Homo sapiens (human): 55660
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Entry
55660 CDS
T01001
Symbol
PRPF40A, FBP-11, FBP11, FLAF1, FNBP3, HIP-10, HIP10, HYPA, NY-REN-6, Prp40
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform 2
KO
K12821
pre-mRNA-processing factor 40
Organism
hsa
Homo sapiens (human)
Pathway
hsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
55660 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsa03041
]
55660 (PRPF40A)
Spliceosome [BR:
hsa03041
]
Complex A
U1 snRNP components
U1 related factors
55660 (PRPF40A)
Complex B
55660 (PRPF40A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
FF_RHG35_4th
CEP164_N
WW_2
Motif
Other DBs
NCBI-GeneID:
55660
NCBI-ProteinID:
NP_001341360
OMIM:
612941
HGNC:
16463
LinkDB
All DBs
Position
2:complement(152651732..152718019)
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AA seq
912 aa
AA seq
DB search
MCSGSGRRRSSLSPTMRPGTGAERGGLMMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQ
MMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNSMDVAAGTASGAKSMWT
EHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKES
RWAKPKELEDLEAMIKAEESSKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAA
AAAAAAAAANANASTSASNTVSGTVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTST
PAIQDQSVEVSSNTGEETSKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLK
EKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKE
SFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQ
LRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHI
RALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIR
FTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISS
TKRSTTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQAAPPIELDA
VWEDIRERFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKR
SRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDS
PESDAEREKDKKEKDRESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKR
RRTLLEQLDDDQ
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgtgtagcggcagtggccgccggcggagcagtctgagcccgacgatgaggccggggacg
ggagctgagcgtggaggcctcatgatggggcaccctggcatgcattatgccccaatggga
atgcaccctatgggtcagagagcgaatatgcctcctgtacctcatggaatgatgccgcag
atgatgccccctatgggagggccaccaatgggacaaatgcctggaatgatgtcgtcagta
atgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcctgccttaccgcca
ggagtaaatagtatggatgtagcagcaggtacagcatctggtgcaaaatcaatgtggact
gaacataaatcacctgatggaaggacttactactacaacactgaaaccaaacagtctacc
tgggagaaaccagatgatcttaaaacacctgctgagcaactcttatctaaatgcccctgg
aaggaatacaaatcagattctggaaagccttactattataattctcaaacaaaagaatct
cgctgggccaaacctaaagaacttgaggatcttgaagcaatgatcaaagctgaagaaagc
agtaagcaagaagagtgcaccacaacatcaacagccccagtccctacaacagaaattccg
accacaatgagcaccatggctgctgccgaagcagcagctgctgttgttgcagcagcagca
gcggcagcagcagcagcagctgcagccaatgctaatgcttccacttctgcttctaatact
gtcagtggaactgttccagttgttcctgagcctgaagttacttccattgttgctactgtt
gtagataatgagaatacagtaactatttcaactgaggaacaagcacaacttactagtacc
cctgctattcaggatcaaagtgtggaagtatccagtaatactggagaagaaacatctaag
caagaaactgtagctgattttactcccaaaaaagaagaggaggagagccaaccagcaaag
aaaacatacacttggaatacaaaggaagaggcaaagcaagcttttaaagaattattgaaa
gaaaagcgggtaccatcgaatgcttcatgggagcaggctatgaaaatgattattaatgat
ccacgatacagtgctttggcaaagttaagtgaaaaaaagcaagcctttaatgcctataaa
gtccagacagaaaaagaagaaaaagaagaagcaagatcaaagtacaaagaggctaaggaa
tcctttcagcgttttcttgaaaatcatgagaaaatgacttctacaaccagatacaaaaaa
gcagagcaaatgtttggagagatggaagtttggaatgcaatatcagaacgtgatcgtctt
gaaatctatgaagatgttttgttctttctttcaaaaaaagaaaaggaacaagcaaagcag
ttgcgaaagagaaattgggaagccttaaaaaacatacttgacaacatggctaatgtaaca
tactctaccacttggtctgaagcccagcagtatctgatggataatccaacttttgcagaa
gatgaggagttacaaaatatggacaaagaagatgcattaatttgctttgaagaacacatt
cgggctttagaaaaggaggaagaagaagaaaaacagaagagtttgctgagagaaaggaga
cgacagcgaaaaaatagggaatctttccagatatttttagatgaattacatgaacatgga
caactgcattctatgtcatcttggatggaattgtatccaactattagttctgatattaga
ttcactaatatgcttggtcagcctggatcaactgcacttgatcttttcaagttttatgtt
gaggatcttaaagcacgttatcatgacgagaagaagataataaaagacattctaaaggat
aaaggatttgtagttgaagtaaacactacttttgaagattttgtggcgataatcagttca
actaaaagatcaactacattagatgctggaaatatcaaattggctttcaatagtttacta
gaaaaggcagaagcccgtgaacgtgaaagagaaaaagaagaggctcggaagatgaaacga
aaagaatctgcatttaagagtatgttaaaacaagctgctcctccgatagaattggatgct
gtctgggaagatatccgtgagagatttgtaaaagagccagcatttgaggacataactcta
gaatctgaaagaaaacgaatatttaaagattttatgcatgtgcttgagcatgaatgtcag
catcatcattcaaagaacaagaaacattctaagaaatctaaaaaacatcataggaaacgt
tcccgctctcgatcggggtcagattcagatgatgatgatagccattcaaagaaaaaaaga
cagcgatcagagtctcgttctgcttcagaacattcttctagtgcagagtctgagagaagt
tataaaaagtcaaaaaagcataagaagaaaagtaagaagaggagacataaatctgactct
ccagaatccgatgctgagcgagagaaggataaaaaagaaaaagatcgggaaagtgaaaaa
gacagaactagacaaagatcagaatcaaaacacaaatcgcctaagaaaaagactggaaag
gattctggtaattgggatacttctggcagcgaactgagtgaaggggaattggaaaagcgc
agaagaacccttttggagcaactggatgatgatcaataa
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