Homo sapiens (human): 27327
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Entry
27327 CDS
T01001
Symbol
TNRC6A, CAGH26, FAME6, GW1, GW182, TNRC6
Name
(RefSeq) trinucleotide repeat containing adaptor 6A
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
hsa
Homo sapiens (human)
Disease
H02213
Familial adult myoclonic epilepsy
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
27327 (TNRC6A)
03036 Chromosome and associated proteins [BR:
hsa03036
]
27327 (TNRC6A)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
27327 (TNRC6A)
Chromosome and associated proteins [BR:
hsa03036
]
Eukaryotic type
Gene silencing
piRNA pathway
27327 (TNRC6A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
27327
NCBI-ProteinID:
NP_055309
OMIM:
610739
HGNC:
11969
Ensembl:
ENSG00000090905
UniProt:
Q8NDV7
Structure
PDB
PDBj
LinkDB
All DBs
Position
16:24610205..24826218
Genome browser
AA seq
1962 aa
AA seq
DB search
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANNQQPQQQQQQQQPQQQQPQQQPQPQPQQQ
QPQQQPQALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLNSQSESSALTN
QQPQNNGEVQNSKNQSDINHSTSGSHYENSQRGPVSSTSDSSTNCKNAVVSDLSEKEAWP
SAPGSDPELASECMDADSASSSESERNITIMASGNTGGEKDGLRNSTGLGSQNKFVVGSS
SNNVGHGSSTGPWGFSHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPST
LNSASNHGAWPVLENNGLALKGPVGSGSSGINIQCSTIGQMPNNQSINSKVSGGSTHGTW
GSLQETCESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNSGSVQNNELPSSNT
GAWRVSTMNHPQMQAPSGMNGTSLSHLSNGESKSGGSYGTTWGAYGSNYSGDKCSGPNGQ
ANGDTVNATLMQPGVNGPMGTNFQVNTNKGGGVWESGAANSQSTSWGSGNGANSGGSRRG
WGTPAQNTGTNLPSVEWNKLPSNQHSNDSANGNGKTFTNGWKSTEEEDQGSATSQTNEQS
SVWAKTGGTVESDGSTESTGRLEEKGTGESQSRDRRKIDQHTLLQSIVNRTDLDPRVLSN
SGWGQTPIKQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSGACIDKTSPNGNDTSSV
SGWGDPKPALRWGDSKGSNCQGGWEDDSAATGMVKSNQWGNCKEEKAAWNDSQKNKQGWG
DGQKSSQGWSVSASDNWGETSRNNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWGN
NINPNNSSGWDESSKPTPSQGWGDPPKSNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPP
ATGKPPGTGWLGGPIPAPAKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVN
MWNKNVPNGNSRSDQQAQVHQLLTPASAISNKEASSGSGWGEPWGEPSTPATTVDNGTSA
WGKPIDSGPSWGEPIAAASSTSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPGNRPTG
WEEEEDVEIGMWNSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEEAW
INPFVKQFSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPG
SRPQISKESSMERNPYFDKDGIVADESQNMQFMSSQSMKLPPSNSALPNQALGSIAGLGM
QNLNSVRQNGNPSMFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVPVSLL
KYAPNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNRPQQ
DQQGRPLSVQQQMMQQSRQLDPNLLVKQQTPPSQQQPLHQPAMKSFLDNVMPHTTPELQK
GPSPINAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKHGAI
SSGFRLEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEPWKG
YPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIRASN
YNVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGLTGQ
KPPLSTWDNSPLRIGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTLRTL
CMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEISRFF
AQSQSLTPSPGWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLHGTSLWG
TPHYSTSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgtagaaagaaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaagcgagctacagccaacaatcagcagccacagcagcagcagcaa
cagcagcagccgcagcagcagcagccacagcagcagccacagccgcagccgcagcagcag
cagccacagcagcagccacaggccttgcctcggtatcctcgtgaagtacctccacgattt
cgccaccaggaacacaaacagcttctaaagaggggtcagcattttcctgttatagcagca
aaccttggatctgctgttaaggtgttaaacagccagtcagaaagcagtgctttaacaaat
caacagccacaaaataacggagaggtgcagaacagcaaaaaccagtcagatataaaccac
agtacttcaggatcccattatgaaaattcccagcggggacctgtgtcttctacaagtgat
tctagcacaaactgtaagaatgctgttgtaagtgacttgtcggaaaaagaagcatggccc
tcagcccctggcagtgatccggagttggcttcagaatgtatggatgctgattctgcctcc
agttctgaatcagagagaaacatcactatcatggcttcagggaacacaggtggtgaaaaa
gatggccttcggaatagcactggacttggttcccaaaacaagtttgtagttggtagcagc
agcaataatgtgggccatggaagtagtactgggccatggggtttttcccatggagccata
ataagcacatgtcaggtctctgtggatgctcctgaaagcaaatctgaaagtagcaacaat
agaatgaatgcttggggcactgtaagttcttcatcaaatggagggttaaatccaagcact
ttgaattcagctagcaaccatggtgcctggccagtattagagaacaatggacttgcccta
aaagggcctgtagggagtggtagttctggcattaatattcagtgcagtactataggccag
atgcctaacaatcagagtattaactctaaagtgagtggtggttctacccatggtacctgg
ggaagccttcaggaaacttgtgaatctgaagtaagtggtacacagaaggtttcattcagt
ggtcaacctcaaaatattaccactgaaatgactggaccaaataacactactaactttatg
acctctagtttaccaaactccggttcagtgcagaataatgagctgcctagtagtaacaca
ggggcctggcgtgtgagcacaatgaatcatcctcagatgcaggctccatcaggtatgaat
ggcacttccctttctcaccttagcaatggagagtcaaaaagtggaggctcttatggtact
acatggggtgcctatggttctaattactctggagacaaatgttcaggccctaatggccaa
gctaatggtgacactgtgaatgcaactctaatgcagcctggcgtaaatggtcctatgggc
actaactttcaagttaacacaaacaaaggaggtggtgtgtgggaatctggtgcagcaaac
tcccagagtacatcatggggaagtggaaatggcgcaaattctggaggaagtcgaagagga
tggggaacccctgcacaaaacactggcactaatttacccagcgttgagtggaacaaactg
cctagcaatcagcattccaatgatagtgcaaatggcaatggtaagacgtttacaaatgga
tggaaatctactgaggaagaggatcagggttctgccacatctcagacaaatgagcaaagc
agtgtgtgggccaaaacaggaggtacagtggagagcgatggtagtacagaaagcactgga
cgccttgaggaaaaaggaactggggaaagtcagagtagagacagaagaaaaattgatcag
cacacattactccaaagcattgtaaacagaactgacttagatccacgtgtcctgtccaac
tctggttggggacagactcctattaagcagaatactgcctgggatacagaaacatcacct
agaggggaacgaaagactgacaatgggacagaggcctggggaagctctgcaacacagact
tttaactcaggggcatgtatagataagactagccctaatggtaatgatacctcatctgta
tcagggtggggcgatcccaaacctgctctgaggtggggagattccaaaggctcaaactgc
cagggggggtgggaagatgattctgctgctacaggaatggtcaagagcaatcagtggggg
aattgcaaagaggagaaggctgcatggaatgactcgcaaaagaataaacagggatggggt
gatggacaaaaatcaagccaagggtggtctgtttctgccagtgataactggggagaaact
tcaaggaataaccattggggtgaggccaataagaaatccagctcaggaggtagtgacagt
gacaggtccgtttccggttggaacgaacttggtaaaactagttctttcacttggggaaac
aacataaatccaaataattcatcaggatgggatgaatcttctaaacctactccttcccag
ggatggggagaccctccaaagtctaatcagtctctaggttggggagattcgtcaaagcca
gtcagctctccagactggaacaagcaacaagacattgttggatcttggggaatcccacca
gctacaggcaaacctcctggtacaggctggctggggggacctataccagccccagcaaaa
gaagaagaacccacaggctgggaggaaccatccccagaatctatacgtcgcaaaatggag
attgatgatggaacttcagcttggggagatccaagcaaatacaactacaaaaatgtgaac
atgtggaacaaaaacgtcccaaatggcaacagccgttcagaccagcaagcacaggtacat
cagctgctaacgcctgcaagtgccatctcaaacaaagaggcaagcagtggctctggctgg
ggtgagccctggggggagccttctactccagccacaactgtggataatggtacttcagca
tggggtaagcccatagacagtggtcccagctggggggaacccattgctgcggcatccagc
acatccacgtggggctccagctctgttggtccacaagcattaagcaaatctgggccaaaa
tctatgcaagatggctggtgtggtgatgatatgccattgcctggaaatcgccccactggc
tgggaagaggaagaggatgtggagattggaatgtggaatagtaattcatctcaagagctt
aactcatctttaaattggccaccatatacaaagaaaatgtcatcgaagggtctgagtggc
aaaaaaaggagaagggaaaggggaatgatgaaaggtggaaacaaacaagaagaagcgtgg
ataaatccatttgttaaacagttttcaaacatcagtttttcgagagactcaccagaggaa
aatgtacaaagcaataagatggacctttctggaggaatgttacaagacaaacgaatggag
atagataaacatagcctaaatattggtgattacaatcgaacggtcgggaaaggccctggt
tctcggcctcagatttccaaagagtcttccatggagcgcaatccttattttgataaggat
ggcattgtagcagatgaatcccaaaacatgcagtttatgtccagtcaaagcatgaagctt
cccccttcaaatagtgcactacctaaccaggcccttggctccatagcagggctgggtatg
caaaacttgaattctgttagacagaatggcaatcccagtatgtttggtgttggaaacaca
gcagcacaaccccggggcatgcagcagcctccagcacaacctcttagttcatctcagcct
aatctccgtgctcaagtgcctcctccattactctcccctcaggttccagtttcattgctg
aagtatgcaccaaacaacggtggcctgaatccactctttggccctcaacaggtagccatg
ctgaaccagctatcccagctaaaccagctttctcagatctcccagttacagcgattgtta
gcgcagcagcaaagggcgcagagtcagagaagcgtgccttctgggaaccggccgcagcaa
gaccagcagggtcgacctcttagtgtgcagcagcaaatgatgcaacaatctcgtcaactt
gatccaaacctgttggtgaagcagcagactccaccatctcagcagcagccactccatcag
ccagccatgaagtctttccttgacaatgtcatgccccacactacacctgagctgcaaaaa
gggccatcaccaataaatgctttcagcaacttccctataggcttgaactcaaacttgaat
gtaaatatggatatgaacagtattaaagagccacagtcaagactaaggaagtggacgaca
gtggacagcatttctgtgaacacatctttggatcaaaactccagcaaacatggtgctatt
tcaagtggtttcaggctggaagagtctccatttgttccctatgactttatgaacagcagt
acttcaccagccagtcctccaggttcaataggagatggctggccacgtgccaaatcgcct
aacggctctagcagtgttaattggccaccagaatttcgtcctggtgagccatggaaaggt
tatccaaacattgaccctgaaactgacccttacgtcactcctggcagtgtcataaacaat
ctttcaattaatactgtgcgggaagttgaccacctcagggacaggaacagtgggtcatcc
tcatccttgaacaccacgctgccttcaactagtgcctggtcatccattcgtgcctccaac
tacaacgttcccctcagcagtacagcacaaagcacttcagccagaaatagtgattccaaa
ttgacatggtctcctggttcagttacaaacacctctctggctcatgagctgtggaaggtc
cctttgccacctaaaaacatcactgctccgtcccgcccacctccgggactgactggtcag
aagccacccttgtctacgtgggataattctccccttcgtataggtggaggatggggaaat
tctgacgccagatataccccaggttccagctggggtgagagcagctcagggagaataaca
aattggcttgttctaaaaaaccttacacctcagatcgatggctcaactctgcgcactctg
tgcatgcagcacggcccgctgatcacattccacctgaacctccctcacggaaatgctctg
gtccgctacagttcaaaagaagaggtagtgaaggcacaaaagtctctgcacatgtgtgta
ctggggaacactactattcttgctgagtttgccagtgaagaggagatcagtcgtttcttt
gcacaaagccagtctctgaccccttctcccggctggcagtctctcgggtccagccagagc
cggctgggctccctcgactgttcccactcattctccagccggaccgatctcaatcactgg
aatggtgctgggctgtcgggaactaactgtggagaccttcacggcacttcactctggggg
accccgcattattccacaagcctgtggggtcccccaagcagcagcgacccccgaggaatt
agcagcccatctcccattaacgcttttctttctgttgaccacctgggtgggggtggagag
tccatgtaa
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