Homo sapiens (human): 26039
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Entry
26039 CDS
T01001
Symbol
SS18L1, CREST, LP2261, SMARCL2
Name
(RefSeq) SS18L1 subunit of BAF chromatin remodeling complex
KO
K15623
protein SSXT
Organism
hsa
Homo sapiens (human)
Pathway
hsa03082
ATP-dependent chromatin remodeling
hsa05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
26039 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
26039 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsa03036
]
26039 (SS18L1)
Chromosome and associated proteins [BR:
hsa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
26039 (SS18L1)
GBAF(ncBAF) complex
26039 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
26039
NCBI-ProteinID:
NP_945173
OMIM:
606472
HGNC:
15592
Ensembl:
ENSG00000184402
UniProt:
O75177
LinkDB
All DBs
Position
20:62143769..62182514
Genome browser
AA seq
396 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILEYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALTQSGSSQGLHSQGSLSDAISTGLPPSSLLQ
GQIGNGPSHVSMQQTAPNTLPTTSMSISGPGYSHAGPASQGVPMQGQGTIGNYVSRTNIN
MQSNPVSMMQQQAATSHYSSAQGGSQHYQGQSSIAMMGQGSQGSSMMGQRPMAPYRPSQQ
GSSQQYLGQEEYYGEQYSHSQGAAEPMGQQYYPDGHGDYAYQQSSYTEQSYDRSFEESTQ
HYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPSQQSYPGQQQGYGSAQGAPSQYPGYQQ
GQGQQYGSYRAPQTAPSAQQQRPYGYEQGQYGNYQQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtggccttcgcgtctgcccggccaagaggcaaaggggaggttacgcagcaaacc
atccagaagatgctggacgagaaccaccacctgatccagtgcatcctggagtaccagagc
aagggcaagacggccgagtgcacgcagtaccagcagatcctgcaccggaacctggtatac
ctggccacgatcgcagactccaaccagaacatgcagtccctgcttcctgccccgcccacg
cagaacatgaacctgggccctggagccctgactcagagcggctccagccagggcctgcac
tctcagggcagcctgagtgacgccatcagcacgggcctgccaccctcctccctcctgcag
ggccagattggcaacgggccgagccacgtgtccatgcagcagacggcgcctaacacgctg
cccaccacctccatgagcatctctgggcccggctacagccacgcgggacccgcctcgcag
ggcgtccccatgcaggggcaaggcaccatcggcaactacgtgtctcggaccaacatcaac
atgcagtccaacccagtctccatgatgcagcagcaggcggccacgtcgcactacagctcg
gcgcagggcggcagccagcactaccagggccagtcgtccatcgccatgatggggcagggc
agccaggggagcagcatgatggggcagcggcccatggcgccctaccggccctcccagcaa
ggctcttcccagcagtacctgggccaggaggagtactatggcgagcagtacagccacagc
cagggcgccgcggagcccatgggccagcagtactaccccgacggccatggcgattacgcc
taccagcagtcatcctacacggagcagagctacgaccggtccttcgaggagtccacgcag
cactactatgaggggggaaactcccagtacagccagcagcaggccgggtaccagcagggt
gccgcgcagcagcagacgtactcccagcagcagtaccccagccagcagagctaccccggg
cagcagcagggctacgggtctgcccagggagccccgtcacagtaccccggctaccagcaa
ggccaaggccagcagtacggaagctaccgagcaccgcagacagcgccgtctgcccagcag
cagcggccctacggctatgaacagggccagtatggaaattaccagcagtaa
DBGET
integrated database retrieval system
