Homo sapiens (human): 5100
Help
Entry
5100 CDS
T01001
Symbol
PCDH8, ARCADLIN, PAPC
Name
(RefSeq) protocadherin-8 isoform 1 precursor
KO
K28835
protocadherin-8, delta 2
Organism
hsa
Homo sapiens (human)
Pathway
hsa04519
Cadherin signaling
Network
nt06549
Cadherin signaling
Element
N02003
deltaPCDH8/10/18/20 to Wnt signaling
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
5100 (PCDH8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsa04515
]
5100 (PCDH8)
Cell adhesion molecules [BR:
hsa04515
]
Cadherins
Protocadherins
5100 (PCDH8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Ig_CLSTN
Motif
Other DBs
NCBI-GeneID:
5100
NCBI-ProteinID:
NP_002581
OMIM:
603580
HGNC:
8660
Ensembl:
ENSP00000367177.3
UniProt:
O95206
Structure
PDB
PDBj
LinkDB
All DBs
Position
13:complement(52842889..52848640)
Genome browser
AA seq
1070 aa
AA seq
DB search
MSPVRRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQAPQCVLAFDVVSFSQEQFRLVH
VEVEVRDVNDHAPRFPRAQIPVEVSEGAAVGTRIPLEVPVDEDVGANGLQTVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFAFGARTPPEARRLFRLD
PRSGRLTLAGPVDYERQDTYELDVRAQDRGPGPRAATCKVIVRIRDVNDNAPDIAITPLA
APGAPATSPFAAAAAAAALGGADASSPAGAGTPEAGATSLVPEGAARESLVALVSTSDRD
SGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLRTV
RPYTVRVGDENDNAPLFTRPVYEVSVRENNPPGAYLATVAARDRDLGRNGQVTYRLLEAE
VGRAGGAVSTYVSVDPATGAIYALRSFDYETLRQLDVRIQASDGGSPQLSSSALVQVRVL
DQNDHAPVLVHPAPANGSLEVAVPGRTAKDTVVARVQARDADEGANGELAFELQQQEPRE
AFAIGRRTGEILLTGDLSQEPPGRVFRALLVISDGGRPPLTTTATVSFVVTAGGGRGPAA
PASAGSPERSRPPGSRLGVSGSVLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKE
VRKGGALREERPGAAGGGASAPGSPEEAARGAGPRPNMFDVLTFPGTGKAPFGSPAADAP
PPAVAAAEVPGSEGGSATGESACHFEGQQRLRGAHAEPYGASPGFGKEPAPPVAVWKGHS
FNTISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGH
SDRCWSPSCSGPNAHPSPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEK
VLHRDYDRTVTLLSPPRPGRLPDLQEIGVPLYQSPPGRYLSPKKGANENV
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctgtgaggcgttggggcagcccctgccttttccccttgcagctcttcagcctc
tgctgggtgctctcagtggcccagagcaaaacagtccgatacagcaccttcgaggaggat
gcccccggcacggtcatcgggaccctggccgaggacctgcatatgaaagtatcgggtgac
acaagcttccgcctgatgaagcaattcaacagctctctgctccgggtgcgcgaaggcgac
gggcagctgaccgtcggggacgccggcctggaccgcgagcggctgtgtggccaggccccg
cagtgcgtgctggccttcgatgtggtcagcttctcgcaggagcagttccggctggtgcac
gtggaggtagaggtgagggacgtcaacgaccacgcgccgcgcttccccagggcccagatc
ccggtagaggtgtccgagggtgcggcagtgggcacgcgcatccccttggaggtgccggtg
gacgaggacgtgggcgccaacgggctgcagaccgtgcgcctggccgagccgcacagcccc
tttcgcgtggagctgcagacgcgagcggacggcgctcagtgcgcagacctggtgctgctg
caggagctggaccgcgagagccaggccgcctacagcctggagctggtggcccaggacggc
ggccgcccgccgcgctccgccacggctgccctcagcgtgcgcgtcctggatgcgaatgac
cacagcccggccttcccgcagggcgccgtggccgaagtggagctggcggaagacgcgccc
gtgggctccctgcttctcgacctggacgcagccgaccccgacgagggacctaacggcgac
gtggtgttcgcatttggcgcccgcaccccgccggaggcgcgccgcctctttcggcttgac
ccgcgatcaggccgcctcaccctggccgggcccgtggactacgagcgtcaggacacctac
gagctggacgtgcgggcgcaggaccgcggacccgggccccgcgctgccacctgcaaggtc
atcgtgcgcatccgagacgtcaatgacaacgcacccgacatcgccatcaccccgctggcc
gccccaggcgcgccggcaacctcacccttcgccgctgccgccgccgccgctgcactcggg
ggagcggacgctagctcgccggcgggagccgggacgccggaggctggtgccacttcgctg
gtgccggagggggcggcgcgcgagagcctggtggccctggtcagcacctcggacagggac
tcgggcgccaacgggcaagtgcgctgcgccctctatgggcacgagcacttccggctgcag
ccggcctacgcgggcagctacctggtggtgaccgcggcgtcgctggaccgcgaacgcatc
gccgagtacaacttgacgctggtggccgaggatcgcggcgcgcccccgctgcgcacagtg
cggccctacacggtgcgtgtgggcgacgagaacgacaacgcgccgctcttcacgcggccg
gtctatgaggtgtcggtgcgcgagaacaacccgccaggcgcctacctggccacggtggcc
gcccgcgaccgggacctgggccgcaacggccaggtcacctaccggctgctggaggccgag
gtgggccgcgccgggggcgccgtgtccacttatgtctcggtggacccagctaccggagcc
atctacgcgctgcgcagcttcgactatgagacgctgcgccaactcgacgttcgcatccaa
gctagcgacggcggctcccctcagctttccagcagcgccctagtgcaagtgcgcgtgctg
gaccagaacgaccatgcgccagtcctggtgcacccggcgccagccaatggctccctagaa
gtggcggtgcctgggcgcaccgcaaaggacacggttgtggcccgtgtgcaggcccgggat
gcagacgagggagccaacggggagctggcgttcgagctgcagcagcaggagccgcgcgaa
gccttcgccatcggccgccgcacgggggagatactgctcaccggcgacctctcgcaggag
ccacccggtcgcgtgttcagggcgctcctggtcatatccgacggcggccgtcccccgctc
accaccaccgcaactgtcagcttcgtggtaacagcagggggcgggcgtgggccggctgcg
cctgccagtgcaggaagcccggagcgttcccgcccgcctggctctcggctcggggtgtcc
gggtcggtgctgcaatgggacacgccgctgatcgtcatcatcgtgctggccgggagctgc
acgctgctgctggccgccatcatcgccatcgccaccacctgcaaccgccgcaagaaggag
gtgcgcaaagggggggccctccgggaagagcggcccggggcggcgggcggcggagcctcg
gctcccggctccccggaggaggccgcccggggagccgggcccaggcccaacatgttcgac
gtgctcaccttccctggcaccggcaaagcgccctttggcagccccgcggcggacgcgcct
ccgcctgcggtcgccgcggccgaagtgccgggctcagagggcggcagcgccactggggaa
agcgcctgtcacttcgaggggcagcagcggctccgcggcgcgcacgccgagccctacggt
gcctccccgggttttggaaaggagccggcgccccctgtggcggtgtggaaaggacactcc
ttcaacaccatttctggcagagaagcagagaagttcagcggcaaagacagcggtaaaggg
gacagtgatttcaacgacagcgattccgacatcagcggggacgctctgaaaaaggatctc
atcaaccacatgcagagtggactgtgggcgtgcaccgctgagtgtaagatcctgggccac
tctgaccgctgctggagcccatcctgcagcgggcccaacgcacatccatcgcctcaccca
ccagcccagatgtcaaccttctgtaagagcacgtcactgcctcgggatcctctgcgcagg
gacaattactaccaggcccagctgcccaagacagtggggctgcagagcgtctatgagaaa
gtactgcacagagactatgacaggacagtcactctgctctcccctccccgtccagggagg
ctcccagacctgcaggagattggagtacccctctaccagtcccctcctggcaggtacctg
tccccgaagaagggagccaatgaaaatgtgtaa
Homo sapiens (human): 57575
Help
Entry
57575 CDS
T01001
Symbol
PCDH10, OL-PCDH, PCDH19
Name
(RefSeq) protocadherin-10 isoform 1 precursor
KO
K28836
protocadherin-10, delta 2
Organism
hsa
Homo sapiens (human)
Pathway
hsa04519
Cadherin signaling
Network
nt06549
Cadherin signaling
Element
N02003
deltaPCDH8/10/18/20 to Wnt signaling
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
57575 (PCDH10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsa04515
]
57575 (PCDH10)
Cell adhesion molecules [BR:
hsa04515
]
Cadherins
Protocadherins
57575 (PCDH10)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
TMEM98_N
GP38
Motif
Other DBs
NCBI-GeneID:
57575
NCBI-ProteinID:
NP_116586
OMIM:
608286
HGNC:
13404
Ensembl:
ENSP00000264360.4
UniProt:
Q9P2E7
X5D999
Q9NSR3
Structure
PDB
PDBj
LinkDB
All DBs
Position
4:133149294..133208606
Genome browser
AA seq
1040 aa
AA seq
DB search
MIVLLLFALLWMVEGVFSQLHYTVQEEQEHGTFVGNIAEDLGLDITKLSARGFQTVPNSR
TPYLDLNLETGVLYVNEKIDREQICKQSPSCVLHLEVFLENPLELFQVEIEVLDINDNPP
SFPEPDLTVEISESATPGTRFPLESAFDPDVGTNSLRDYEITPNSYFSLDVQTQGDGNRF
AELVLEKPLDREQQAVHRYVLTAVDGGGGGGVGEGGGGGGGAGLPPQQQRTGTALLTIRV
LDSNDNVPAFDQPVYTVSLPENSPPGTLVIQLNATDPDEGQNGEVVYSFSSHISPRAREL
FGLSPRTGRLEVSGELDYEESPVYQVYVQAKDLGPNAVPAHCKVLVRVLDANDNAPEISF
STVKEAVSEGAAPGTVVALFSVTDRDSEENGQVQCELLGDVPFRLKSSFKNYYTIVTEAP
LDREAGDSYTLTVVARDRGEPALSTSKSIQVQVSDVNDNAPRFSQPVYDVYVTENNVPGA
YIYAVSATDRDEGANAQLAYSILECQIQGMSVFTYVSINSENGYLYALRSFDYEQLKDFS
FQVEARDAGSPQALAGNATVNILIVDQNDNAPAIVAPLPGRNGTPAREVLPRSAEPGYLL
TRVAAVDADDGENARLTYSIVRGNEMNLFRMDWRTGELRTARRVPAKRDPQRPYELVIEV
RDHGQPPLSSTATLVVQLVDGAVEPQGGGGSGGGGSGEHQRPSRSGGGETSLDLTLILII
ALGSVSFIFLLAMIVLAVRCQKEKKLNIYTCLASDCCLCCCCCGGGGSTCCGRQARARKK
KLSKSDIMLVQSSNVPSNPAQVPIEESGGFGSHHHNQNYCYQVCLTPESAKTDLMFLKPC
SPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSNETKHQRAELSYLVDRPRRVNSSAF
QEADIVSSKDSGHGDSEQGDSDHDATNRAQSAGMDLFSNCTEECKALGHSDRCWMPSFVP
SDGRQAADYRSNLHVPGMDSVPDTEVFETPEAQPGAERSFSTFGKEKALHSTLERKELDG
LLTNTRAPYKPPYLTRKRIC
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgctattattgtttgccttgctctggatggtggaaggagtcttttcccagctt
cactacacggtacaggaggagcaggaacatggcactttcgtggggaatatcgctgaagat
ctgggtctggacattacaaaactttcggctcgcgggtttcagacggtgcccaactcaagg
accccttacttagacctcaacctggagacaggggtgctgtacgtgaacgagaaaatagac
cgcgaacaaatctgcaaacagagcccctcctgtgtcctgcacctggaggtctttctggag
aaccccctggagctgttccaggtggagatcgaggtgctggacattaatgacaaccccccc
tctttcccggagccagacctgacggtggaaatctctgagagcgccacgccaggcactcgc
ttccccttggagagcgcattcgacccagacgtgggcaccaactccttgcgcgactacgag
atcacccccaacagctacttctccctggacgtgcagacccagggggatggcaaccgattc
gctgagctggtgctggagaagccactggaccgagagcagcaagcggtgcaccgctacgtg
ctgaccgcggtggacggaggaggtgggggaggagtaggagaaggagggggaggtggcggg
ggagcaggcctgcccccccagcagcagcgcaccggcacggccctactcaccatccgagtg
ctggactccaatgacaatgtgcccgctttcgaccaacccgtctacactgtgtccctacca
gagaactctcccccaggcactctcgtgatccagctcaacgccaccgacccggacgagggc
cagaacggtgaggtcgtgtactccttcagcagccacatttcgccccgggcgcgggagctt
ttcggactctcgccgcgcactggcagactggaggtaagcggcgagttggactatgaagag
agcccagtgtaccaagtgtacgtgcaagccaaggacctgggccccaacgccgtgcctgcg
cactgcaaggtgctagtgcgagtactggatgctaatgacaacgcgccagagatcagcttc
agcaccgtgaaggaagcggtgagtgagggcgcggcgcccggcactgtggtggcccttttc
agcgtgactgaccgcgactcagaggagaatgggcaggtgcagtgcgagctactgggagac
gtgcctttccgcctcaagtcttcctttaagaattactacaccatcgttaccgaagccccc
ctggaccgagaggcgggggactcctacaccctgactgtagtggctcgggaccggggcgag
cctgcgctctccaccagtaagtcgatccaggtacaagtgtcggatgtgaacgacaacgcg
ccgcgtttcagccagccggtctacgacgtgtatgtgactgaaaacaacgtgcctggcgcc
tacatctacgcggtgagcgccaccgaccgggatgagggcgccaacgcccagcttgcctac
tctatcctcgagtgccagatccagggcatgagcgtcttcacctacgtttctatcaactct
gagaacggctacttgtacgccctgcgctccttcgactatgagcagctgaaggacttcagt
tttcaggtggaagcccgggacgctggcagcccccaggcgctggctggtaacgccactgtc
aacatcctcatagtggatcaaaatgacaacgcccctgccatcgtggcgcctctaccaggg
cgcaacgggactccagcgcgtgaggtgctgccccgctcggcggagccgggttacctgctc
acccgcgtggccgccgtggacgcggacgacggcgagaacgcccggctcacttacagcatc
gtgcgtggcaacgaaatgaacctctttcgcatggactggcgcaccggggagctgcgcaca
gcacgccgagtcccggccaagcgcgacccccagcggccttatgagctggtgatcgaggtg
cgcgaccatgggcagccgcccctttcctccaccgccaccctggtggttcagctggtggat
ggcgccgtggagccccagggcgggggcgggagcggaggcggagggtcaggagagcaccag
cgccccagtcgctctggcggcggggaaacctcgctagacctcaccctcatcctcatcatc
gcgttgggctcggtgtccttcatcttcctgctggccatgatcgtgctggccgtgcgttgc
caaaaagagaagaagctcaacatctatacttgtctggccagcgattgctgcctctgctgc
tgctgctgcggtggcggaggttcgacctgctgtggccgccaagcccgggcgcgcaagaag
aaactcagcaagtcagacatcatgctggtgcagagctccaatgtacccagtaacccggcc
caggtgccgatagaggagtccgggggctttggctcccaccaccacaaccagaattactgc
tatcaggtatgcctgacccctgagtccgccaagaccgacctgatgtttcttaagccctgc
agcccttcgcggagtacggacactgagcacaacccctgcggggccatcgtcaccggttac
accgaccagcagcctgatatcatctccaacggaagcattttgtccaacgagactaaacac
cagcgagcagagctcagctatctagttgacagacctcgccgagttaacagttctgcattc
caggaagccgacatagtaagctctaaggacagtggtcatggagacagtgaacagggagat
agtgatcatgatgccaccaaccgtgcccagtcagctggtatggatctcttctccaattgc
actgaggaatgtaaagctctgggccactcagatcggtgctggatgccttcttttgtccct
tctgatggacgccaggctgctgattatcgcagcaatctgcatgttcctggcatggactct
gttccagacactgaggtgtttgaaactccagaagcccagcctggggcagagcggtccttt
tccacctttggcaaagagaaggcccttcacagcactctggagaggaaggagctggatgga
ctgctgactaatacgcgagcgccttacaaaccaccatatttgacacggaaaaggatatgc
tag
Homo sapiens (human): 54510
Help
Entry
54510 CDS
T01001
Symbol
PCDH18, PCDH68L
Name
(RefSeq) protocadherin-18 isoform 1 precursor
KO
K16499
protocadherin 12/17/18, delta 2
Organism
hsa
Homo sapiens (human)
Pathway
hsa04519
Cadherin signaling
Network
nt06549
Cadherin signaling
Element
N02003
deltaPCDH8/10/18/20 to Wnt signaling
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
54510 (PCDH18)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsa04515
]
54510 (PCDH18)
Cell adhesion molecules [BR:
hsa04515
]
Cadherins
Protocadherins
54510 (PCDH18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Ig_CLSTN
Cadherin_FAT4_N
BBS1
TMEM154
Ig_BT4661_3rd
PAH
ATG31
MPS-4
Cadherin_C_2
Syndecan
DUF3418
Motif
Other DBs
NCBI-GeneID:
54510
NCBI-ProteinID:
NP_061908
OMIM:
608287
HGNC:
14268
Ensembl:
ENSP00000355082.4
UniProt:
Q9HCL0
Q5HYG2
Structure
PDB
PDBj
LinkDB
All DBs
Position
4:complement(137518918..137532494)
Genome browser
AA seq
1135 aa
AA seq
DB search
MHQMNAKMHFRFVFALLIVSFNHDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLLKLPN
PSTVRFRAMQRGNSPLLVVNEDNGEISIGATIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIMETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEININLMS
PGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFVISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEITIPKGAESGFHV
TRIRAIDRDSGVNAELSCAIVAGNEENIFIIDPRSCDIHTNVSMDSVPYTEWELSVIIQD
KGNPQLHTKVLLKCMIFEYAESVTSTAMTSVSQASLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPTQPQQ
QHPHQSLEDDAQPADSGEKKKSFSTFGKDSPNDEDTGDTSTSSLLSEMSSVFQRLLPPSL
DTYSECSEVDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTTNCGPPLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaatgaatgctaaaatgcactttaggtttgtttttgcacttctgatagtatct
ttcaaccacgatgtactgggcaagaatttgaaatacaggatttatgaggaacagagggtt
ggatcagtaattgcaagactatcagaggatgtggctgatgttttattgaagcttcctaat
ccttctactgttcgatttcgagccatgcagaggggaaattctcctctacttgtagtaaac
gaggataatggggaaatcagcataggggctacaattgaccgtgaacaactgtgccagaaa
aacttgaactgttccatagagtttgatgtgatcactctacccacagagcatctgcagctt
ttccatattgaagttgaagtgctggatattaatgacaattctccccagttttcaagatct
ctcatacctattgagatatctgagagtgcagcagttgggactcgcattcccctggacagt
gcatttgatccagatgttggggaaaattccctccacacatactcgctctctgccaatgat
ttttttaatatcgaggttcggaccaggactgatggagccaagtatgcagaactcatagtg
gtcagagagttagatcgggagctgaagtcaagctacgagcttcagctcactgcctcagac
atgggagtacctcagaggtctggctcatccatactaaaaataagcatttcagactccaat
gacaacagccctgcttttgagcagcaatcttatataatacaactcttagaaaactccccg
gttggcactttgctcttagatctgaatgccacggatccagatgagggcgctaatgggaaa
attgtatattccttcagcagtcatgtgtctcccaaaattatggagacttttaaaattgat
tctgaaagaggacatttgactcttttcaagcaagtggattatgaaatcaccaaatcctat
gagattgatgttcaggctcaagatttgggtccaaattcaatcccagcccattgcaaaatt
ataattaaggttgtggatgttaatgacaataaacctgaaattaacatcaacctcatgtcc
cctggaaaagaagaaatatcttatatttttgaaggggatcctattgatacatttgttgct
ttggtcagagttcaggacaaggattctgggctgaatggagaaatagtttgtaagcttcat
ggacatggtcactttaaacttcagaagacatatgaaaacaattatttaatcttaactaat
gccacactggatagagaaaagagatctgagtatagtttgactgtaatcgctgaggacagg
gggacacccagtctctctacagtgaaacattttacagttcaaatcaatgatatcaatgac
aatccaccccacttccagagaagccgatatgaatttgtaatttcagaaaataactcacca
ggggcatatatcaccactgttacagccacagatcctgatcttggagaaaatgggcaagtg
acatacaccatcttggagagttttattctaggaagttccataactacatatgtaaccatt
gacccatctaatggagccatctatgccctcagaatctttgatcatgaagaagtgagtcag
atcacttttgtggtagaagcaagagatggaggaagcccgaagcaactggtaagcaatacc
acagttgtgctcaccatcattgacgaaaatgacaacgttcctgtggttatagggcctgca
ttgcgtaataatacggcagaaatcaccattcccaaaggggctgaaagtggctttcatgtc
acaagaataagggcaattgacagagactctggtgtgaatgctgaactcagctgcgccata
gtagcaggtaatgaggagaatatcttcataattgatccacgatcatgtgacatccatacc
aacgttagcatggattctgttccctacacagaatgggagctgtcagttatcattcaggac
aaaggcaatcctcagctacataccaaagtccttctgaagtgcatgatctttgaatatgca
gagtcggtgacaagtacagcaatgacttcagtaagccaggcatccttggatgtctccatg
ataataattatttccttaggagcaatttgtgcagtgttgctggttattatggtgctattt
gcaactaggtgtaaccgcgagaagaaagacactagatcctataactgcagggtggccgaa
tcaacttaccagcaccacccaaaaaggccatcccggcagattcacaaaggggacatcaca
ttggtgcctaccataaatggcactctgcccatcagatctcatcacagatcgtctccatct
tcatctcctaccttagaaagagggcagatgggcagccggcagagtcacaacagtcaccag
tcactcaacagtttggtgacaatctcatcaaaccacgtgccagagaatttctcattagaa
ctcacccacgccactcctgctgttgagcaggtctctcagcttctttcaatgcttcaccag
gggcaatatcagccaagaccaagttttcgaggaaacaaatattccaggagctacagatat
gcccttcaagacatggacaaatttagcttgaaagacagtggccgtggtgacagtgaggca
ggagacagtgattatgatttggggcgagattctccaatagataggctgttgggtgaagga
ttcagcgacctgtttctcacagatggaagaattccagcagctatgagactctgcacggag
gagtgcagggtcctgggacactctgaccagtgctggatgccaccactgccctcaccgtct
tctgattataggagtaacatgttcattccaggggaagaattcccaacgcaaccccagcag
cagcatccacatcagagtcttgaggatgacgctcagcctgcagattccggtgaaaagaag
aagagtttttccacctttggaaaggactccccaaacgatgaggacactggggataccagc
acatcatctctgctctcggaaatgagcagtgtgttccagcgtctcttaccgccttccctg
gacacctattctgaatgcagtgaggtggatcggtccaactccctggagcgcaggaaggga
cccttgccagccaaaactgtgggttacccacagggggtagcggcatgggcagccagtacg
cattttcaaaatcccaccaccaactgtgggccgccacttggaactcactccagtgtgcag
ccttcttcaaaatggctgccagccatggaggagatccctgaaaattatgaggaagatgat
tttgacaatgtgctcaaccacctcaatgatgggaaacacgaactcatggatgccagtgaa
ctggtggcagagattaacaaactgcttcaagatgtccgccagagctag
Homo sapiens (human): 64881
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Entry
64881 CDS
T01001
Symbol
PCDH20, PCDH13
Name
(RefSeq) protocadherin-20 precursor
KO
K16498
protocadherin delta 1
Organism
hsa
Homo sapiens (human)
Pathway
hsa03273
Virion - Lassa virus and SFTS virus
hsa04519
Cadherin signaling
Network
nt06549
Cadherin signaling
Element
N02002
delta1PCDH to PP1alpha signaling
N02003
deltaPCDH8/10/18/20 to Wnt signaling
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
64881 (PCDH20)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
64881 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hsa01009
]
64881 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsa04515
]
64881 (PCDH20)
Protein phosphatases and associated proteins [BR:
hsa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
64881 (PCDH20)
Cell adhesion molecules [BR:
hsa04515
]
Cadherins
Protocadherins
64881 (PCDH20)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_2
Cadherin_CELSR2_9th
Ig_Cad99C_N
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
64881
NCBI-ProteinID:
NP_073754
OMIM:
614449
HGNC:
14257
Ensembl:
ENSP00000387250.3
UniProt:
Q8N6Y1
B3KSZ7
LinkDB
All DBs
Position
13:complement(61409685..61415849)
Genome browser
AA seq
951 aa
AA seq
DB search
MRGRGNARSSQALGVSWCPATWHPRLDMGRLHRPRSSTSYRNLPHLFLFFLFVGPFSCLG
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLLPRSAGRPDPQSQLPERTGAEWNPPLSFS
LASRGLSGQYVTLDNRSGELHTSAQEIDREALCVEGGGGTAWSGSVSISSSPSDSCLLLL
DVLVLPQEYFRFVKVKIAIRDINDNAPQFPVSQISVWVPENAPVNTRLAIEHPAVDPDVG
INGVQTYRLLDYHGMFTLDVEENENGERTPYLIVMGALDRETQDQYVSIIIAEDGGSPPL
LGSATLTIGISDINDNCPLFTDSQINVTVYGNATVGTPIAAVQAVDKDLGTNAQITYSYS
QKVPQASKDLFHLDENTGVIKLFSKIGGSVLESHKLTILANGPGCIPAVITALVSIIKVI
FRPPEIVPRYIANEIDGVVYLKELEPVNTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSPY
KPYNNEYLLETTKPMDYELQQFYEVAVVAWNSEGFHVKRVIKVQLLDDNDNAPIFLQPLI
ELTIEENNSPNAFLTKLYATDADSEERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDRE
EKEKYRYTVRAVDCGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIGV
ISVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGEP
ALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAVI
AYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMVN
LFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKVESVSCMPTLVALSVISLGS
ITLVTGMGIYICLRKGEKHPREDENLEVQIPLKGKIDLHMRERKPMDISNI
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgagggaatgcgcgcagctcacaggccctgggagtgagctggtgcccggcg
acctggcacccgcgcctggatatggggcgtctacatcgtcccaggagcagcaccagctac
aggaacctgccgcatctgtttctgtttttcctcttcgtgggacccttcagctgcctcggg
agttacagccgggccaccgagcttctgtacagcctaaacgagggactacccgcgggggtg
ctcatcggcagcctggccgaggacctgcggctgctgcccaggtctgcagggaggccggac
ccgcagtcgcagctgccagagcgcaccggtgctgagtggaacccccctctctccttcagc
ctggcctcccggggactgagtggccagtacgtgaccctagacaaccgctctggggagctg
cacacttcagctcaggagatcgacagggaggccctgtgtgttgaagggggtggagggact
gcgtggagcggcagcgtttccatctcctcctctccttctgactcttgtcttttgctgctg
gatgtgcttgtcctgcctcaggaatacttcaggtttgtgaaggtgaagatcgccatcaga
gacatcaatgacaacgccccgcagttccctgtttcccagatctcggtgtgggtcccggaa
aatgcacctgtaaacacccgactggccatagagcatcctgctgtggacccagatgtaggc
attaatggggtacagacctatcgcttactggactaccatggtatgttcaccctggacgtg
gaggagaatgagaatggggagcgcaccccctacctaattgtcatgggtgctttggacagg
gaaacccaggaccagtatgtgagcatcatcatagctgaggatggtgggtctccaccactt
ttgggcagtgccactctcaccattggcatcagtgacattaatgacaattgccctctcttc
acagactcacaaatcaatgtcactgtgtatgggaatgctacagtgggcaccccaattgca
gctgtccaggctgtggataaagacttggggaccaatgctcaaattacttattcttacagt
cagaaagttccacaagcatctaaggatttatttcacctggatgaaaacactggagtcatt
aaacttttcagtaagattggaggaagtgttctggagtcccacaagctcaccatccttgct
aatggaccaggctgcatccctgctgtaatcactgctcttgtgtccattattaaagttatt
ttcagaccccctgaaattgtccctcgttacatagcaaacgagatagatggtgtggtttat
ctgaaagaactggaacccgttaacactcccattgcgtttttcaccataagagatccagaa
ggtaaatacaaggttaactgctacctggatggtgaagggccgtttaggttatcaccttac
aaaccatacaataatgaatatttactagagaccacaaaacctatggactatgagctacag
cagttctatgaagtagctgtggtggcttggaactctgagggatttcatgtcaaaagggtc
attaaagtgcaacttttagatgacaatgataatgctccaattttccttcaacccttaata
gaactaaccatcgaagagaacaactcacccaatgcctttttgactaagctgtatgctaca
gatgccgacagcgaggagagaggccaagtttcatattttctgggacctgatgctccatca
tatttttccttagacagtgtcacaggaattctgacagtttctactcagctggaccgagaa
gagaaagaaaagtacagatacactgtcagagctgttgactgtgggaagccacccagagaa
tcagtagccactgtggccctcacagtgttggataaaaatgacaacagtcctcggtttatc
aacaaggacttcagcttttttgtgcctgaaaactttccaggctatggtgagattggagta
attagtgtaacagatgctgacgctggacgaaatggatgggtcgccctctctgtggtgaac
cagagtgatatttttgtcatagatacaggaaagggtatgctgagggctaaagtctctttg
gacagagagcagcaaagctcctatactttgtgggttgaagctgttgatgggggtgagcct
gccctctcctctacagcaaaaatcacaattctccttctagatatcaatgacaaccctcct
cttgttttgtttcctcagtctaatatgtcttatctgttagtactgccttctactctgcca
ggctccccggttacagaagtctatgctgtcgacaaagacacaggcatgaatgctgtcata
gcttacagcatcatagggagaagaggtcctaggcctgagtccttcaggattgaccctaaa
actggcaacattactttggaagaggcattgctgcagacagattatgggctccatcgctta
ctggtgaaagtgagtgatcatggttatcccgagcctctccactccacagtcatggtgaac
ctatttgtcaatgacactgtcagtaatgagagttacattgagagtcttttaagaaaagaa
ccagagattaatatagaggagaaagaaccacaaatctcaatagaaccgactcataggaag
gtagaatctgtgtcttgtatgcccaccttagtagctctgtctgtaataagcttgggttcc
atcacactggtcacagggatgggcatatacatctgtttaaggaaaggggaaaagcatccc
agggaagatgaaaatttggaagtacagattccactgaaaggaaaaattgacttgcatatg
cgagagagaaagccaatggatatttctaatatttga
DBGET
integrated database retrieval system