KEGG   Homo sapiens (human): 5100
Entry
5100              CDS       T01001                                 
Symbol
PCDH8, ARCADLIN, PAPC
Name
(RefSeq) protocadherin-8 isoform 1 precursor
  KO
K28835  protocadherin-8, delta 2
Organism
hsa  Homo sapiens (human)
Pathway
hsa04519  Cadherin signaling
Network
nt06549  Cadherin signaling
  Element
N02003  deltaPCDH8/10/18/20 to Wnt signaling
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    5100 (PCDH8)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    5100 (PCDH8)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Protocadherins
   5100 (PCDH8)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Ig_CLSTN
Other DBs
NCBI-GeneID: 5100
NCBI-ProteinID: NP_002581
OMIM: 603580
HGNC: 8660
Ensembl: ENSP00000367177.3
UniProt: O95206
Structure
LinkDB
Position
13:complement(52842889..52848640)
AA seq 1070 aa
MSPVRRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVH
VEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQTVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGARTPPEARRLFRLD
PRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRIRDVNDNAPDIAITPLA
APGAPATSPFAAAAAAAALGGADASSPAGAGTPEAGATSLVPEGAARESLVALVSTSDRD
SGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLRTV
RPYTVRVGDENDNAPLFTRPVYEVSVRENNPPGAYLATVAARDRDLGRNGQVTYRLLEAE
VGRAGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVL
DQNDHAPVLVHPAPANGSLEVAVPGRTAKDTVVARVQARDADEGANGELAFELQQQEPRE
AFAIGRRTGEILLTGDLSQEPPGRVFRALLVISDGGRPPLTTTATVSFVVTAGGGRGPAA
PASAGSPERSRPPGSRLGVSGSVLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKE
VRKGGALREERPGAAGGGASAPGSPEEAARGAGPRPNMFDVLTFPGTGKAPFGSPAADAP
PPAVAAAEVPGSEGGSATGESACHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGHS
FNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGH
SDRCWSPSCSGPNAHPSPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEK
VLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKGANENV
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgagtcctgtgaggcgttggggcagcccctgccttttccccttgcagctcttcagcctc
tgctgggtgctctcagtggcccagagcaaaacagtccgatacagcaccttcgaggaggat
gcccccggcacggtcatcgggaccctggccgaggacctgcatatgaaagtatcgggtgac
acaagcttccgcctgatgaagcaattcaacagctctctgctccgggtgcgcgaaggcgac
gggcagctgaccgtcggggacgccggcctggaccgcgagcggctgtgtggccaggccccg
cagtgcgtgctggccttcgatgtggtcagcttctcgcaggagcagttccggctggtgcac
gtggaggtagaggtgagggacgtcaacgaccacgcgccgcgcttccccagggcccagatc
ccggtagaggtgtccgagggtgcggcagtgggcacgcgcatccccttggaggtgccggtg
gacgaggacgtgggcgccaacgggctgcagaccgtgcgcctggccgagccgcacagcccc
tttcgcgtggagctgcagacgcgagcggacggcgctcagtgcgcagacctggtgctgctg
caggagctggaccgcgagagccaggccgcctacagcctggagctggtggcccaggacggc
ggccgcccgccgcgctccgccacggctgccctcagcgtgcgcgtcctggatgcgaatgac
cacagcccggccttcccgcagggcgccgtggccgaagtggagctggcggaagacgcgccc
gtgggctccctgcttctcgacctggacgcagccgaccccgacgagggacctaacggcgac
gtggtgttcgcatttggcgcccgcaccccgccggaggcgcgccgcctctttcggcttgac
ccgcgatcaggccgcctcaccctggccgggcccgtggactacgagcgtcaggacacctac
gagctggacgtgcgggcgcaggaccgcggacccgggccccgcgctgccacctgcaaggtc
atcgtgcgcatccgagacgtcaatgacaacgcacccgacatcgccatcaccccgctggcc
gccccaggcgcgccggcaacctcacccttcgccgctgccgccgccgccgctgcactcggg
ggagcggacgctagctcgccggcgggagccgggacgccggaggctggtgccacttcgctg
gtgccggagggggcggcgcgcgagagcctggtggccctggtcagcacctcggacagggac
tcgggcgccaacgggcaagtgcgctgcgccctctatgggcacgagcacttccggctgcag
ccggcctacgcgggcagctacctggtggtgaccgcggcgtcgctggaccgcgaacgcatc
gccgagtacaacttgacgctggtggccgaggatcgcggcgcgcccccgctgcgcacagtg
cggccctacacggtgcgtgtgggcgacgagaacgacaacgcgccgctcttcacgcggccg
gtctatgaggtgtcggtgcgcgagaacaacccgccaggcgcctacctggccacggtggcc
gcccgcgaccgggacctgggccgcaacggccaggtcacctaccggctgctggaggccgag
gtgggccgcgccgggggcgccgtgtccacttatgtctcggtggacccagctaccggagcc
atctacgcgctgcgcagcttcgactatgagacgctgcgccaactcgacgttcgcatccaa
gctagcgacggcggctcccctcagctttccagcagcgccctagtgcaagtgcgcgtgctg
gaccagaacgaccatgcgccagtcctggtgcacccggcgccagccaatggctccctagaa
gtggcggtgcctgggcgcaccgcaaaggacacggttgtggcccgtgtgcaggcccgggat
gcagacgagggagccaacggggagctggcgttcgagctgcagcagcaggagccgcgcgaa
gccttcgccatcggccgccgcacgggggagatactgctcaccggcgacctctcgcaggag
ccacccggtcgcgtgttcagggcgctcctggtcatatccgacggcggccgtcccccgctc
accaccaccgcaactgtcagcttcgtggtaacagcagggggcgggcgtgggccggctgcg
cctgccagtgcaggaagcccggagcgttcccgcccgcctggctctcggctcggggtgtcc
gggtcggtgctgcaatgggacacgccgctgatcgtcatcatcgtgctggccgggagctgc
acgctgctgctggccgccatcatcgccatcgccaccacctgcaaccgccgcaagaaggag
gtgcgcaaagggggggccctccgggaagagcggcccggggcggcgggcggcggagcctcg
gctcccggctccccggaggaggccgcccggggagccgggcccaggcccaacatgttcgac
gtgctcaccttccctggcaccggcaaagcgccctttggcagccccgcggcggacgcgcct
ccgcctgcggtcgccgcggccgaagtgccgggctcagagggcggcagcgccactggggaa
agcgcctgtcacttcgaggggcagcagcggctccgcggcgcgcacgccgagccctacggt
gcctccccgggttttggaaaggagccggcgccccctgtggcggtgtggaaaggacactcc
ttcaacaccatttctggcagagaagcagagaagttcagcggcaaagacagcggtaaaggg
gacagtgatttcaacgacagcgattccgacatcagcggggacgctctgaaaaaggatctc
atcaaccacatgcagagtggactgtgggcgtgcaccgctgagtgtaagatcctgggccac
tctgaccgctgctggagcccatcctgcagcgggcccaacgcacatccatcgcctcaccca
ccagcccagatgtcaaccttctgtaagagcacgtcactgcctcgggatcctctgcgcagg
gacaattactaccaggcccagctgcccaagacagtggggctgcagagcgtctatgagaaa
gtactgcacagagactatgacaggacagtcactctgctctcccctccccgtccagggagg
ctcccagacctgcaggagattggagtacccctctaccagtcccctcctggcaggtacctg
tccccgaagaagggagccaatgaaaatgtgtaa

KEGG   Homo sapiens (human): 57575
Entry
57575             CDS       T01001                                 
Symbol
PCDH10, OL-PCDH, PCDH19
Name
(RefSeq) protocadherin-10 isoform 1 precursor
  KO
K28836  protocadherin-10, delta 2
Organism
hsa  Homo sapiens (human)
Pathway
hsa04519  Cadherin signaling
Network
nt06549  Cadherin signaling
  Element
N02003  deltaPCDH8/10/18/20 to Wnt signaling
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    57575 (PCDH10)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    57575 (PCDH10)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Protocadherins
   57575 (PCDH10)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_FAT4_N Ig_CLSTN Ig_Cad99C_N Cadherin_CELSR2_9th TMEM98_N GP38
Other DBs
NCBI-GeneID: 57575
NCBI-ProteinID: NP_116586
OMIM: 608286
HGNC: 13404
Ensembl: ENSP00000264360.4
UniProt: Q9P2E7 X5D999 Q9NSR3
Structure
LinkDB
Position
4:133149294..133208606
AA seq 1040 aa
MIVLLLFALLWMVEGVFSQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARGFQTVPNSR
TPYLDLNLETGVLYVNEKIDREQICKQSPSCVLHLEVFLENPLELFQVEIEVLDINDNPP
SFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEITPNSYFSLDVQTQGDGNRF
AELVLEKPLDREQQAVHRYVLTAVDGGGGGGVGEGGGGGGGAGLPPQQQRTGTALLTIRV
LDSNDNVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQNGEVVYSFSSHISPRAREL
FGLSPRTGRLEVSGELDYEESPVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISF
STVKEAVSEGAAPGTVVALFSVTDRDSEENGQVQCELLGDVPFRLKSSFKNYYTIVTEAP
LDREAGDSYTLTVVARDRGEPALSTSKSIQVQVSDVNDNAPRFSQPVYDVYVTENNVPGA
YIYAVSATDRDEGANAQLAYSILECQIQGMSVFTYVSINSENGYLYALRSFDYEQLKDFS
FQVEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLL
TRVAAVDADDGENARLTYSIVRGNEMNLFRMDWRTGELRTARRVPAKRDPQRPYELVIEV
RDHGQPPLSSTATLVVQLVDGAVEPQGGGGSGGGGSGEHQRPSRSGGGETSLDLTLILII
ALGSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLCCCCCGGGGSTCCGRQARARKK
KLSKSDIMLVQSSNVPSNPAQVPIEESGGFGSHHHNQNYCYQVCLTPESAKTDLMFLKPC
SPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSNETKHQRAELSYLVDRPRRVNSSAF
QEADIVSSKDSGHGDSEQGDSDHDATNRAQSAGMDLFSNCTEECKALGHSDRCWMPSFVP
SDGRQAADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHSTLERKELDG
LLTNTRAPYKPPYLTRKRIC
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgattgtgctattattgtttgccttgctctggatggtggaaggagtcttttcccagctt
cactacacggtacaggaggagcaggaacatggcactttcgtggggaatatcgctgaagat
ctgggtctggacattacaaaactttcggctcgcgggtttcagacggtgcccaactcaagg
accccttacttagacctcaacctggagacaggggtgctgtacgtgaacgagaaaatagac
cgcgaacaaatctgcaaacagagcccctcctgtgtcctgcacctggaggtctttctggag
aaccccctggagctgttccaggtggagatcgaggtgctggacattaatgacaaccccccc
tctttcccggagccagacctgacggtggaaatctctgagagcgccacgccaggcactcgc
ttccccttggagagcgcattcgacccagacgtgggcaccaactccttgcgcgactacgag
atcacccccaacagctacttctccctggacgtgcagacccagggggatggcaaccgattc
gctgagctggtgctggagaagccactggaccgagagcagcaagcggtgcaccgctacgtg
ctgaccgcggtggacggaggaggtgggggaggagtaggagaaggagggggaggtggcggg
ggagcaggcctgcccccccagcagcagcgcaccggcacggccctactcaccatccgagtg
ctggactccaatgacaatgtgcccgctttcgaccaacccgtctacactgtgtccctacca
gagaactctcccccaggcactctcgtgatccagctcaacgccaccgacccggacgagggc
cagaacggtgaggtcgtgtactccttcagcagccacatttcgccccgggcgcgggagctt
ttcggactctcgccgcgcactggcagactggaggtaagcggcgagttggactatgaagag
agcccagtgtaccaagtgtacgtgcaagccaaggacctgggccccaacgccgtgcctgcg
cactgcaaggtgctagtgcgagtactggatgctaatgacaacgcgccagagatcagcttc
agcaccgtgaaggaagcggtgagtgagggcgcggcgcccggcactgtggtggcccttttc
agcgtgactgaccgcgactcagaggagaatgggcaggtgcagtgcgagctactgggagac
gtgcctttccgcctcaagtcttcctttaagaattactacaccatcgttaccgaagccccc
ctggaccgagaggcgggggactcctacaccctgactgtagtggctcgggaccggggcgag
cctgcgctctccaccagtaagtcgatccaggtacaagtgtcggatgtgaacgacaacgcg
ccgcgtttcagccagccggtctacgacgtgtatgtgactgaaaacaacgtgcctggcgcc
tacatctacgcggtgagcgccaccgaccgggatgagggcgccaacgcccagcttgcctac
tctatcctcgagtgccagatccagggcatgagcgtcttcacctacgtttctatcaactct
gagaacggctacttgtacgccctgcgctccttcgactatgagcagctgaaggacttcagt
tttcaggtggaagcccgggacgctggcagcccccaggcgctggctggtaacgccactgtc
aacatcctcatagtggatcaaaatgacaacgcccctgccatcgtggcgcctctaccaggg
cgcaacgggactccagcgcgtgaggtgctgccccgctcggcggagccgggttacctgctc
acccgcgtggccgccgtggacgcggacgacggcgagaacgcccggctcacttacagcatc
gtgcgtggcaacgaaatgaacctctttcgcatggactggcgcaccggggagctgcgcaca
gcacgccgagtcccggccaagcgcgacccccagcggccttatgagctggtgatcgaggtg
cgcgaccatgggcagccgcccctttcctccaccgccaccctggtggttcagctggtggat
ggcgccgtggagccccagggcgggggcgggagcggaggcggagggtcaggagagcaccag
cgccccagtcgctctggcggcggggaaacctcgctagacctcaccctcatcctcatcatc
gcgttgggctcggtgtccttcatcttcctgctggccatgatcgtgctggccgtgcgttgc
caaaaagagaagaagctcaacatctatacttgtctggccagcgattgctgcctctgctgc
tgctgctgcggtggcggaggttcgacctgctgtggccgccaagcccgggcgcgcaagaag
aaactcagcaagtcagacatcatgctggtgcagagctccaatgtacccagtaacccggcc
caggtgccgatagaggagtccgggggctttggctcccaccaccacaaccagaattactgc
tatcaggtatgcctgacccctgagtccgccaagaccgacctgatgtttcttaagccctgc
agcccttcgcggagtacggacactgagcacaacccctgcggggccatcgtcaccggttac
accgaccagcagcctgatatcatctccaacggaagcattttgtccaacgagactaaacac
cagcgagcagagctcagctatctagttgacagacctcgccgagttaacagttctgcattc
caggaagccgacatagtaagctctaaggacagtggtcatggagacagtgaacagggagat
agtgatcatgatgccaccaaccgtgcccagtcagctggtatggatctcttctccaattgc
actgaggaatgtaaagctctgggccactcagatcggtgctggatgccttcttttgtccct
tctgatggacgccaggctgctgattatcgcagcaatctgcatgttcctggcatggactct
gttccagacactgaggtgtttgaaactccagaagcccagcctggggcagagcggtccttt
tccacctttggcaaagagaaggcccttcacagcactctggagaggaaggagctggatgga
ctgctgactaatacgcgagcgccttacaaaccaccatatttgacacggaaaaggatatgc
tag

KEGG   Homo sapiens (human): 54510
Entry
54510             CDS       T01001                                 
Symbol
PCDH18, PCDH68L
Name
(RefSeq) protocadherin-18 isoform 1 precursor
  KO
K16499  protocadherin 12/17/18, delta 2
Organism
hsa  Homo sapiens (human)
Pathway
hsa04519  Cadherin signaling
Network
nt06549  Cadherin signaling
  Element
N02003  deltaPCDH8/10/18/20 to Wnt signaling
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    54510 (PCDH18)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    54510 (PCDH18)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Protocadherins
   54510 (PCDH18)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Ig_CLSTN Cadherin_FAT4_N BBS1 TMEM154 Ig_BT4661_3rd PAH ATG31 MPS-4 Cadherin_C_2 Syndecan DUF3418
Other DBs
NCBI-GeneID: 54510
NCBI-ProteinID: NP_061908
OMIM: 608287
HGNC: 14268
Ensembl: ENSP00000355082.4
UniProt: Q9HCL0 Q5HYG2
Structure
LinkDB
Position
4:complement(137518918..137532494)
AA seq 1135 aa
MHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLPN
PSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMS
PGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFHV
TRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQD
KGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQQ
QHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPSL
DTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq 3408 nt   +upstreamnt  +downstreamnt
atgcaccaaatgaatgctaaaatgcactttaggtttgtttttgcacttctgatagtatct
ttcaaccacgatgtactgggcaagaatttgaaatacaggatttatgaggaacagagggtt
ggatcagtaattgcaagactatcagaggatgtggctgatgttttattgaagcttcctaat
ccttctactgttcgatttcgagccatgcagaggggaaattctcctctacttgtagtaaac
gaggataatggggaaatcagcataggggctacaattgaccgtgaacaactgtgccagaaa
aacttgaactgttccatagagtttgatgtgatcactctacccacagagcatctgcagctt
ttccatattgaagttgaagtgctggatattaatgacaattctccccagttttcaagatct
ctcatacctattgagatatctgagagtgcagcagttgggactcgcattcccctggacagt
gcatttgatccagatgttggggaaaattccctccacacatactcgctctctgccaatgat
ttttttaatatcgaggttcggaccaggactgatggagccaagtatgcagaactcatagtg
gtcagagagttagatcgggagctgaagtcaagctacgagcttcagctcactgcctcagac
atgggagtacctcagaggtctggctcatccatactaaaaataagcatttcagactccaat
gacaacagccctgcttttgagcagcaatcttatataatacaactcttagaaaactccccg
gttggcactttgctcttagatctgaatgccacggatccagatgagggcgctaatgggaaa
attgtatattccttcagcagtcatgtgtctcccaaaattatggagacttttaaaattgat
tctgaaagaggacatttgactcttttcaagcaagtggattatgaaatcaccaaatcctat
gagattgatgttcaggctcaagatttgggtccaaattcaatcccagcccattgcaaaatt
ataattaaggttgtggatgttaatgacaataaacctgaaattaacatcaacctcatgtcc
cctggaaaagaagaaatatcttatatttttgaaggggatcctattgatacatttgttgct
ttggtcagagttcaggacaaggattctgggctgaatggagaaatagtttgtaagcttcat
ggacatggtcactttaaacttcagaagacatatgaaaacaattatttaatcttaactaat
gccacactggatagagaaaagagatctgagtatagtttgactgtaatcgctgaggacagg
gggacacccagtctctctacagtgaaacattttacagttcaaatcaatgatatcaatgac
aatccaccccacttccagagaagccgatatgaatttgtaatttcagaaaataactcacca
ggggcatatatcaccactgttacagccacagatcctgatcttggagaaaatgggcaagtg
acatacaccatcttggagagttttattctaggaagttccataactacatatgtaaccatt
gacccatctaatggagccatctatgccctcagaatctttgatcatgaagaagtgagtcag
atcacttttgtggtagaagcaagagatggaggaagcccgaagcaactggtaagcaatacc
acagttgtgctcaccatcattgacgaaaatgacaacgttcctgtggttatagggcctgca
ttgcgtaataatacggcagaaatcaccattcccaaaggggctgaaagtggctttcatgtc
acaagaataagggcaattgacagagactctggtgtgaatgctgaactcagctgcgccata
gtagcaggtaatgaggagaatatcttcataattgatccacgatcatgtgacatccatacc
aacgttagcatggattctgttccctacacagaatgggagctgtcagttatcattcaggac
aaaggcaatcctcagctacataccaaagtccttctgaagtgcatgatctttgaatatgca
gagtcggtgacaagtacagcaatgacttcagtaagccaggcatccttggatgtctccatg
ataataattatttccttaggagcaatttgtgcagtgttgctggttattatggtgctattt
gcaactaggtgtaaccgcgagaagaaagacactagatcctataactgcagggtggccgaa
tcaacttaccagcaccacccaaaaaggccatcccggcagattcacaaaggggacatcaca
ttggtgcctaccataaatggcactctgcccatcagatctcatcacagatcgtctccatct
tcatctcctaccttagaaagagggcagatgggcagccggcagagtcacaacagtcaccag
tcactcaacagtttggtgacaatctcatcaaaccacgtgccagagaatttctcattagaa
ctcacccacgccactcctgctgttgagcaggtctctcagcttctttcaatgcttcaccag
gggcaatatcagccaagaccaagttttcgaggaaacaaatattccaggagctacagatat
gcccttcaagacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaggca
ggagacagtgattatgatttggggcgagattctccaatagataggctgttgggtgaagga
ttcagcgacctgtttctcacagatggaagaattccagcagctatgagactctgcacggag
gagtgcagggtcctgggacactctgaccagtgctggatgccaccactgccctcaccgtct
tctgattataggagtaacatgttcattccaggggaagaattcccaacgcaaccccagcag
cagcatccacatcagagtcttgaggatgacgctcagcctgcagattccggtgaaaagaag
aagagtttttccacctttggaaaggactccccaaacgatgaggacactggggataccagc
acatcatctctgctctcggaaatgagcagtgtgttccagcgtctcttaccgccttccctg
gacacctattctgaatgcagtgaggtggatcggtccaactccctggagcgcaggaaggga
cccttgccagccaaaactgtgggttacccacagggggtagcggcatgggcagccagtacg
cattttcaaaatcccaccaccaactgtgggccgccacttggaactcactccagtgtgcag
ccttcttcaaaatggctgccagccatggaggagatccctgaaaattatgaggaagatgat
tttgacaatgtgctcaaccacctcaatgatgggaaacacgaactcatggatgccagtgaa
ctggtggcagagattaacaaactgcttcaagatgtccgccagagctag

KEGG   Homo sapiens (human): 64881
Entry
64881             CDS       T01001                                 
Symbol
PCDH20, PCDH13
Name
(RefSeq) protocadherin-20 precursor
  KO
K16498  protocadherin delta 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03273  Virion - Lassa virus and SFTS virus
hsa04519  Cadherin signaling
Network
nt06549  Cadherin signaling
  Element
N02002  delta1PCDH to PP1alpha signaling
N02003  deltaPCDH8/10/18/20 to Wnt signaling
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    64881 (PCDH20)
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    64881 (PCDH20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsa01009]
    64881 (PCDH20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    64881 (PCDH20)
Protein phosphatases and associated proteins [BR:hsa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     64881 (PCDH20)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Protocadherins
   64881 (PCDH20)
SSDB
Motif
Pfam: Cadherin Cadherin_FAT4_N Ig_CLSTN Cadherin_2 Cadherin_CELSR2_9th Ig_Cad99C_N RET_CLD1
Other DBs
NCBI-GeneID: 64881
NCBI-ProteinID: NP_073754
OMIM: 614449
HGNC: 14257
Ensembl: ENSP00000387250.3
UniProt: Q8N6Y1 B3KSZ7
LinkDB
Position
13:complement(61409685..61415849)
AA seq 951 aa
MRGRGNARSSQALGVSWCPATWHPRLDMGRLHRPRSSTSYRNLPHLFLFFLFVGPFSCLG
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLLPRSAGRPDPQSQLPERTGAEWNPPLSFS
LASRGLSGQYVTLDNRSGELHTSAQEIDREALCVEGGGGTAWSGSVSISSSPSDSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENAPVNTRLAIEHPAVDPDVG
INGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDRETQDQYVSIIIAEDGGSPPL
LGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIAAVQAVDKDLGTNAQITYSYS
QKVPQASKDLFHLDENTGVIKLFSKIGGSVLESHKLTILANGPGCIPAVITALVSIIKVI
FRPPEIVPRYIANEIDGVVYLKELEPVNTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSPY
KPYNNEYLLETTKPMDYELQQFYEVAVVAWNSEGFHVKRVIKVQLLDDNDNAPIFLQPLI
ELTIEENNSPNAFLTKLYATDADSEERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDRE
EKEKYRYTVRAVDCGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGEP
ALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVESVSCMPTLVALSVISLGS
ITLVTGMGIYICLRKGEKHPREDENLEVQIPLKGKIDLHMRERKPMDISNI
NT seq 2856 nt   +upstreamnt  +downstreamnt
atgcgcggccgagggaatgcgcgcagctcacaggccctgggagtgagctggtgcccggcg
acctggcacccgcgcctggatatggggcgtctacatcgtcccaggagcagcaccagctac
aggaacctgccgcatctgtttctgtttttcctcttcgtgggacccttcagctgcctcggg
agttacagccgggccaccgagcttctgtacagcctaaacgagggactacccgcgggggtg
ctcatcggcagcctggccgaggacctgcggctgctgcccaggtctgcagggaggccggac
ccgcagtcgcagctgccagagcgcaccggtgctgagtggaacccccctctctccttcagc
ctggcctcccggggactgagtggccagtacgtgaccctagacaaccgctctggggagctg
cacacttcagctcaggagatcgacagggaggccctgtgtgttgaagggggtggagggact
gcgtggagcggcagcgtttccatctcctcctctccttctgactcttgtcttttgctgctg
gatgtgcttgtcctgcctcaggaatacttcaggtttgtgaaggtgaagatcgccatcaga
gacatcaatgacaacgccccgcagttccctgtttcccagatctcggtgtgggtcccggaa
aatgcacctgtaaacacccgactggccatagagcatcctgctgtggacccagatgtaggc
attaatggggtacagacctatcgcttactggactaccatggtatgttcaccctggacgtg
gaggagaatgagaatggggagcgcaccccctacctaattgtcatgggtgctttggacagg
gaaacccaggaccagtatgtgagcatcatcatagctgaggatggtgggtctccaccactt
ttgggcagtgccactctcaccattggcatcagtgacattaatgacaattgccctctcttc
acagactcacaaatcaatgtcactgtgtatgggaatgctacagtgggcaccccaattgca
gctgtccaggctgtggataaagacttggggaccaatgctcaaattacttattcttacagt
cagaaagttccacaagcatctaaggatttatttcacctggatgaaaacactggagtcatt
aaacttttcagtaagattggaggaagtgttctggagtcccacaagctcaccatccttgct
aatggaccaggctgcatccctgctgtaatcactgctcttgtgtccattattaaagttatt
ttcagaccccctgaaattgtccctcgttacatagcaaacgagatagatggtgtggtttat
ctgaaagaactggaacccgttaacactcccattgcgtttttcaccataagagatccagaa
ggtaaatacaaggttaactgctacctggatggtgaagggccgtttaggttatcaccttac
aaaccatacaataatgaatatttactagagaccacaaaacctatggactatgagctacag
cagttctatgaagtagctgtggtggcttggaactctgagggatttcatgtcaaaagggtc
attaaagtgcaacttttagatgacaatgataatgctccaattttccttcaacccttaata
gaactaaccatcgaagagaacaactcacccaatgcctttttgactaagctgtatgctaca
gatgccgacagcgaggagagaggccaagtttcatattttctgggacctgatgctccatca
tatttttccttagacagtgtcacaggaattctgacagtttctactcagctggaccgagaa
gagaaagaaaagtacagatacactgtcagagctgttgactgtgggaagccacccagagaa
tcagtagccactgtggccctcacagtgttggataaaaatgacaacagtcctcggtttatc
aacaaggacttcagcttttttgtgcctgaaaactttccaggctatggtgagattggagta
attagtgtaacagatgctgacgctggacgaaatggatgggtcgccctctctgtggtgaac
cagagtgatatttttgtcatagatacaggaaagggtatgctgagggctaaagtctctttg
gacagagagcagcaaagctcctatactttgtgggttgaagctgttgatgggggtgagcct
gccctctcctctacagcaaaaatcacaattctccttctagatatcaatgacaaccctcct
cttgttttgtttcctcagtctaatatgtcttatctgttagtactgccttctactctgcca
ggctccccggttacagaagtctatgctgtcgacaaagacacaggcatgaatgctgtcata
gcttacagcatcatagggagaagaggtcctaggcctgagtccttcaggattgaccctaaa
actggcaacattactttggaagaggcattgctgcagacagattatgggctccatcgctta
ctggtgaaagtgagtgatcatggttatcccgagcctctccactccacagtcatggtgaac
ctatttgtcaatgacactgtcagtaatgagagttacattgagagtcttttaagaaaagaa
ccagagattaatatagaggagaaagaaccacaaatctcaatagaaccgactcataggaag
gtagaatctgtgtcttgtatgcccaccttagtagctctgtctgtaataagcttgggttcc
atcacactggtcacagggatgggcatatacatctgtttaaggaaaggggaaaagcatccc
agggaagatgaaaatttggaagtacagattccactgaaaggaaaaattgacttgcatatg
cgagagagaaagccaatggatatttctaatatttga

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