLPGFPGPQGPAGRD
GAPGNPGERGPPGKPGLSSLLSPGDINLLAKDVCNDCPPGPPGLPGLPGFKGDKGVPGKP
GREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGHPGVPGFMGPPGNP
GPPGADGIAGAAGPPGIQGSPGKEGPPGPQGPSGLPGIPGEEGKEGRDGKPGPPGEPGKA
GEPGLPGPEGARGPPGFKGHTGDSGAPGPRGESGAMGLPGQEGLPGKDGDTGPTGPQGPQ
GPRGPPGKNGSPGSPGEPGPSGTPGQKGSKGENGSPGLPGFLGPRGPPGEPGEKGVPGKE
GVPGKPGEPGFKGERGDPGIKGDKGPPGGKGQPGDPGIPGHKGHTGLMGPQGLPGENGPV
GPPGPPGQPGFPGLRGESPSMETLRRLIQEELGKQLETRLAYLLAQMPPAYMKSSQGRPG
PPGPPGKDGLPGRAGPMGEPGRPGQGGLEGPSGPIGPKGERGAKGDPGAPGVGLRGEMGP
PGIPGQPGEPGYAKDGLPGIPGPQGETGPAGHPGLPGPPGPPGQCDPSQCAYFASLAARP
GNVKGP
NT seq
4881 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctccgagggaacgctgtggctggcctcctctggatgctgctgctgtggagt
gggggcggcggctgccaggctcagcgggcaggttgcaaaagtgtccactacgatctggtc
ttcctcctggacacctcctccagcgtgggcaaggaggactttgagaaggtccggcagtgg
gtggccaacctggtggacaccttcgaggtgggccccgaccgcacccgtgtgggggtcgtg
cgctacagcgaccggcccaccacggccttcgagttgggactctttggctcgcaggaggag
gtcaaggcggctgcccggcgtctcgcctaccacgggggcaacaccaacacgggagacgcg
ctccgctacatcacggcccgcagcttctccccacacgccggcggccgccccagggaccgc
gcctacaagcaggtggccatcctgctcaccgacggccgcagccaggacctggtgctggac
gccgcggcggcagcccaccgcgctggcatccgcatctttgccgtgggcgtgggcgaggca
ctcaaggaggagctggaggagatcgcctcagagcccaagtccgcccacgtcttccacgtg
tccgacttcaatgccatcgacaagatccggggcaagctgcggcgccgtctttgtgaaaat
gtgctctgtcctagcgttcgtgtagaaggagatcgctttaagcacaccaatggaggaacc
aaggaaatcacaggttttgacctgatggatttgttcagtgtgaaggaaatcttggggaag
agagagaatggagctcagagttcctatgtacggatgggatccttccctgtggtgcaaagt
actgaggatgtgttcccccaaggtttacctgatgagtacgcctttgtcacaaccttccgg
ttcaggaaaacctctcggaaggaagactggtatatctggcaggtcatcgaccagtacagc
atcccacaggtctccatccggctggatggtgaaaacaaggcagtcgagtacaacgctgtg
ggtgccatgaaagatgctgtcagggtggtcttccgaggttctcgggtcaatgacctcttt
gaccgggactggcacaagatggccctgagcatccaggcccagaacgtctccctgcacatt
gactgtgcgctggtgcagacactacccatcgaggaacgggagaacattgacatccagggc
aagactgtgattggcaagcgcctctacgacagtgtgcccattgactttgacctacagcgg
attgtgatctattgtgactcgagacacgcagaattggagacttgttgtgatatcccctcg
ggtccgtgccaggtgaccgtggtgacagagcctccacctccacccccaccccagcggcct
cccaccccaggcagtgaacagattgggtttttgaagaccatcaactgctcctgcccagct
ggagagaagggtgaaatgggagttgctggccccatggggctccctggtccaaagggagac
ataggagccattgggccggttggcgctcctggacctaagggagagaaaggtgatgtgggc
ataggaccttttggccaaggggaaaagggtgaaaagggttccctgggcctgcccggcccc
cctgggagagacggcagcaaaggcatgagaggggagccaggagagctgggagagccgggg
ctgccgggtgaggtcggcatgcgggggccccaaggaccacctggactccccggacctcct
ggacgtgtcggagctcctggtctccaaggagaacgaggtgaaaagggaactcgaggagaa
aagggagagcgaggcctggatggattccctgggaagcctggggacacaggacagcagggc
aggcccggcccttctggtgtggcaggaccccagggagaaaagggtgacgtgggacctgcg
gggccacctggtgtaccaggctcagtggtgcagcaagagggcttgaaaggggaacaggga
gctccaggacccagaggtcaccaaggcgcccccggtcctccaggagctcggggtccaata
ggcccagaaggcagggatggacctcctggtttgcaaggtctccgagggaagaaaggtgac
atgggaccacctggaatccctggattgctggggctgcagggccctccaggaccccctggt
gtcccaggcccccctggaccgggaggttctccgggtttgcctggagagatcggcttcccg
ggaaagcctggacctcctgggcccacgggaccccctggaaaggacgggccaaatggacca
ccaggtccgccaggaaccaagggagaaccaggagaaagaggggaagatggtctgcctgga
aaaccaggccttcggggagaaattggggagcagggcctggcaggccgacctggagagaag
ggagaagcaggcctcccaggggctccaggcttcccaggtgtgagaggagagaaaggagac
cagggagaaaaaggtgaactgggacttccaggactgaaaggtgaccgaggtgaaaagggt
gaagctggtcctgcaggccctcccgggttacctggaactacatccctgttcacaccacat
ccacggatgcccggagaacaagggcccaaaggagagaagggcgatccaggcctgcctggg
gaaccgggactgcagggccgtcctggagaattggggcctcagggacccactggaccaccg
ggtgccaagggacaggaaggtgcacatggggctcctggagcagctggaaaccccggtgct
cccggacatgtcggtgcccccggtcccagtggccctccaggaagtgtgggtgctcccggc
ctcagaggcaccccagggaaagatggggagcgtggtgagaagggtgcagcgggggaagaa
ggcagcccagggccagttggtcccaggggagatcctggtgctcctgggctccctgggcca
cccggaaaagggaaggatggagagccgggactccgtggatcacctggactccctggaccc
ctaggaaccaaggctgcttgcggaaaagtcagagggtcagaaaactgtgcactgggaggg
caatgtgttaagggggatcgaggagctcctgggatccctggttctcctggcagccgtggt
gacccaggcattggggttgctggccctcctggcccttccggaccaccaggagacaaagga
tccccgggatcacgaggcttacctggattccctggcccccagggcccagccggccgggac
ggtgcaccaggaaatccaggagaaagagggcctcctggcaagccgggcctctcttcacta
ctgtctccaggggacataaatctcttggctaaggatgtgtgcaatgactgccctcctggc
cccccaggcctccctggtctaccaggttttaaaggggacaaaggtgtcccaggaaagcca
gggagagaaggcacagaagggaaaaagggagaggctgggcctccaggcctaccagggccc
ccaggaatagctggaccacagggaagtcaaggagaacgtggtgcagatggtgaggttggg
cagaaaggtgatcagggtcatcctggagttccaggtttcatggggcccccagggaaccct
gggccaccaggggcagatggaattgcaggagctgctggaccaccaggaatccaagggtca
cctgggaaagaaggccctcctggcccccaaggcccatctggattacccggaatcccagga
gaagaaggcaaagagggcagagatggaaagccgggtccccctggagagccgggcaaagca
ggagagccaggtctaccaggaccagagggtgcccgaggcccacctggcttcaagggacac
acaggcgattctggtgcacccggtccccggggagagtctggtgccatggggcttcctggt
caggaagggttaccaggaaaagatggtgacactggacccactgggccacagggtccccaa
ggaccaaggggcccaccgggcaagaatggatcaccgggatctccaggagagcctggccct
tcaggaacccctggccagaaaggaagcaaaggggaaaatggcagcccaggacttcctggc
ttcctgggtccccgtgggcctccgggagaaccaggagagaaaggagtcccaggcaaggag
ggggtccctgggaagcctggagagcctggattcaaaggagaaaggggagatcctgggatc
aaaggtgacaaaggacctcctggtggaaaaggccagcctggggaccctggaatcccaggc
cacaaaggccacacaggcctgatgggtccccaaggactacctggggagaatggaccagtt
ggacccccagggcctccaggccagccgggatttccaggactgaggggggagtctccatcc
atggaaaccctgcgtcggcttattcaagaagagctggggaagcagcttgaaaccagactc
gcctacctcctggcccagatgcccccggcgtacatgaagtcatctcaaggcagacctggg
cccccagggccccctggaaaagatgggcttccaggccgggccggccccatgggggagcca
ggtcgtcctgggcaggggggtctggaaggaccctctggacccataggtcccaaaggtgag
cgaggagccaaaggtgacccaggtgcacctggagttggcctccgaggcgagatgggaccc
cctggaatcccaggtcaacccggggaacctggctatgctaaagatggacttcctgggatc
cctggccctcaaggggagacaggaccagctggacatcctggcctcccaggacctcccggt
cccccaggccaatgtgacccttcccagtgtgcctacttcgccagccttgctgcccggccg
ggtaatgtgaagggtccctaa
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