Homo sapiens (human): 3842
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Entry
3842 CDS
T01001
Symbol
TNPO1, IPO2, KPNB2, MIP, MIP1, TRN
Name
(RefSeq) transportin 1
KO
K18752
transportin-1
Organism
hsa
Homo sapiens (human)
Pathway
hsa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
3842 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
3842 (TNPO1)
03009 Ribosome biogenesis [BR:
hsa03009
]
3842 (TNPO1)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
3842 (TNPO1)
Ribosome biogenesis [BR:
hsa03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
3842 (TNPO1)
Pre-60S particles
3842 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
Arm
Vac14_Fab1_bd
TOR1L1_N
IBN_N
Cnd1
HEAT_EF3_N
PDS5
Adaptin_N
MMS19_C
CEP104-like_TOG
HEAT_Maestro
INTS7_N
UNC45-central
TPR_TTI1_C
Dopey_N
RTP1_C1
DUF3689
Motif
Other DBs
NCBI-GeneID:
3842
NCBI-ProteinID:
NP_002261
OMIM:
602901
HGNC:
6401
Ensembl:
ENSG00000083312
UniProt:
Q92973
Structure
PDB
PDBj
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All DBs
Position
5:72816661..72914388
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AA seq
898 aa
AA seq
DB search
MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIF
VLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI
LITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPL
NIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVR
KNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDV
LVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDED
GIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWV
VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQ
PPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSK
YQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSS
VATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLA
EGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPI
LGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTA
ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDF
IFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAFYGV
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggaccggcaaaccaagatggagtatgagtggaaacctgacgagcaagggctt
cagcaaatcctgcagctgttgaaggagtcccagtccccagacaccaccatccagagaacc
gtgcaacaaaaactggaacaacttaatcagtatccagactttaacaactacttgattttt
gttcttacaaaattaaaatctgaagatgaacccacaagatcattgagtggtcttatcttg
aagaataatgtgaaagcacactttcagaacttcccaaatggtgtaacagactttattaaa
agtgaatgtttaaataatattggtgactcctctcctctgattagagccactgttggtatt
ttgatcacaactatagcctccaagggagaattgcagaattggcctgacctcttaccaaaa
ctctgtagcctgttggattctgaagattataatacctgtgagggagcatttggtgccctt
cagaagatttgtgaagattctgctgagattttagacagtgatgttttagatcgtcctctc
aacatcatgattcccaaatttttacagttcttcaagcatagtagtccaaaaataaggtct
cacgctgttgcatgtgtcaatcagtttatcatcagtaggactcaagctctaatgttgcac
attgattcttttattgagaatctctttgcattagctggtgatgaagaaccagaggtacgg
aaaaatgtgtgccgagcacttgtgatgttgctcgaagttcgaatggatcgcctgcttcct
cacatgcataatatagttgagtacatgctacagaggactcaagatcaagatgaaaatgtg
gctttagaagcctgtgaattttggctaactttagctgaacagccaatatgcaaagatgta
ctcgtaaggcatcttcctaagttgattcctgtgttagtgaatggcatgaagtactcagac
atagatattatcctacttaagggtgatgttgaagaagacgaaacgattcctgatagtgaa
caggatatacggccacgttttcaccgatcgaggacggtggctcagcagcatgatgaagat
ggaattgaagaggaagatgatgatgatgatgaaattgatgatgatgatacaatttctgac
tggaatctaagaaaatgttctgctgctgccctggatgttcttgcaaatgtgtatcgtgat
gaactgctgccacatattttgccccttttgaaagaattactttttcatcatgaatgggtt
gttaaagaatcaggcattttggttttaggagcaattgctgaaggttgcatgcagggcatg
attccatacttgcctgagcttattcctcaccttattcagtgcctctctgataaaaaggct
cttgtgcgttccataacatgctggactcttagccgctatgcacactgggtggtcagccag
ccgccagacacgtacctgaagccattaatgacagaattgctaaagcgcatcctggacagc
aacaagagagtacaagaagctgcctgcagtgcctttgctaccctagaagaggaggcttgt
acagaacttgttccttaccttgcttatatacttgataccctggtctttgcatttagtaaa
taccagcataagaacctgctcattctttacgatgccataggaacattagcagattcagta
ggacatcatttaaacaaaccagaatatattcagatgctaatgcctccactgatccagaaa
tggaacatgttaaaggatgaagataaagatctcttccctttacttgagtgcctatcttca
gttgccacagcactgcagtctggattccttccgtactgtgaacctgtgtatcagcgttgt
gtaaacctagtacagaagactcttgcacaagccatgctaaacaatgctcaaccagatcaa
tatgaagctccagataaagattttatgatagtggctcttgatttactgagtggcctggct
gaaggacttggaggcaacattgaacagctggtagcccgaagtaacatcctgacactaatg
tatcagtgcatgcaggataaaatgccagaagttcgacagagttcttttgccctgttaggt
gacctcacaaaagcttgctttcagcatgttaagccttgtatagctgatttcatgccaata
ttgggaaccaacctaaatccagaattcatttcagtctgcaacaatgccacatgggcaatt
ggagaaatctccattcaaatgggtatagagatgcagccttatattcctatggtgttgcac
cagcttgtagaaatcattaacagacccaacacaccaaagacgttgttagagaatacagca
ataacaattggtcgtcttggttacgtttgtcctcaagaggtggcccccatgctacagcag
tttataagaccctggtgcacctctctgagaaacataagagacaatgaggaaaaggattca
gcattccgtggaatttgtaccatgatcagtgtgaatcccagtggcgtaatccaagatttt
atatttttttgtgatgccgttgcatcatggattaacccaaaagatgatctcagagacatg
ttctgtaagatccttcatggatttaaaaatcaagttggcgatgaaaattggaggcgtttc
tctgaccagtttcctcttcccttaaaagagcgtcttgcagctttttatggtgtttaa
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