Homo sapiens (human): 5097
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Entry
5097 CDS
T01001
Symbol
PCDH1, PC42, PCDH42
Name
(RefSeq) protocadherin 1
KO
K16498
protocadherin delta 1
Organism
hsa
Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsa01009
]
5097 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsa04515
]
5097 (PCDH1)
Protein phosphatases and associated proteins [BR:
hsa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
5097 (PCDH1)
Cell adhesion molecules [BR:
hsa04515
]
Cadherins
Protocadherins
5097 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
5097
NCBI-ProteinID:
NP_002578
OMIM:
603626
HGNC:
8655
Ensembl:
ENSG00000156453
UniProt:
Q08174
A8K0E7
B4E2D8
Structure
PDB
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All DBs
Position
5:complement(141853090..141878410)
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AA seq
1060 aa
AA seq
DB search
MDSGAGGRRCPEAALLILGPPRMEHLRHSPGPGGQRLLLPSMLLALLLLLAPSPGHATRV
VYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL
RECQNQLPGDPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPEN
TNIGSLFPIPLASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDR
ERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVI
QVKANDSDQGANAEIEYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAK
DRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS
DRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVD
SGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVIAEITASDADSGSNAE
LVYSLEPEPAAKGLFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLV
NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENAQVQLSVEQDNGDFVI
QNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPYITAPSN
TSHKLLTPQTRLGETVSQVAAEDFDSGVNAELIYSIAGGNPYGLFQIGSHSGAITLEKEI
ERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAG
DPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK
PSGKASKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPP
GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDY
SYRTNPPKYPSKQVGQPFQLSTPQPLPHPYHGAIWTEVWE
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggacagcggggcgggcggccggcgctgcccggaggcggccctcctgattctggggcct
cccaggatggagcacctgaggcacagcccaggccctggggggcaacggctactgctgccc
tccatgctgctagcactgctgctcctgctggctccatccccaggccacgccactcgggta
gtgtacaaggtgccggaggaacagccacccaacaccctcattgggagcctcgcagccgac
tatggttttccagatgtggggcacctgtacaagctagaggtgggtgccccgtaccttcgc
gtggatggcaagacaggtgacattttcaccaccgagacctccatcgaccgtgaggggctc
cgtgaatgccagaaccagctccctggtgatccctgcatcctggagtttgaggtatctatc
acagacctcgtgcagaatggcagcccccggctgctagagggccagatagaagtacaagac
atcaatgacaacacacccaacttcgcctcaccagtcatcactctggccatccctgagaac
accaacatcggctcactcttccccatcccgctggcttcagaccgtgatgctggtcccaac
ggtgtggcatcctatgagctgcaggctgggcctgaggcccaggagctatttgggctgcag
gtggcagaggaccaggaggagaagcaaccacagctcattgtgatgggcaacctggaccgt
gagcgctgggactcctatgacctcaccatcaaggtgcaggatggcggcagccccccacgc
gccagcagtgccctgctgcgtgtcaccgtgcttgacaccaatgacaacgcccccaagttt
gagcggccctcctatgaggccgaactatctgagaatagccccataggccactcggtcatc
caggtgaaggccaatgactcagaccaaggtgccaatgcagaaatcgaatacacattccac
caggcgcccgaagttgtgaggcgtcttcttcgactggacaggaacactggacttatcact
gttcagggcccggtggaccgtgaggacctaagcaccctgcgcttctcagtgcttgctaag
gaccgaggcaccaaccccaagagtgcccgtgcccaggtggttgtgaccgtgaaggacatg
aatgacaatgcccccaccattgagatccggggcatagggctagtgactcatcaagatggg
atggctaacatctcagaggatgtggcagaggagacagctgtggccctggtgcaggtgtct
gaccgagatgagggagagaatgcagctgtcacctgtgtggtggcaggtgatgtgcccttc
cagctgcgccaggccagtgagacaggcagtgacagcaagaagaagtatttcctgcagact
accaccccgctagactacgagaaggtcaaagactacaccattgagattgtggctgtggac
tctggcaaccccccactctccagcactaactccctcaaggtgcaggtggtggacgtcaat
gacaacgcacctgtcttcactcagagtgtcactgaggtcgccttcccggaaaacaacaag
cctggtgaagtgattgctgagatcactgccagtgatgctgactctggctctaatgctgag
ctggtttactctctggagcctgagccggctgctaagggcctcttcaccatctcacccgag
actggagagatccaggtgaagacatctctggatcgggaacagcgggagagctatgagttg
aaggtggtggcagctgaccggggcagtcctagcctccagggcacagccactgtccttgtc
aatgtgctggactgcaatgacaatgaccccaaatttatgctgagtggctacaacttctca
gtgatggagaacatgccagcactgagtccagtgggcatggtgactgtcattgatggagac
aagggggagaatgcccaggtgcagctctcagtggagcaggacaacggtgactttgttatc
cagaatggcacaggcaccatcctatccagcctgagctttgatcgagagcaacaaagcacc
tacaccttccagctgaaggcagtggatggtggcgtcccacctcgctcagcttacgttggt
gtcaccatcaatgtgctggacgagaatgacaacgcaccctatatcactgccccttctaac
acctctcacaagctgctgaccccccagacacgtcttggtgagacggtcagccaggtggca
gccgaggactttgactctggtgtcaatgctgagctgatctacagcattgcaggtggcaac
ccttatggactcttccagattgggtcacattcaggtgccatcaccctggagaaggagatt
gagcggcgccaccatgggctacaccgcctggtggtgaaggtcagtgaccgcggcaagccc
ccacgctatggcacagccttggtccatctttatgtcaatgagactctggccaaccgcacg
ctgctggagaccctcctgggccacagcctggacacgccgctggatattgacattgctggg
gatccagaatatgagcgctccaagcagcgtggcaacattctctttggtgtggtggctggt
gtggtggccgtggccttgctcatcgccctggcggttcttgtgcgctactgcagacagcgg
gaggccaaaagtggttaccaggctggtaagaaggagaccaaggacctgtatgcccccaag
cccagtggcaaggcctccaagggaaacaaaagcaaaggcaagaagagcaagtccccaaag
cccgtgaagccagtggaggacgaggatgaggccgggctgcagaagtccctcaagttcaac
ctgatgagcgatgcccctggggacagtccccgcatccacctgcccctcaactacccacca
ggcagccctgacctgggccgccactatcgctctaactccccactgccttccatccagctg
cagccccagtcaccctcagcctccaagaagcaccaggtggtacaggacctgccacctgca
aacacattcgtgggcaccggggacaccacgtccacgggctctgagcagtactccgactac
agctaccgcaccaacccccccaaataccccagcaagcaggtaggccagccctttcagctc
agcacaccccagcccctaccccacccctaccacggagccatctggaccgaggtgtgggag
tga
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