KEGG   Homo sapiens (human): 25804
Entry
25804             CDS       T01001                                 
Symbol
LSM4, GRP, YER112W
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform 1
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
hsa  Homo sapiens (human)
Pathway
hsa03018  RNA degradation
hsa03040  Spliceosome
Network
nt06547  Spliceosome
  Element
N01969  U4/U6-U5 snRNP fomation
N01970  Spliceosome assembly (B complex formation)
N01971  spliceosome activation
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    25804 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    25804 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    25804 (LSM4)
   03041 Spliceosome [BR:hsa03041]
    25804 (LSM4)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     25804 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     25804 (LSM4)
Spliceosome [BR:hsa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    25804 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 25804
NCBI-ProteinID: NP_036453
OMIM: 607284
HGNC: 17259
Ensembl: ENSP00000469468.2
UniProt: Q9Y4Z0
Structure
LinkDB
Position
19:complement(18306236..18323076)
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVAKGRGRGGLQQQKQQKGRGMGGAGRGVFGGRGRGGI
PGTGRGQPEKKPGRQAGKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttcccttgtcactgctgaagacggctcagaatcaccccatgttggtggagctgaaa
aatggggagacgtacaatggacacctggtgagctgcgacaactggatgaacattaacctg
cgagaagtcatctgcacgtccagggacggggacaagttctggcggatgcccgagtgctac
atccgcggcagcaccatcaagtacctgcgcatccccgacgagatcatcgacatggtcaag
gaggaggtggtggccaagggccgcggccgcggaggcctgcagcagcagaagcagcagaaa
ggccgcggcatgggcggcgctggccgaggtgtgtttggtggccggggccgaggtgggatc
ccgggcacaggcagaggccagccagagaagaagcctggcagacaggcgggcaaacagtga

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