Homo sapiens (human): 56006
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Entry
56006 CDS
T01001
Symbol
SMG9, C19orf61, F17127_1, HBMS, NEDITPO
Name
(RefSeq) SMG9 nonsense mediated mRNA decay factor
KO
K18735
protein SMG9
Organism
hsa
Homo sapiens (human)
Disease
H02364
Heart and brain malformation syndrome
H02535
Neurodevelopmental disorder with dysmorphic facies
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
56006 (SMG9)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
56006 (SMG9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
AAA_30
DUF6079
Motif
Other DBs
NCBI-GeneID:
56006
NCBI-ProteinID:
NP_061981
OMIM:
613176
HGNC:
25763
Ensembl:
ENSG00000105771
UniProt:
Q9H0W8
Structure
PDB
PDBj
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All DBs
Position
19:complement(43727983..43754962)
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AA seq
520 aa
AA seq
DB search
MSESGHSQPGLYGIERRRRWKEPGSGGPQNLSGPGGRERDYIAPWERERRDASEETSTSV
MQKTPIILSKPPAERSKQPPPPTAPAAPPAPAPLEKPIVLMKPREEGKGPVAVTGASTPE
GTAPPPPAAPAPPKGEKEGQRPTQPVYQIQNRGMGTAAPAAMDPVVGQAKLLPPERMKHS
IKLVDDQMNWCDSAIEYLLDQTDVLVVGVLGLQGTGKSMVMSLLSANTPEEDQRTYVFRA
QSAEMKERGGNQTSGIDFFITQERIVFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYV
EMQSLQIAAFLFTVCHVVIVVQDWFTDLSLYRFLQTAEMVKPSTPSPSHESSSSSGSDEG
TEYYPHLVFLQNKARREDFCPRKLRQMHLMIDQLMAHSHLRYKGTLSMLQCNVFPGLPPD
FLDSEVNLFLVPFMDSEAESENPPRAGPGSSPLFSLLPGYRGHPSFQSLVSKLRSQVMSM
ARPQLSHTILTEKNWFHYAARIWDGVRKSSALAEYSRLLA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagtctggacacagtcagcctggactctatgggatagagcggcggcgacggtgg
aaggagcctggctctggtggcccccagaatctctctgggcctggtggtcgggagagggac
tacattgcaccatgggaaagagagagaagggatgccagcgaagagacaagcacttccgtc
atgcagaaaacccccatcatcctctcaaaacctccagcagagcggtcaaaacagccacca
cctccaacagcccctgctgccccgcctgctccagcccctctggagaagcccatcgttctc
atgaagccacgggaggaggggaaggggcctgtggccgtgacaggtgcctctacccctgag
ggcaccgccccaccaccccctgcagcccctgcgccacccaagggggagaaggaggggcag
agacccacacagcctgtgtaccagatccagaaccggggcatgggcactgccgcaccagca
gccatggaccctgtcgtgggtcaggccaaactactgcccccagagcgcatgaagcacagc
atcaagttggtggatgaccagatgaattggtgtgacagtgccatcgagtacctgttggat
cagactgatgtgttggtggttggtgtcctgggcctccaggggacaggcaagtccatggtc
atgtcattgttgtcagccaacactccagaggaggaccagaggacttatgttttccgggcc
cagagcgctgaaatgaaggaacgagggggcaaccagaccagtggcatcgacttctttatt
acccaagaacggattgttttcctggacacacagcccatcctgagcccttctatcctagac
catctcatcaataatgaccgcaaactgcctccagagtacaaccttccccacacttacgtt
gaaatgcagtcactccagattgctgccttccttttcacggtctgccatgtggtgattgtt
gtccaggactggttcacagacctcagtctctacaggttcctgcagacagcagagatggtg
aagccctccaccccatcccccagccacgagtccagcagctcatcgggctccgatgaaggc
accgagtactacccccacctagtcttcttgcagaacaaagctcgccgagaggacttctgt
cctcggaagctgcggcagatgcacctgatgattgaccagctcatggcccactcccacctg
cgttacaagggaactctgtccatgttacaatgcaatgtcttcccggggcttccacctgac
ttcctggactctgaggtcaacttattcctggtacccttcatggacagtgaagcagagagt
gaaaacccaccaagagcaggacctggttccagcccactcttctccctgctgcctgggtat
cgtggccaccccagtttccagtccttggtgagcaagctccggagccaagtgatgtccatg
gcccggccacagctgtcacacacgatcctcaccgagaagaactggttccactacgctgcc
cggatctgggatggggtgagaaagtcctctgctctggcagagtacagccgcctgctggcc
tga
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