KEGG   Homo sapiens (human): 4008
Entry
4008              CDS       T01001                                 
Symbol
LMO7, FBX20, FBXO20, LMO7b, LOMP
Name
(RefSeq) LIM domain 7
  KO
K06084  F-box protein 20
Organism
hsa  Homo sapiens (human)
Pathway
hsa04517  IgSF CAM signaling
hsa04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    4008 (LMO7)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    4008 (LMO7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsa04121]
    4008 (LMO7)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     4008 (LMO7)
SSDB
Motif
Pfam: DUF4757 CH PDZ LIM PDZ_2 PDZ_6
Other DBs
NCBI-GeneID: 4008
NCBI-ProteinID: NP_001293009
OMIM: 604362
HGNC: 6646
Ensembl: ENSG00000136153
UniProt: Q8WWI1 F8WD26 F8J2B5
Structure
LinkDB
Position
13:75620434..75859870
AA seq 1631 aa
MEGLEEAEANCSVAFAEAQRWVEAVTEKNFETKDFRASLENGVLLCDLINKLKPGVIKKI
NRLSTPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVKQEETDRRVKNVLIT
LYWLGRKAQSNPYYNGPHLNLKAFENLLGQALTKALEDSSFLKRSGRDSGYGDIWCPERG
EFLAPPRHHKREDSFESLDSLGSRSLTSCSSDITLRGGREGFESDTDSEFTFKMQDYNKD
DMSYRRISAVEPKTALPFNRFLPNKSRQPSYVPAPLRKKKPDKHEDNRRSWASPVYTEAD
GTFSSNQRRIWGTNVENWPTVQGTSKSSCYLEEEKAKTRSIPNIVKDDLYVRKLSPVMPN
PGNAFDQFLPKCWTPEDVNWKRIKRETYKPWYKEFQGFSQFLLLQALQTYSDDILSSETH
TKIDPTSGPRLITRRKNLSYAPGYRRDDLEMAALDPDLENDDFFVRKTGAFHANPYVLRA
FEDFRKFSEQDDSVERDIILQCREGELVLPDLEKDDMIVRRIPAQKKEVPLSGAPDRYHP
VPFPEPWTLPPEIQAKFLCVLERTCPSKEKSNSCRILVPSYRQKKDDMLTRKIQSWKLGT
TVPPISFTPGPCSEADLKRWEAIREASRLRHKKRLMVERLFQKIYGENGSKSMSDVSAED
VQNLRQLRYEEMQKIKSQLKEQDQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALE
KSKRSSKTFKEMLQDRESQNQKSTVPSRRRMYSFDDVLEEGKRPPTMTVSEASYQSERVE
EKGATYPSEIPKEDSTTFAKREDRVTTEIQLPSQSPVEEQSPASLSSLRSRSTQMESTRV
SASLPRSYRKTDTVRLTSVVTPRPFGSQTRGISSLPRSYTMDDAWKYNGDVEDIKRTPNN
VVSTPAPSPDASQLASSLSSQKEVAATEEDVTRLPSPTSPFSSLSQDQAATSKATLSSTS
GLDLMSESGEGEISPQREVSRSQDQFSDMRISINQTPGKSLDFGFTIKWDIPGIFVASVE
AGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYGKAGSPET
KWIDATSGIYNSEKSSNLSVTTDFSESLQSSNIESKEINGIHDESNAFESKASESISLKN
LKRRSQFFEQGSSDSVVPDLPVPTISAPSRWVWDQEEERKRQERWQKEQDRLLQEKYQRE
QEKLREEWQRAKQEAERENSKYLDEELMVLSSNSMSLTTREPSLATWEATWSEGSKSSDR
EGTRAGEEERRQPQEEVVHEDQGKKPQDQLVIERERKWEQQLQEEQEQKRLQAEAEEQKR
PAEEQKRQAEIERETSVRIYQYRRPVDSYDIPKTEEASSGFLPGDRNKSRSTTELDDYST
NKNGNNKYLDQIGNMTSSQRRSKKEQVPSGAELERQQILQEMRKRTPLHNDNSWIRQRSA
SVNKEPVSLPGIMRRGESLDNLDSPRSNSWRQPPWLNQPTGFYASSSVQDFSRPPPQLVS
TSNRAYMRNPSSSVPPPSAGSVKTSTTGVATTQSPTPRSHSPSASQSGSQLRNRSVSGKR
ICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQLYCNDCY
LRFKSGRPTAM
NT seq 4896 nt   +upstreamnt  +downstreamnt
atggaagggctggaggaggcagaggccaactgctccgtggcgttcgctgaggctcagaga
tgggtggaggcagtaacagagaagaattttgaaacaaaagattttcgagcctctctagaa
aatggtgttctgctgtgtgatttgattaataagcttaaacctggcgtcattaagaagatc
aatagactgtctacaccaatagcaggattggataatataaacgttttcttgaaagcttgt
gaacagattggattgaaagaagcccagcttttccatcctggagatctacaggatttatca
aatcgagtcactgtcaagcaagaagagactgacaggagagtgaaaaatgttttgataaca
ttgtactggctgggaagaaaagcacaaagcaacccgtactataatggtccccatcttaat
ttgaaagcgtttgagaatcttttaggacaagcactgacgaaggcactcgaagactccagc
ttcctgaaaagaagtggcagggacagtggctacggtgacatctggtgtcctgaacgtgga
gaatttcttgctcctccaaggcaccataagagagaagattcctttgaaagcttggactct
ttgggctcgaggtcattgacaagctgctcctctgatatcacgttgagaggggggcgtgaa
ggttttgaaagtgacacagattcggaatttacatttaagatgcaggattataataaagat
gatatgtcgtatcgaaggatttcggctgttgagccaaagactgcgttacccttcaatcgt
tttttacccaacaaaagtagacagccatcctatgtaccagcacctctgagaaagaaaaag
ccagacaaacatgaggataacagaagaagttgggcaagcccggtttatacagaagcagat
ggaacattttcaagtaatcagaggaggatttggggcaccaatgtggagaactggccaact
gtacaaggaacttcaaagtcctcttgttatttggaagaggaaaaagcaaagacaagaagc
atacccaacattgtaaaggatgatctttatgtgcgcaagctcagtccagtcatgccaaac
ccagggaatgcttttgatcagtttcttcccaaatgttggaccccagaagatgtgaactgg
aaaagaataaaaagggaaacttataagccatggtataaagaatttcagggattcagtcag
tttttactgcttcaggccctccaaacatactctgatgacatcttgtcttctgaaacacat
accaaaattgatcccacttctggcccaaggctcataacccgcaggaagaatctctcttat
gcaccaggctatagaagagatgacctcgagatggcagccctggatcctgacttagagaat
gatgatttctttgtcagaaagactggggctttccatgcaaatccatatgttctccgagct
tttgaagactttagaaagttctctgagcaagatgattctgtagagcgagatataatttta
cagtgtagagaaggtgaacttgtacttccggatttggaaaaagatgatatgattgttcgc
cgaattccagcacagaagaaagaagtgccgctgtctggggccccagatagataccaccca
gtcccttttcccgaaccctggactcttcctccagaaattcaagcaaaatttctctgtgta
cttgaaaggacatgcccatccaaagaaaaaagtaatagctgtagaatattagttccttca
tatcggcagaagaaagatgacatgctgacacgtaagattcagtcctggaaactgggaact
accgtgcctcccatcagtttcacccctggcccctgcagtgaggctgacttgaagagatgg
gaggccatccgggaggccagcagacttaggcacaagaaaaggctgatggtggagagactc
tttcaaaagatttatggtgagaatgggagtaagtccatgagtgatgtcagcgcagaagat
gttcaaaacttgcgtcagctgcgttacgaggagatgcagaaaataaaatcacaattaaaa
gaacaagatcagaaatggcaggatgaccttgcaaaatggaaagatcgtcgaaaaagttac
acttcagatctgcagaagaaaaaagaagagagagaagaaattgaaaagcaggcacttgag
aagtctaagagaagctctaagacgtttaaggaaatgctgcaggacagggaatcccaaaat
caaaagtctacagttccgtcaagaaggagaatgtattcttttgatgatgtgctggaggaa
ggaaagcgaccccctacaatgactgtgtcagaagcaagttaccagagtgagagagtagaa
gagaagggagcaacttatccttcagaaattcccaaagaagattctaccacttttgcaaaa
agagaggaccgtgtaacaactgaaattcagcttccttctcaaagtcctgtggaagaacaa
agcccagcctctttgtcttctctgcgttcacggagcacacaaatggaatcaactcgtgtt
tcagcttctctccccagaagttaccggaaaactgatacagtcaggttaacatctgtggtc
acaccaagaccctttggctctcagacaaggggaatctcatcactccccagatcttacacg
atggatgatgcttggaagtataatggagatgttgaagacattaagagaactccaaacaat
gtggtcagcacccctgcaccaagcccggacgcaagccaactggcttcaagcttatctagc
cagaaagaggtagcagcaacagaagaagatgtgacaaggctgccctctcctacatccccc
ttctcatctctttcccaagaccaggctgccacttctaaagccacattgtcttccacatct
ggtcttgatttaatgtctgaatctggagaaggggaaatctccccacaaagagaagtctca
agatcccaggatcagttcagtgatatgagaatcagcataaaccagacgcctgggaagagt
cttgactttgggtttacaataaaatgggatattcctgggatcttcgtagcatcagttgaa
gcaggtagcccagcagaattttctcagctacaagtagatgatgaaattattgctattaac
aacaccaagttttcatataacgattcaaaagagtgggaggaagccatggctaaggctcaa
gaaactggacacctagtgatggatgtgaggcgctatggaaaggctggttcacctgaaaca
aagtggattgatgcaacttctggaatttacaactcagaaaaatcttcaaatctatctgta
acaactgatttctccgaaagccttcagagttctaatattgaatccaaagaaatcaatgga
attcatgatgaaagcaatgcttttgaatcaaaagcatctgaatccatttctttgaaaaac
ttaaaaaggcgatcacaattttttgaacaaggaagctctgattcggtggttcctgatctt
ccagttccaaccatcagtgccccgagtcgctgggtgtgggatcaagaggaggagcggaag
cggcaggagaggtggcagaaggagcaggaccgcctactgcaggaaaaatatcaacgtgag
caggagaaactgagggaagagtggcaaagggccaaacaggaggcagagagagagaattcc
aagtacttggatgaggaactgatggtcctaagctcaaacagcatgtctctgaccacacgg
gagccctctcttgccacctgggaagctacctggagtgaagggtccaagtcttcagacaga
gaaggaacccgagcaggagaagaggagaggagacagccacaagaggaagttgttcatgag
gaccaaggaaagaagccgcaggatcagcttgttattgagagagagaggaaatgggagcaa
cagcttcaggaagagcaagagcaaaagcggcttcaggctgaggctgaggagcagaagcgt
cctgcggaggagcagaagcgccaggcagagatagagcgggaaacatcagtcagaatatac
cagtacaggaggcctgttgattcctatgatataccaaagacagaagaagcatcttcaggt
tttcttcctggtgacaggaataaatccagatctactactgaactggatgattactccaca
aataaaaatggaaacaataaatatttagaccaaattgggaacatgacctcttcacagagg
agatccaagaaagaacaagtaccatcaggagcagaattggagaggcaacaaatccttcag
gaaatgaggaagagaacaccccttcacaatgacaacagctggatccgacagcgcagtgcc
agtgtcaacaaagagcctgttagtcttcctgggatcatgagaagaggcgaatctttagat
aacctggactccccccgatccaattcttggagacagcctccttggctcaatcagcccaca
ggattctatgcttcttcctctgtgcaagactttagtcgcccaccacctcagctggtgtcc
acatcaaaccgtgcctacatgcggaacccctcctccagcgtgcccccaccttcagctggc
tccgtgaagacctccaccacaggtgtggccaccacacagtcccccaccccgagaagccat
tccccttcagcttcacagtcaggctctcagctgcgtaacaggtcagtcagtgggaagcgc
atatgctcctactgcaataacattctgggcaaaggagccgccatgatcatcgagtccctg
ggtctttgttatcatttgcattgttttaagtgtgttgcctgtgagtgtgacctcggaggc
tcttcctcaggagctgaagtcaggatcagaaaccaccaactgtactgcaacgactgctat
ctcagattcaaatctggacggccaaccgccatgtga

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