Homo sapiens (human): 55610
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Entry
55610 CDS
T01001
Symbol
VPS50, CCDC132, NEDMSC, VPS54L
Name
(RefSeq) VPS50 subunit of EARP/GARPII complex
KO
K23288
syndetin
Organism
hsa
Homo sapiens (human)
Disease
H02461
Neurodevelopmental disorder with microcephaly
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsa04131
]
55610 (VPS50)
Membrane trafficking [BR:
hsa04131
]
Protein recycling
Others
EARP complex
55610 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
55610
NCBI-ProteinID:
NP_060137
OMIM:
616465
HGNC:
25956
Ensembl:
ENSG00000004766
UniProt:
Q96JG6
LinkDB
All DBs
Position
7:93232366..93361123
Genome browser
AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLKSPQESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSVDSFDIVKYELEKLPPVLNLQELEAYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTASASEG
SNMIGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQPVSTSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDGPVKSVSRETLKSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSG
DTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAGKALDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDID
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctctcatgacccgacagggtctgaaaagccctcaagaaagcctc
agtgatcttggtgccatagagagtctccgggtccctggaaaggaagaattcagggaactt
cgagaacagccaagtgaccctcaagctgaacaagagcttattaatagtattgaacaagta
tatttttctgtggattcatttgatattgttaaatatgagctggagaagcttccacctgtt
ctcaatttgcaagaattagaggcgtatagagacaaattgaaacaacagcaagctgcagta
tctaaaaaagtggcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattgcagacaggtcttcaattagctgctgttatctgtacaaatgggaga
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaacagatgtacggttaagtgaaatgctggaggaggaagattatccaggagctatt
cagttgtgccttgaatgtcaaaaagctgccagcacttttaaacattacagttgtataagt
gaactgaattcaaagctgcaagatactttggaacagattgaggaacagctggacgtagct
ctttccaaaatctgcaagaattttgacattaaccattataccaaggttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcatatgcacttcacccaagcc
attcacaacaccgtgtttcaagttgttcttggttatgtggaactatgtgcaggaaacaca
gacacaaaattccaaaagctgcaatataaggatctctgtacacatgttacaccagacagc
tatattccatgccttgcagacctgtgcaaagcactatgggaagttatgctcagctattat
aggactatggaatggcatgaaaagcatgacaatgaggatactgcttcagcttctgaaggg
agtaatatgataggtactgaagaaactaattttgatcgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgttcagctaaaagtaaaaacctacttgctt
ggaactgatttgtctatattcaaatatgatgatttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttacaggaatct
attagaaaacaaagtgtcaattatttcaagaattaccatagaacacggctcgatgaactg
agaatgttcttagagaatgagacttgggaactttgtcctgttaagtcaaatttcagcatc
ttgcaacttcatgaatttaaattcatggaacagtctcgctccccatcagtttcacctagt
aaacagccagtctcaacttcttcaaaaacagtgaccttgtttgagcagtactgtagtggt
gggaatccatttgaaattcaggccaaccacaaagatgaagaaacagaagatgtcttagct
tctaatgggtatgaatctgatgaacaagaaaagagtgcctatcaagagtatgacagtgac
agtgatgttcctgaggaactcaaacgagactatgtggatgagcagacaggagatggtcct
gtgaaaagtgtttctcgggaaactctaaaaagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacctatcttaacaaatacaacattgaacgtcataagacttgttggaaaa
tatatgcagatgatgaacattcttaagccaattgcctttgatgttattcatttcatgtct
caactatttgattattacttgtatgcaatatataccttttttggtcggaatgattcattg
gaatcaactggactcggccttagtagtagtagactaagaacaactctaaacagaatacaa
gaaagccttattgatctagaagtttcagctgatcctactgccacactcacagcagcagaa
gaaagaaaggagaaggtgccaagtccacacctcagtcacctagtggttttgacatctggg
gatacgctgtatgggttggcagaaagagtggtagccacggaatccttggtattcttggct
gaacagtttgagttccttcagccacatctggatgctgtgatgcctgcagtcaaaaagccc
tttcttcagcagttctattctcagacagtctcaaccgccagtgaactacggaaaccaatt
tactggattgtagctggtaaagcccttgattatgaacagatgctgcttctcatggctaat
gtgaaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatgcactatta
aaggaatttgagcagtttaacaggaggctaaatgaagtttctaagagagttcgcataccc
ttgcctgtgtctaatatactttgggaacattgtatacgattggctaatcgaactattgta
gaaggatatgccaatgtcaagaaatgcagtaatgagggtcgtgccctgatgcaattggat
tttcaacagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaa
gaatttgtagaaacttatattaaagcttattacctaactgagaatgacatggaacggtgg
atcaaagagcacagggaatattcaacgaagcagctgaccaatctggtgaatgtttgcctg
ggatcccatatcaataagaaagcaagacaaaaacttctagcagctatagatgatatagac
agacctaaaagataa
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