Homo sapiens (human): 27257
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Entry
27257 CDS
T01001
Symbol
LSM1, CASM, YJL124C
Name
(RefSeq) LSM1 homolog, mRNA degradation associated
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
hsa
Homo sapiens (human)
Pathway
hsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
27257 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
27257 (LSM1)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
27257 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
27257 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
27257
NCBI-ProteinID:
NP_055277
OMIM:
607281
HGNC:
20472
Ensembl:
ENSG00000175324
UniProt:
O15116
A0A0S2Z590
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All DBs
Position
8:complement(38163321..38176730)
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQTKLEAEKLKVQALKDR
GLSIPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactatatgcctggcaccgccagcctcatcgaggacattgacaaaaagcacttggtt
ctgcttcgagatggaaggacacttataggctttttaagaagcattgatcaatttgcaaac
ttagtgctacatcagactgtggagcgtattcatgtgggcaaaaaatacggtgatattcct
cgagggatttttgtggtcagaggagaaaatgtggtcctactaggagaaatagacttggaa
aaggagagtgacacacccctccagcaagtatccattgaagaaattctagaagaacaaagg
gtggaacagcagaccaagctggaagcagagaagttgaaagtgcaggccctgaaggaccga
ggtctttccattcctcgagcagatactcttgatgagtactaa
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integrated database retrieval system
