Homo sapiens (human): 342372
Help
Entry
342372 CDS
T01001
Symbol
PKD1L3
Name
(RefSeq) polycystin 1 like 3, transient receptor potential channel interacting
KO
K04989
polycystin 1L3
Organism
hsa
Homo sapiens (human)
Pathway
hsa04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
342372 (PKD1L3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hsa04040
]
342372 (PKD1L3)
Ion channels [BR:
hsa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
342372 (PKD1L3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
PLAT
Ion_trans
GPS
Lectin_C
DUF6517
Motif
Other DBs
NCBI-GeneID:
342372
NCBI-ProteinID:
NP_853514
OMIM:
607895
HGNC:
21716
Ensembl:
ENSG00000277481
UniProt:
Q7Z443
LinkDB
All DBs
Position
16:complement(71929538..72000402)
Genome browser
AA seq
1732 aa
AA seq
DB search
MFFKGGSWLWLYIRTSIILGSELNSPAPHGQNNCYQLNRFQCSFEEAQHYCHVQRGFLAH
IWNKEVQDLIRDYLEEGKKWWIGQNVMPLKKHQDNKYPADVAANGPPKPLSCTYLSRNFI
RISSKGDKCLLKYYFICQTGDFLDGDAHYERNGNNSHLYQRHKKTKRGVAIARDKMPPGP
GHLPTTCHYPLPAHLSKTLCHPISQFPSVLSSITSQVTSAASEPSSQPLPVITQLTMPVS
VTHAGQSLAETTSSPKEEGHPNTFTSYLQVSLQKASGQVIDEIAGNFSRAVHGLQALNKL
QEACEFLQKLTALTPRFSKPAQVNLINSLIYLSEELLRIPFQNNNSLGFKVPPTVCPFHS
LNNVTKAGEGSWLESKRHTEPVEDILEMSLVEFGNIGEAFLEQNQSPESSVTLTSANATL
LLSRQNISTLPLSSYTLGHPAPVRLGFPSALALKELLNKHPGVNVQITGLAFNPFKDLDN
RNIVGSIGSVLLSANRKLLQVHDLMEDIEIMLWRNVSLETHPTSLNMSTHQLTITVNVTS
LEKSLIVSIDPDSPLLMTLYLGFQYQPNCTHFHLNITLPKDKVWQKDEEYTWVLNPEHLQ
HGIGTYYITAVLSERQEGAQQTPSLVSVITAVTQCYYWEIHNQTWSSAGCQVGPQSTILR
TQCLCNHLTFFASDFFVVPRTVNVEDTIKLFLRVTNNPVGVSLLASLLGFYVITVVWARK
KDQADMQKVKVTVLADNDPSAQFHYLIQVYTGYRRSAATTAKVVITLYGSEGRSEPHHLC
DPQKTVFERGGLDVFLLTTWTSLGNLHSLRLWHDNSGVSPSWYVSQVIVCDMAVKRKWHF
LCNCWLAVDLGDCELDRVFIPVSKRELFSFRHLFSSMIVEKFTQDYLWLSIATRHPWNQF
TRVQRLSCCMTLLLCNMVINVMFWKINSTTAKRDEQMRPFAVAWSELLVSIHTAVILFPI
NLVIGRLFPLIEPQETLPLFPPIQASCLSDASVEPLSATMVVEELKETVRFLLRRNTYLL
SKCEQPPWSSWDITKLVKLLSSLVSSHLEGQGCHQQGERHWARVVPENHHHFCCYLHRVL
QRLKSHLGTLGLTQGHQSCDFLDAASQLQKLQELLETHILPTEQEPSREVTSFAILSSEE
GKKPISNGLSKWLTSVCWLLLGFTSLASAFFTALYSLELSKDQATSWMISIILSVLQNIF
ISQPVKVVFFTFLYSLMMSRMPRLNKENEQQTKRILALLAKCSSSVPGSRDKNNPVYVAP
AINSPTKHPERTLKKKKLFKLTGDILVQILFLTLLMTAIYSAKNSNRFYLHQAIWKTFSH
QFSEIKLLQDFYPWANHILLPSLYGDYRGKNAVLEPSHCKCGVQLIFQIPRTKTYEKVDE
GQLAFCDNGHTCGRPKSLFPGLHLRRFSYICSPRPMVLIPTDELHERLTSKNENGFSYIM
RGAFFTSLRLESFTSLQMSKKGCVWSIISQVIYYLLVCYYAFIQGCQLKQQKWRFFTGKR
NILDTSIILISFILLGLDMKSISLHKKNMARYRDDQDRFISFYEAVKVNSAATHLVGFPV
LLATVQLWNLLRHSPRLRVISRTLSRAWDEVVGFLLIILILLTGYAIAFNLLFGCSISDY
RTFFSSAVTVVGLLMGISHQEEVFALDPVLGTFLILTSVILMVLVVINLFVSAILMAFGK
ERKSLKKEAALIDTLLQKLSNLLGISWPQKTSSEQAATTAVGSDTEVLDELP
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcaaaggaggaagctggctttggttatacatcagaacaagtattattctagga
agtgagctaaacagcccagcaccacatgggcaaaataattgttaccagcttaacagattt
caatgcagctttgaggaagcacagcattactgtcatgtgcagagaggattcctagctcat
atttggaacaaggaagttcaagatctcatccgggactatctggaagaaggaaagaagtgg
tggattgggcaaaatgtaatgccattgaaaaagcatcaagacaacaaatacccagcagac
gttgcagccaacgggcccccaaagcccctcagctgcacctacctgtccagaaacttcatt
cggatctcatccaaaggggacaagtgcttactgaaatactatttcatttgccagactggt
gactttttggacggagatgcccattatgaaagaaatggaaataattcccatttgtaccag
agacacaagaagacaaaaagaggagttgcaatagcaagagacaaaatgcccccaggacct
ggtcatcttccaaccacatgtcactatcctcttcctgctcatctttccaagaccctgtgt
catcccatcagccagtttccttcagtactatcaagtatcacatcacaggtaacatcagcc
gcatctgaacccagcagccagcctctccctgtgataacacagctcaccatgcccgtgtct
gtcacgcatgctgggcaatctctggcagaaacaacttcaagcccaaaggaagaaggtcat
ccgaataccttcacctcttatctacaagtgtcattgcagaaggcatctggtcaggtcata
gatgagatagcagggaacttcagcagagcagttcatggtttgcaagctcttaacaaacta
caggaagcttgtgagttcctccagaaactaacagccttaaccccaagattttctaagcca
gctcaggttaatctcatcaattcccttatttacctgagtgaggagttactcaggatccca
tttcagaacaacaacagtctgggcttcaaagttcctccaactgtctgcccctttcattcc
ctcaacaatgtcaccaaagctggagaaggaagttggctggaatccaagcgtcatactgag
ccggtagaagacatcctggaaatgtccttggtggagtttgggaatatcggggaagcattt
ctagagcagaaccagtctcccgagtcttcagtgactttgacctctgccaatgctactctg
ctgctgagcagacaaaacatatcaactttaccgctgagctcttacactctgggtcaccca
gcccctgtgaggctaggctttccgtcggctttagctttgaaggagctcttgaataaacat
ccaggagttaatgtccaaataacaggactagctttcaatcccttcaaggatttggacaac
agaaacattgttggaagcattggaagtgtgttactaagcgctaatcgtaaattgctccaa
gtccatgatttaatggaggacattgagatcatgctctggagaaatgttagcttggaaacc
catcccaccagcctcaacatgagcacacatcagcttacaatcacagtgaacgtcacttcc
ttggagaaatccttgatagtgagcatagatcctgacagtccccttttaatgacactctac
ctggggttccagtatcagcctaactgcactcacttccacctgaacatcacccttccaaag
gataaggtgtggcaaaaagatgaggagtacacgtgggtgctgaatccagagcatctgcag
cacgggattggcacctactatataacagctgtgctgagtgagaggcaggagggtgctcag
cagacacccagcttggtctcggtcatcaccgccgtcactcagtgttactactgggagatc
cacaaccagacatggagcagcgccggatgccaagttgggccacagagcacaattctgagg
acacagtgtctctgtaaccacctgaccttctttgccagcgacttctttgtcgtgcccagg
accgtgaatgttgaagacacgatcaaactgttccttcgcgtgaccaacaatcctgttggg
gtgtcactgctggccagccttttaggattttatgtgatcacagttgtgtgggctcggaaa
aaggatcaagcagatatgcagaaggtgaaggtcactgtcctggctgataatgaccccagc
gctcaatttcactaccttattcaggtctacaccggatatcgaagaagcgctgctacaaca
gctaaggttgtcatcaccctctatggatcagagggacggagtgagccccatcacctctgt
gacccccagaagacagtctttgaacgagggggcctggatgtcttccttctcaccacttgg
acctctctagggaacctgcacagccttcggctctggcatgacaattctggcgtcagtccc
tcctggtatgtcagccaggtaattgtctgtgacatggcagttaagaggaagtggcatttc
ctgtgcaattgctggctggctgtggacctcggagactgtgagcttgaccgggtcttcatc
ccagtttcaaagagagagctcttttcctttagacatctgttttcctccatgattgtggaa
aagttcacccaggattatctgtggctttcaattgcaactcggcatccctggaaccagttt
acaagggtccaacggctgtcttgctgcatgacactgctactctgcaacatggtcatcaat
gttatgttctggaagataaacagcaccactgccaagagagatgagcaaatgcgtccattt
gctgtggcctggtctgaactgctggtcagcatccatactgctgtcatcctcttcccaatc
aatcttgtcatagggcggctcttcccgttgattgagccacaggagactctgcccctcttt
cctcccatccaggcctcctgcctctcagatgcttctgttgagcctctctctgccacaatg
gtagttgaggaattaaaggaaactgtgagattcctgctcaggagaaatacatacctactc
tccaagtgtgagcagccgccatggagttcttgggacattactaagctggtgaaactttta
tccagcctcgtatcatctcacttggagggtcaaggctgtcatcagcagggagagcgccac
tgggcacgtgttgttcctgaaaaccaccatcatttctgctgttacctgcatagagttctg
cagaggctgaaatctcacttaggcacgctgggtctcacccagggtcaccagtcctgtgac
ttcctagatgcagccagccaacttcaaaaactccaggaactcttggaaacacatattctt
cccacggagcaagagccatccagggaagtcaccagttttgccatcctgagctcagaagaa
ggaaaaaagcccatctcaaatggcctgtccaaatggttgacttcagtctgctggctcctc
ttaggtttcactagcctggcttcagccttttttacagcactttatagcttggaattgagc
aaagaccaagccaccagctggatgatttcaattattttatcagtgcttcagaacatcttc
atcagccagccagtaaaggtggtcttcttcacattcttatactcactgatgatgagcagg
atgccacggcttaacaaagagaatgaacaacaaacaaagaggatcttggcactcttggca
aaatgttcttcgtcagtaccaggttcaagagataagaacaaccccgtctatgtagcccca
gctataaatagtccaactaagcacccagaaagaaccttgaaaaagaagaaactcttcaag
ctgactggagatattttggtacaaatcctcttccttaccctgttgatgactgcaatctac
tctgcaaagaactccaatagattttacctccaccaagctatctggaagacattttcgcac
cagttctcggaaatcaaacttcttcaggatttctacccctgggccaatcatatccttctt
cctagcctgtatggggattacagaggtaagaatgcagtcctggagcccagtcattgcaaa
tgtggggtacaattaattttccaaataccccgtaccaagacctatgagaaagtggacgaa
ggtcagctggcgttttgtgataacggccatacctgtgggcgtcccaagagcctattccct
ggacttcatctaaggaggttcagttacatctgttcacccaggcccatggtgctgattccc
actgatgagcttcacgaaaggctgacaagcaagaatgagaatggattcagttacatcatg
agaggtgctttcttcacctctttgagactggaaagcttcacttcccttcagatgtcaaag
aagggctgtgtctggtctatcatctcacaagtcatctattatctactggtctgttactat
gccttcatacagggttgtcagctgaaacagcagaagtggaggttcttcactgggaaaaga
aacattctggacacaagtataatcctcattagcttcatcctcctggggcttgacatgaag
agtatttctctacataagaaaaacatggcacgataccgcgatgaccaggacagattcatc
agcttctatgaggcagtaaaagtgaactctgctgcgactcaccttgtgggcttcccggtt
ctcctggcaactgttcagttatggaacctgctgcgtcatagccccaggctgcgggtcatc
agcaggacactgagccgagcctgggacgaggtggtgggctttctgctgatcatcctaatc
ctgctgacaggctatgccattgcctttaacctgctgtttggatgcagcatctctgactac
cggacatttttcagctcagcagtgactgttgttggtctcctgatgggaatttctcaccaa
gaggaggttttcgctttagacccagtcctgggcacctttctgatcctcaccagtgtcatc
ttgatggtacttgtggtaattaatcttttcgtttcggccattctcatggcctttggaaaa
gaaagaaagtcgcttaagaaagaagctgcactaatagatacactgctacagaagctctca
aatttgttaggaatcagttggccccaaaaaacctcatctgagcaagcagccacgacagca
gtgggcagtgacactgaagttttagatgaactaccttaa
DBGET
integrated database retrieval system
