Homo sapiens (human): 23024
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Entry
23024 CDS
T01001
Symbol
PDZRN3, LNX3, SEMACAP3, SEMCAP3
Name
(RefSeq) PDZ domain containing ring finger 3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
hsa
Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
23024 (PDZRN3)
Enzymes [BR:
hsa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
23024 (PDZRN3)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
23024 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
Sina_ZnF
zf-TRAF
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
23024
NCBI-ProteinID:
NP_055824
OMIM:
609729
HGNC:
17704
Ensembl:
ENSG00000121440
UniProt:
Q9UPQ7
Structure
PDB
PDBj
LinkDB
All DBs
Position
3:complement(73382431..73624941)
Genome browser
AA seq
1066 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAYATRGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDSGPAAKEGGLQI
HDRIIEVNGRDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSSPSPPVLDPYLLPEEHPSAHEYYDPNDYIGDIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHDEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSNPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDADYLGIPVDECERFRELLELKCQVKSAT
PYGLYYPSGPLDAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRESWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLR
RAAEGISCPSSEGAVGTTEAYGPASKNLLSITEDPEVGTPTYSPSLKELDPNQPLESKER
RASDGSRSPTPSQKLGSAYLPSYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQM
SLVSMCKDLSSPTPSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTD
DDAVSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQAADDRKEMNILEL
SHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaagagctcaaccacgtcctgccgctcaagcgccttatcctcaagctggacatc
aagtgcgcgtacgcgacgcgcggctgcggccgggtggtcaagctgcagcagctgccggag
cacctcgagcgctgcgacttcgcgcccgcgcgctgtcgccacgcgggttgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcctgcgacgcgcggccagtgggc
cgctgccaggagggctgcgggctacccttgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgagcgctgcgggcgcacaacggcgcgctccaggcccgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgctgggaagcgcgagaagtcgctggtggcc
cagctggccgcggcgcagcttgagctgcagatgaccgcgctgcgctaccagaagaaattc
accgaatacagcgcgcgcctcgactcgctcagccgctgcgtggccgcgccgcccggcggc
aagggcgaagaaaccaaaagtctgactcttgtcctgcatcgggactccggctccctggga
ttcaatattattggtggccggccgagtgtggataaccacgatggatcatccagtgaagga
atctttgtatccaagatagttgacagtgggcctgcagccaaggaaggaggcctgcaaatt
catgacaggattattgaggtcaacggcagagacttatccagagcaactcatgaccaggct
gtggaagctttcaagacagccaaggagcccatagtggtgcaggtgttgagaagaacacca
aggaccaaaatgttcacgcctccatcagagtctcagctggtggacacgggaacccaaacc
gacatcacctttgaacatatcatggccctcactaagatgtcctctcccagcccacccgtg
ctggatccctatctcttgccagaggagcatccctcagcccatgaatactacgatccaaat
gactacattggagacatccatcaggagatggacagggaggagctggagctggaggaagtg
gacctctacagaatgaacagccaggacaagctgggcctcactgtgtgctaccggacggac
gatgaagacgacattgggatttatatcagtgagattgaccctaacagcattgcagccaag
gatgggcgcatccgagaaggagaccgcattatccagattaatgggatagaggtgcagaac
cgtgaagaggctgtggctcttctaaccagtgaagaaaataaaaacttttcattgctgatt
gcaaggcctgaactccagctggatgagggctggatggatgatgacaggaacgactttctg
gatgacctgcacatggacatgctggaggagcagcaccaccaggccatgcaattcacagct
agcgtgctgcagcagaagaagcacgacgaagacggtgggaccacagatacagccaccatc
ttgtccaaccagcacgagaaggacagcggtgtggggcggaccgacgagagcacccgtaat
gacgagagctcggagcaagagaacaatggcgacgacgccaccgcatcctccaacccgctg
gcggggcagaggaagctcacctgcagccaggacaccttgggcagcggcgacctgcccttc
agcaacgagtctttcatttcggccgactgcacggacgccgactacctggggatcccggtg
gacgagtgcgagcgcttccgcgagctcctggagctcaagtgccaggtgaagagcgccacc
ccttacggcctgtactaccctagcggccccctggacgccggcaagagtgaccctgagagc
gtggacaaggagctggagctgctgaacgaagagctgcgcagcatcgagctggagtgcctg
agcatcgtgcgcgcccacaagatgcagcagctcaaggagcagtaccgcgagtcctggatg
ctgcacaacagcggcttccgcaactacaacaccagcatcgacgtgcgcagacacgagctc
tcagatatcaccgagctcccggagaaatccgacaaggacagctcgagcgcctacaacaca
ggcgagagctgccgcagcaccccgctcaccctggagatctcccccgacaactccttgagg
agagcggcggagggcatcagctgcccgagcagcgaaggggctgtggggaccacggaagcc
tacgggccagcctccaagaatctgctctccatcacggaagatcccgaagtgggcacccct
acctatagcccgtccctgaaggagctggaccccaaccagcccctggaaagcaaagagcgg
agagccagcgacgggagccggagccccacgcccagccagaagctgggcagcgcctacctg
ccctcctatcaccactccccatacaagcacgcgcacatcccggcgcacgcccagcactac
cagagctacatgcagctgatccagcagaagtcggccgtggagtacgcgcaaagccagatg
agcctggtgagcatgtgcaaggacctgagctctcccaccccgtcggagccgcgcatggag
tggaaggtgaagatccgcagcgacgggacgcgctacatcaccaagaggcccgtgcgggac
cgcctgctgcgggagcgcgccctgaagatccgggaagagcgcagcggcatgaccaccgac
gacgacgcggtgagcgagatgaagatggggcgctactggagcaaggaggagaggaagcag
cacctggtgaaggccaaggagcagcggcggcggcgcgagttcatgatgcagagcaggttg
gattgtctcaaggagcagcaagcagccgatgacaggaaggagatgaacattctcgaactg
agccacaaaaagatgatgaagaagaggaataagaaaatcttcgataactggatgacgatc
caagaactcttaacccacggcacaaaatccccggacggcactagagtatacaattccttc
ctatcggtgactactgtataa
DBGET
integrated database retrieval system
