Entry |
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Symbol |
PDCD11, ALG-4, ALG4, NFBP, RRP5
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Name |
(RefSeq) programmed cell death 11
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KO |
K14792 | rRNA biogenesis protein RRP5 |
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Organism |
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Brite |
KEGG Orthology (KO) [BR:hsa00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:hsa03009]
22984 (PDCD11)
Ribosome biogenesis [BR:hsa03009]
Eukaryotic type
90S particles
Other 90S particles
22984 (PDCD11)
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SSDB |
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Motif |
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Other DBs |
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Structure |
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LinkDB |
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Position |
10:103396626..103446294
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AA seq |
1871 aa
MANLEESFPRGGTRKIHKPEKAFQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKIE
KRESSKSAREKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICDAYT
KKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNRVLS
AEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLPLLKAQEYIRQKNKGAKLKVGQYLN
CIVEKVKGNGGVVSLSVGHSEVSTAIATEQQSWNLNNLLPGLVVKAQVQKVTPFGLTLNF
LTFFTGVVDFMHLDPKKAGTYFSNQAVRACILCVHPRTRVVHLSLRPIFLQPGRPLTRLS
CQNLGAVLDDVPVQGFFKKAGATFRLKDGVLAYARLSHLSDSKNVFNPEAFKPGNTHKCR
IIDYSQMDELALLSLRTSIIEAQYLRYHDIEPGAVVKGTVLTIKSYGMLVKVGEQMRGLV
PPMHLADILMKNPEKKYHIGDEVKCRVLLCDPEAKKLMMTLKKTLIESKLPVITCYADAK
PGLQTHGFIIRVKDYGCIVKFYNNVQGLVPKHELSTEYIPDPERVFYTGQVVKVVVLNCE
PSKERMLLSFKLSSDPEPKKEPAGHSQKKGKAINIGQLVDVKVLEKTKDGLEVAVLPHNI
RAFLPTSHLSDHVANGPLLHHWLQAGDILHRVLCLSQSEGRVLLCRKPALVSTVEGGQDP
KNFSEIHPGMLLIGFVKSIKDYGVFIQFPSGLSGLAPKAIMSDKFVTSTSDHFVEGQTVA
AKVTNVDEEKQRMLLSLRLSDCGLGDLAITSLLLLNQCLEELQGVRSLMSNRDSVLIQTL
AEMTPGMFLDLVVQEVLEDGSVVFSGGPVPDLVLKASRYHRAGQEVESGQKKKVVILNVD
LLKLEVHVSLHQDLVNRKARKLRKGSEHQAIVQHLEKSFAIASLVETGHLAAFSLTSHLN
DTFRFDSEKLQVGQGVSLTLKTTEPGVTGLLLAVEGPAAKRTMRPTQKDSETVDEDEEVD
PALTVGTIKKHTLSIGDMVTGTVKSIKPTHVVVTLEDGIIGCIHASHILDDVPEGTSPTT
KLKVGKTVTARVIGGRDMKTFKYLPISHPRFVRTIPELSVRPSELEDGHTALNTHSVSPM
EKIKQYQAGQTVTCFLKKYNVVKKWLEVEIAPDIRGRIPLLLTSLSFKVLKHPDKKFRVG
QALRATVVGPDSSKTLLCLSLTGPHKLEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSI
FHMSDSYSETPLEDFVPQKVVRCYILSTADNVLTLSLRSSRTNPETKSKVEDPEINSIQD
IKEGQLLRGYVGSIQPHGVFFRLGPSVVGLARYSHVSQHSPSKKALYNKHLPEGKLLTAR
VLRLNHQKNLVELSFLPGDTGKPDVLSASLEGQLTKQEERKTEAEERDQKGEKKNQKRNE
KKNQKGQEEVEMPSKEKQQPQKPQAQKRGGRECRESGSEQERVSKKPKKAGLSEEDDSLV
DVYYREGKEEAEETNVLPKEKQTKPAEAPRLQLSSGFAWNVGLDSLTPALPPLAESSDSE
EDEKPHQATIKKSKKERELEKQKAEKELSRIEEALMDPGRQPESADDFDRLVLSSPNSSI
LWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGSQESLTKV
FERAVQYNEPLKVFLHLADIYAKSEKFQEAGELYNRMLKRFRQEKAVWIKYGAFLLRRSQ
AAASHRVLQRALECLPSKEHVDVIAKFAQLEFQLGDAERAKAIFENTLSTYPKRTDVWSV
YIDMTIKHGSQKDVRDIFERVIHLSLAPKRMKFFFKRYLDYEKQHGTEKDVQAVKAKALE
YVEAKSSVLED |
NT seq |
5616 nt +upstreamnt +downstreamnt
atggcaaacctggaagaaagcttcccccgaggaggtacaagaaagatccacaaaccagag
aaagctttccagcagtcagttgaacaagacaacttatttgatatttctactgaagaggga
tccaccaaaagaaaaaagagccagaaggggccagcaaaaacaaaaaagttgaaaatcgaa
aagagagaaagcagcaagtccgcaagagagaagtttgaaatccttagtgttgagtccctg
tgtgagggaatgcgtattttgggttgcgtgaaagaggtgaatgaactggaactggtgatt
agtctccccaatggcctccagggctttgtgcaagtcactgaaatctgtgatgcctacacc
aaaaagctgaatgagcaggtgacacaagaacaacctctgaaggacctacttcacttgcct
gaacttttctcacctggaatgctggtaagatgtgtggtgagcagtctgggcatcacagac
aggggcaagaagagtgtcaagctgtctctgaaccccaaaaatgtcaacagagtgctgagt
gctgaggccctgaagcctggcatgctacttacaggtaccgtatccagcctggaagaccat
ggctacctagtggacattggtgttgatgggaccagagcttttctgccactgctgaaagcc
caggagtacatcagacagaagaacaaaggtgctaaactaaaggtgggtcagtacctgaac
tgcattgttgaaaaggtgaaaggcaacggaggagttgttagtctgtctgttggtcactca
gaggtttctacggccattgctactgaacagcagagctggaaccttaataacttgctacca
ggactggtggtcaaagctcaggtacagaaggtgactccatttggccttacgctaaacttc
ctcacattcttcacgggcgtggttgactttatgcacctggatcccaagaaagctggaaca
tatttctcaaatcaggcagtgagggcctgcatcctttgcgtccatcctcgaaccagagtt
gtgcacctgagcctgcgccccatcttcctacagcctggacgcccactcacccgactctct
tgccagaaccttggagcagtgctggatgatgttcctgtccagggttttttcaaaaaggct
ggggccacctttaggctgaaggatggggttctggcctatgcccggctcagccatctctct
gattctaagaacgtcttcaatcctgaggccttcaagccagggaacactcacaagtgtaga
attattgactacagccaaatggatgaactggccttgctctctctacgaacgtctattatt
gaagctcagtaccttagatatcatgacatcgaacctggggcagtggtaaagggcacagtg
ctaaccataaagtcatatgggatgctggtgaaggtgggcgagcagatgaggggcctggta
cctcccatgcacctggctgacatcctgatgaagaatccggagaagaagtaccacatcggg
gatgaggtcaagtgccgggttttgctttgtgaccctgaagccaagaagctgatgatgacc
ctgaaaaaaaccctgattgagtccaaactacctgtcattacctgctatgccgatgccaag
cctggtctgcagacacatggcttcatcatcagggtcaaggactatggctgcattgtgaag
ttctacaacaatgtgcagggactggtgcccaagcatgagctcagtactgagtatatccct
gacccggagagagttttttacactggccaggtggtgaaggttgtcgtattgaactgtgag
ccatccaaagagaggatgctcttatccttcaagctgtcgagtgatccagagccaaagaaa
gagcctgcaggacacagtcagaagaaaggaaaagccattaacattgggcagttggtagat
gtgaaggttttagagaagaccaaagatgggctggaggtggctgtcctgccccacaacatc
cgtgctttcctccccacatctcatctgtcggaccacgttgccaacggcccattgttacat
cattggctccaggcaggtgacatccttcaccgagtcctgtgtctgagccagagcgagggg
cgtgttcttctttgcaggaagccagccttggtctccacagtagaaggtggccaggatccc
aagaacttctcagaaatccatcctggaatgctgctcattggttttgtgaagagcatcaag
gactatggcgtgttcatccagttcccctcaggtcttagcggactggccccaaaagctatc
atgagtgacaaatttgtgacctccacaagtgaccactttgttgagggccagacagtagcg
gcaaaggtgaccaatgtggatgaggagaagcagcggatgctgctgtcactgcggctgtcg
gactgtggtctgggggacttggctatcaccagcctcctcctcctgaatcagtgcctggag
gagctgcagggcgtgcgcagccttatgagcaaccgagactctgtgttgatccagacgctg
gccgagatgaccccaggaatgttccttgacctagtggtgcaggaggtgttggaagatggc
tctgtggtattcagtgggggtccagtgcccgacctggtcctgaaagccagcagataccat
cgcgcagggcaggaggtggaatctgggcagaaaaagaaggttgttatcttaaatgttgat
cttttgaagttggaagtgcacgtttcccttcaccaggacttggtgaatagaaaagctaga
aagctgaggaaaggcagcgaacaccaggcgattgtgcagcacttggagaagtcctttgcc
attgcctccttggtagagacgggccacctggcagctttctccctgacctctcacctcaac
gacaccttccgctttgactcagagaaattgcaggtgggacagggtgtctccctaaccctc
aagaccacagaaccaggagtgactggccttcttttggctgtggaggggccggctgccaag
aggaccatgaggccgacccagaaggactctgagacagttgatgaggatgaagaagtggat
ccagctctgactgtagggaccataaagaagcacaccctctccatcggggacatggtcaca
gggactgtcaagtccattaagcctacccatgtggttgtgactctggaagatggcattatt
ggctgtatccatgcctcccacattctagatgatgttccagagggcacctctcctactacc
aagctgaaggttgggaagacggtcactgcccgagtgattggcgggcgagacatgaagaca
ttcaagtatctcccaataagtcaccccagattcgttcgaaccatcccggagctgagtgtt
cggccaagtgagctggaggatggccacactgctcttaacactcactctgttagccccatg
gagaagattaaacagtaccaggccggccagactgttacttgcttcttaaagaaatacaat
gtggtgaagaaatggcttgaggtggagattgccccagacatccgggggagaattccctta
ttgctcacttctctgagcttcaaggttctgaagcatccagataagaagttccgggttggc
caggccctgagggccaccgttgttggcccagattcctccaagaccctcttatgtctgtcc
ctcacaggtcctcacaagcttgaggaaggggaagtggccatgggccgagtggtgaaggtg
actcccaacgaggggctgaccgtctccttcccctttgggaagataggaacagtcagtata
tttcacatgagtgactcctactccgagacgcccctggaagacttcgtcccccagaaggtt
gtcagatgttacatcctgtccactgcagacaacgtattgactttgtcgctgcgatcatcc
agaacaaacccggagacgaaaagcaaagtagaagatccagagattaactccatccaggac
attaaggaagggcagcttctgaggggctatgtagggtccatccagccacacggtgtgttc
tttcgccttggcccctccgttgtgggtttggctcggtactcccatgtctcccagcacagc
ccgtccaagaaagccctttataacaaacacctccctgaagggaagctgctcacagccagg
gtcctacgccttaaccaccagaagaacctggtagagctgtctttcctccccggagacact
gggaagccagacgtgctttctgcttccttggaagggcaacttacaaagcaagaggagagg
aaaacagaggctgaggagagagaccaaaaaggggaaaagaaaaatcagaaaaggaacgag
aagaagaaccagaaggggcaggaggaggtggagatgcccagcaaggagaagcaacagccc
cagaagccacaggcgcagaagcggggcgggcgggagtgccgggagtctgggagtgagcag
gaaagagtgagcaagaagccaaagaaagccggcctgtcagaggaggacgacagccttgtg
gacgtgtactatcgggagggaaaagaggaggcagaagagacgaatgtgctgcccaaggag
aagcaaaccaagccagcagaagcgccccggctgcagctgtcttcaggcttcgcttggaat
gtgggactagactctctgaccccggccttgccacctctagcagagagctcagacagcgag
gaggatgagaagccacaccaagccacgataaagaaaagcaagaaagaaagggagttggag
aagcagaaggcagagaaggaactgtcccgcattgaggaggcgctgatggatcctgggcgg
cagccagagtccgcggatgattttgaccgactggtgctgagctcccccaacagctccatt
ctgtggctgcagtacatggctttccacctgcaggccacggagatcgagaaggcccgtgcc
gtggctgagagggcccttaagaccatctccttcagagaggagcaggagaagctgaacgtg
tgggtggctctgctgaacctggagaacatgtacggctctcaggagtccctgaccaaggtc
tttgagcgagccgtgcagtacaacgagcctctcaaagtctttctccacctggctgacatc
tacgccaagtcagagaaattccaggaagctggtgaactctacaaccggatgctgaagcgt
ttccggcaggagaaagctgtgtggatcaaatacggcgccttccttctgcggaggagccag
gctgcagccagtcaccgcgtgctgcagcgagccctggagtgcctgcctagcaaggagcat
gtggatgtcattgccaagtttgcccagcttgagtttcagctgggggatgcagagcgggcc
aaagccatttttgagaacacgctgagcacctacccaaagcgcacagatgtctggtcggtc
tatatcgacatgaccatcaagcacggcagccagaaggacgtccgggacatctttgagcgg
gtcattcatctgagcttggcccccaagagaatgaagttcttcttcaagcgctacctggac
tacgagaagcagcatggcactgagaaggatgtgcaggcagtcaaggccaaggccctggag
tatgtggaggccaagagctcagtgctagaggactag |