Homo sapiens (human): 26046
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Entry
26046 CDS
T01001
Symbol
LTN1, C21orf10, C21orf98, RNF160, ZNF294
Name
(RefSeq) E3 ubiquitin-protein ligase listerin isoform 1
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
hsa
Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsa03009
]
26046 (LTN1)
04121 Ubiquitin system [BR:
hsa04121
]
26046 (LTN1)
Enzymes [BR:
hsa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
26046 (LTN1)
Ribosome biogenesis [BR:
hsa03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
26046 (LTN1)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
26046 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ltn1_1st
LTN1_E3_ligase_6th
UBC_like
LTN1_E3_ligase_5th
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
RINGv
zf-RING-like
HipN
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
26046
NCBI-ProteinID:
NP_056380
OMIM:
613083
HGNC:
13082
Ensembl:
ENSP00000354977.4
UniProt:
O94822
Structure
PDB
PDBj
LinkDB
All DBs
Position
21:complement(28928144..28992877)
Genome browser
AA seq
1766 aa
AA seq
DB search
MGGKNKQRTKGNLRPSNSGRAAELLAKEQGTVPGFIGFGTSQSDLGYVPAIQGAEEIDSL
VDSDFRMVLRKLSKKDVTTKLKAMQEFGTMCTERDTETVKGVLPYWPRIFCKISLDHDRR
VREATQQAFEKLILKVKKQLAPYLKSLMGYWLMAQCDTYTPAAFAAKDAFEAAFPPSKQP
EAIAFCKDEITSVLQDHLIKETPDTLSDPQTVPEEEREAKFYRVVTCSLLALKRLLCLLP
DNELDSLEEKFKSLLSQNKFWKYGKHSVPQIRSAYFELVSALCQRIPQLMKEEASKVSPS
VLLSIDDSDPIVCPALWEAVLYTLTTIEDCWLHVNAKKSVFPKLSTVIREGGRGLATVIY
PYLLPFISKLPQSITNPKLDFFKNFLTSLVAGLSTERTKTSSLESSAVISAFFECLRFIM
QQNLGEEEIEQMLVNDQLIPFIDAVLKDPGLQHGQLFNHLAETLSSWEAKADTEKDEKTA
HNLENVLIHFWERLSEICVAKISEPEADVESVLGVSNLLQVLQKPKSSLKSSKKKNGKVR
FADEILESNKENEKCVSSEGEKIEGWELTTEPSLTHNSSGLLSPLRKKPLEDLVCKLADI
SINYVNERKSEQHLRFLSTLLDSFSSSRVFKMLLGDEKQSIVQAKPLEIAKLVQKNPAVQ
FLYQKLIGWLNEDQRKDFGFLVDILYSALRCCDNDMERKKVLDDLTKVDLKWNSLLKIIE
KACPSSDKHALVTPWLKGDILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLSQ
HVKNDYLIGDVYVERIIVRLHETLFKTKKLSEAESSDSSVSFICDVAYNYFSSAKGCLLM
PSSEDLLLTLFQLCAQSKEKTHLPDFLICKLKNTWLSGVNLLVHQTDSSYKESTFLHLSA
LWLKNQVQASSLDINSLQVLLSAVDDLLNTLLESEDSYLMGVYIGSVMPNDSEWEKMRQS
LPMQWLHRPLLEGRLSLNYECFKTDFKEQDIKTLPSHLCTSALLSKMVLIALRKETVLEN
NELEKIIAELLYSLQWCEELDNPPIFLIGFCEILQKMNITYDNLRVLGNTSGLLQLLFNR
SREHGTLWSLIIAKLILSRSISSDEVKPHYKRKESFFPLTEGNLHTIQSLCPFLSKEEKK
EFSAQCIPALLGWTKKDLCSTNGGFGHLAIFNSCLQTKSIDDGELLHGILKIIISWKKEH
EDIFLFSCNLSEASPEVLGVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTSE
NQALYSIPLVQLFACVSCDLACDLSAFFDSTTLDTIGNLPVNLISEWKEFFSQGIHSLLL
PILVTVTGENKDVSETSFQNAMLKPMCETLTYISKEQLLSHKLPARLVADQKTNLPEYLQ
TLLNTLAPLLLFRARPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMS
LLSIQEDLLENVLGCIPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYS
MYLRKTKSLNKLLYHLFRLMPENPTYAETAVEVPNKDPKTFFTEELQLSIRETTMLPYHI
PHLACSVYHMTLKDLPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSFQEISSVQTSTQL
FNGMTVKARATTREVMATYTIEDIVIELIIQLPSNYPLGSIIVESGKRVGVAVQQWRNWM
LQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKK
FHSACLYKWFTSSNKSTCPLCRETFF
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggaagaacaagcagcgaactaaagggaacctgaggccttcaaacagtggccga
gctgcagaactccttgccaaagaacagggaacagtgcctggatttattggttttggaaca
tctcagagtgacctaggctatgttcctgctattcaaggagctgaagaaattgacagtctt
gtagattctgatttccgaatggtgctgcggaaactttcaaagaaagatgtcaccacaaaa
ttaaaagctatgcaggaatttggaaccatgtgtacagagagagacacagaaactgtgaaa
ggagttcttccatattggccaagaattttttgcaaaatttcacttgatcatgaccgtcgc
gtccgagaagccacacaacaagcttttgaaaaacttatccttaaagtaaagaaacagttg
gctccctacttaaaaagtttaatgggatattggctaatggctcagtgtgatacttacaca
ccagctgcgtttgcagcaaaagatgcatttgaagcggcttttcctccaagcaagcaacct
gaagccatagcattttgtaaggatgaaattacaagtgtgctgcaggatcatcttataaaa
gaaacacctgatacactcagtgacccgcaaactgttccagaggaagaaagagaagctaaa
ttctaccgggttgtaacttgttccttattggcattaaagagattactttgccttttacct
gataatgagcttgattctctggaggagaaatttaagtctcttttatcacagaataagttt
tggaagtatggaaaacacagtgtacctcagattcgctcagcttattttgagttagtctct
gcattgtgccagcgcattccacagttgatgaaagaggaagcatccaaagtgagcccatca
gttctacttagcattgatgacagtgacccaattgtctgcccagctctctgggaagctgta
ctctatacacttacaactattgaggactgttggcttcatgtaaatgcaaaaaagagtgtg
tttcccaagctatcaactgtgattcgtgaaggtggtcggggtctagctactgtcatatat
ccttaccttctgccattcatcagcaagctccctcagtccatcacaaatccaaagttggat
ttcttcaaaaatttcctcacgtctctagttgctgggctgtcaacagagagaactaaaacc
agctctttagagtcctcggcagtaatatctgctttttttgaatgcttacgttttataatg
cagcaaaacttaggtgaggaagagattgaacagatgctcgtcaatgatcagttgatccct
tttattgatgcagttctcaaagacccaggattgcaacatgggcagctatttaaccattta
gcagaaactctaagttcctgggaagccaaagcagacacggaaaaagatgaaaaaacagct
cacaacttggagaacgtactgatacatttctgggaaagactgtcagagatctgtgttgcg
aaaatcagtgagccagaagctgatgttgagtccgttttgggtgtatctaacctattacag
gtgcttcagaagccgaagagctcattgaagtcaagtaaaaaaaaaaatggtaaggttaga
tttgctgatgagatacttgaaagcaataaagagaatgaaaaatgtgtatcttcagaagga
gagaagattgaaggctgggaattaacaactgaaccttctctcactcataattcttcaggc
cttttgtctcctctaaggaaaaaacctttggaagacttagtctgtaaactcgcagatata
agtattaattatgtcaatgaacgaaagtcagagcaacatctaaggtttctttctactctg
cttgactccttttcttcaagccgagtatttaaaatgctacttggtgatgaaaaacagagt
attgtccaagccaaacctcttgaaatagccaagcttgtacaaaaaaatcctgcggtgcag
tttttataccagaaactgataggttggctaaatgaagatcaaaggaaggattttggtttc
ctggtggacattttgtacagtgctctccggtgctgtgacaatgatatggaaagaaaaaaa
gtcttggatgatctaaccaaggtggacttgaaatggaattctcttcttaagattattgaa
aaggcatgtcctagttcagataaacatgctttagtaactccttggctcaaaggcgatatc
cttggtgagaaattggtcaacttggcagattgtctttgtaatgaggacttggaatccagg
gtatcttcagaatctcacttctcagaaagatggactcttctaagcttggtattatcccaa
catgttaaaaatgattacttgattggagacgtatatgttgaaagaatcattgttagactt
catgaaactttattcaaaacaaagaaattatcagaagctgaaagcagtgactcatcagtg
tcttttatctgtgatgtggcctataactatttcagctcagcgaaaggatgcttgctaatg
ccatcatctgaagatttattattaactctctttcagttatgtgctcagagcaaagaaaaa
acacatttgccagattttcttatctgtaaactgaaaaatacttggctctctggtgtaaat
ttattggttcatcaaactgacagttcatataaagagagtaccttcctacatttgtctgct
ctgtggctgaagaaccaagttcaggcttcatctttggatatcaacagtctccaagtcctc
ttgtctgctgttgatgatttgctaaatacacttctagagagtgaagattcttatcttatg
ggagtttatattggaagtgtaatgccgaacgacagtgaatgggaaaagatgaggcagtct
cttcctatgcagtggttacatagacctcttttagagggaagattgagtttgaattatgaa
tgtttcaaaacagattttaaggaacaggacataaagacacttcccagccatttgtgtact
tcagcattattgagcaaaatggtcttaattgcactgagaaaggaaacagtcttagaaaat
aatgagcttgagaaaataattgcagaactgctttattcactgcagtggtgtgaagaatta
gataacccacctatttttctaattggattttgtgaaatacttcaaaaaatgaatattacg
tatgataacttacgtgtacttggtaatacgtcgggccttttgcagctgttatttaacagg
tccagagaacatggcacactgtggtctcttattattgctaagttgatcctttcccgaagc
atttcatctgatgaagtaaaaccacattataagagaaaagaaagtttttttccactaact
gaaggcaatttgcataccattcaaagtctatgtccatttttgtcaaaagaagaaaagaaa
gaatttagtgctcaatgtatacctgctcttttgggctggactaagaaagatctttgcagc
actaatggaggttttggacatcttgccattttcaattcttgtctgcaaaccaaaagtata
gatgatggagagctattacatggaatattaaaaatcataatatcctggaagaaagagcat
gaagatatttttcttttcagttgtaatctatcagaagcaagtccagaggtactgggtgta
aatatagaaataatccggtttctttccctatttctgaaatactgctcatcccctttggca
gagagtgagtgggacttcatcatgtgctccatgttggcttggttggagacaacaagtgag
aatcaggcattgtattctattccacttgtgcaactgtttgcctgtgtcagctgtgatttg
gcctgtgacctcagtgctttctttgattccacaactctggataccattggcaatcttcct
gtaaatctaatcagtgaatggaaagaatttttttcccaaggcatccacagtttgctttta
cctattttggtgactgttacaggagaaaacaaagatgtgtctgaaacatcctttcagaat
gcaatgctgaaacccatgtgtgaaacattaacgtatatctcaaaggaacagctattgagt
cacaaacttcctgcaagattagttgctgaccaaaaaacaaacttaccagaatatctccag
actttgttaaatacattggccccattactcctcttcagagctaggcctgtgcaaattgct
gtttatcatatgctatacaaattgatgcctgaattaccacagtatgatcaggataatcta
aagtcatacggagatgaagaagaagagccagccttgtcaccaccagcagcactgatgtct
cttcttagcattcaagaggacttactagaaaatgttttggggtgtattcctgttggacag
atagttactattaaaccactgagtgaagacttctgttatgttctgggataccttctcact
tggaaattaatactaactttcttcaaagctgcatcatcacagcttcgggctttgtattcc
atgtatcttcggaaaacaaagagtttgaataaattgctctatcacctgttcaggcttatg
ccagaaaatccaacctatgcagagacagcagttgaggtcccaaataaggaccctaaaaca
ttctttactgaggagctccagctgagtattagagaaacaacaatgcttccataccacatt
ccacacttggcttgttcagtctatcatatgacattaaaagacttgcctgccatggttagg
ttgtggtggaatagcagtgagaagcgtgttttcaatattgtggatagatttacaagcaag
tatgtcagcagtgttctttcttttcaagaaatatcttctgtacaaacaagtacacaacta
tttaatggcatgacggttaaagctcgagctactactcgagaggtaatggctacttatact
attgaggacatagttattgaacttataatacaactgccttcaaattatccactgggttca
ataatagtagaaagtgggaaaagagtaggagtagctgttcagcagtggcggaactggatg
ctgcagttaagcacttacctcacccatcagaatggaagtattatggaaggcttagcttta
tggaaaaataacgtagacaaacgttttgagggtgttgaagattgcatgatctgtttctca
gtcattcacggtttcaactattcccttcccaaaaaagcctgtagaacatgcaagaaaaaa
ttccattcagcctgcttgtacaaatggtttacatctagcaacaaatccacttgtccactg
tgtcgtgagacgtttttctga
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integrated database retrieval system
