Homo sapiens (human): 56135
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Entry
56135 CDS
T01001
Symbol
PCDHAC1, PCDH-ALPHA-C1
Name
(RefSeq) protocadherin alpha subfamily C, 1
KO
K16493
protocadherin alpha
Organism
hsa
Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsa03036
]
56135 (PCDHAC1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hsa04515
]
56135 (PCDHAC1)
Chromosome and associated proteins [BR:
hsa03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
56135 (PCDHAC1)
Cell adhesion molecules [BR:
hsa04515
]
Cadherins
Protocadherins
56135 (PCDHAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_tail
Cadherin
Cadherin_2
Cadherin_C_2
DUF5527
Motif
Other DBs
NCBI-GeneID:
56135
NCBI-ProteinID:
NP_061721
OMIM:
606320
HGNC:
8676
Ensembl:
ENSG00000248383
UniProt:
Q9H158
LinkDB
All DBs
Position
5:140926299..141012347
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AA seq
963 aa
AA seq
DB search
MVGCGVAVLCLWVSCGAAAGQLEYSVPEETERGVAVGNLSADLRLPAAAMSSRNFRFLSS
HRELYFGVDLPSGNLVVREPADREQLCRAKAACVLTYDLVLEDPLELHKIRIHVLDTNDN
SPLFPAGDVQLHIPEFLTPGARFTLPNAQDDDEGSNGILSYSLSPSQHFRLDMGSRVDGS
EYPELVLEKALDREQRATHLLVLTARDGGLPARSGDAQVTIIVVDTNDNAPVFERSVYRT
KVPETAPNGTVLFRVQALDPDEGSNGEVQYSLSNSTQAELRHRFHVHPKSGEVQVAASLG
PPETLLEAYIEARDEGVFGLASTAKLLVEVTDVNDHAPELDFLTLSNPVPEDAAPGTVIA
LFSVKDEDLDSNGRVICGMSSAGPFQLTASFDNYYSLLIDGPLDREQISEYQVLITASDS
GSPPLSTRRTITVSVADVNDNTPNFPQPQQELFVAENNGPGASLGRVFAQDPDLGKNGLV
SYELLDVISEGPSASSLLAVESSSGAITAKTSFDFEQLRGFHFQVEGRDGGIPPRSATVT
INLFVVDRNDNYPVILFPLPRNGSVPVEIVPRSARTGHLVTKVVAEDADSGSNAWLSYHI
SRASDSSLFRISANIGELRTARLVLPTDAVKQRVVVVVRDHGDPPLSSSVTLGVLLSNSV
PQLLPDFEDVWEPGGQLSAQNLYLVIALACISFLFLGCLLFFVCTKLHQSPGCCAQSCCR
STEDLRYGSKMVSNPCMTSATIDVTTVERLSQTYLYRASLGLGSDNNSLLLRGEYNAADL
RNLATGVGLNLPISCIQIRNRKGDHANVNAMPRQPNPDWRYSASLRAGMHSSVHLEEAGI
LRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDK
FIIPGSPAIISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDN
SDQ
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggtgggctgtggggtggcagttttatgtttgtgggtttcctgcggcgctgcagcggga
cagctcgagtactcagtgccggaggagacggagcggggcgtagccgtaggcaatctctcc
gcggacttgaggctgccagcggccgctatgtcctcgcggaactttcgcttcctttccagc
caccgcgagctctacttcggggtggatctacccagcggcaatttggtggtcagagagccg
gcggaccgcgaacagctgtgcagggccaaagctgcctgcgtcttgacctacgacctggtg
ctcgaggacccgctggagctgcacaagattcggattcacgtcctggacaccaatgacaac
tcacctctctttcctgccggcgacgtgcagctgcacatccccgagttcctgacgcccgga
gcccgctttactctcccgaatgcccaagatgacgacgagggaagcaatgggatactaagc
tacagcctaagccccagtcagcactttcgcctggacatgggatcgcgggttgacggcagc
gaatacccggagttggtgttggagaaagcactggatcgcgaacagcgcgccacccacctg
ctggtgcttacagctcgggacggcgggctacctgcccgctcaggagacgcacaagtcacc
atcattgtggtggacacaaatgacaacgcgcctgtatttgagcgctccgtataccgcacc
aaggttccagagactgcacccaatgggactgtgttattccgagttcaagccttggatcca
gatgaagggtccaatggggaagtccagtactccctaagcaacagcacgcaagcagagctg
cgacaccgctttcacgtgcaccctaaaagtggggaggtgcaagtagctgcttcactaggt
ccgcctgaaacgctcttggaggcatacattgaggcgagggacgaaggtgtctttggttta
gctagcaccgctaaactgctggtggaggtgactgacgtgaacgatcatgcccccgaactg
gacttcctgactctttcgaacccagtacctgaggacgctgcccctggcacagtgattgct
ctctttagtgtaaaggatgaagacctcgattctaatggtagggtcatttgtggcatgtct
agtgcaggcccttttcagctgacggcttcctttgacaactactacagcctgctgattgat
gggcccctggaccgggagcagatcagtgaataccaagtcctgatcacggcctcagatagt
ggctcacccccacttagcacccgaaggacaatcactgtgtcagttgctgatgtgaatgac
aatacaccaaactttcctcaaccccagcaggaacttttcgttgctgaaaacaatggccct
ggggcctctctaggccgagtgtttgcccaggaccccgacctggggaagaatggccttgtc
tcttatgagctgttggatgttatctctgaagggccatcagcctctagcttgctggcagtg
gaatcatccagtggggccatcactgccaaaacttcctttgactttgagcagctcaggggg
tttcatttccaagtagaaggccgggatggtggcattcctcccagaagtgcaacagtgact
ataaacttgtttgtggtagataggaatgacaattatccggttatcttgtttcccttgccc
agaaatggttctgtcccagtggaaattgtgccccgctctgccaggactggacacttggtc
acaaaagtggtagcagaggatgctgacagtggttctaatgcctggctttcctaccacatc
tcccgggcgtctgactctagtctctttagaatttcagccaatataggtgagctccgtact
gctcgcttagttcttcccactgatgcagttaagcagagggtggtggtagtggttcgggac
catggagacccaccactttcctcctctgtcactctgggtgtgctgttgagcaactctgtc
cctcagttacttccagactttgaagatgtctgggaaccaggagggcagctttctgcccag
aacttgtatttagtaattgccttggcttgtatttcctttttatttctggggtgcttactt
ttcttcgtgtgtaccaagttgcaccagagcccaggctgttgcgctcagagctgctgtcgc
tctacagaggatctgaggtatggaagtaagatggtttcaaatccttgcatgacatcagcc
accatagatgtcactacagttgagagactttctcagacttatctctatcgggcctctctg
ggacttggttctgataataacagtttgctgttgcgtggggagtacaatgctgccgacctg
cgaaatcttgccactggggtaggactgaatttgccaatatcctgtattcagattcggaat
aggaaaggggatcacgctaatgtcaatgccatgccacgacagcccaaccctgactggcgt
tactctgcctccctgagagcaggcatgcacagctctgtgcacctagaggaggctggcatt
ctacgggctggtccaggagggcctgatcagcagtggccaacagtatccagtgcaacacca
gaaccagaggcaggagaagtgtcccctccagtcggtgcgggtgtcaacagcaacagctgg
acctttaaatacggaccaggcaaccccaaacaatccggtcccggtgagttgcccgacaaa
ttcattatcccaggatctcctgcaatcatctccatccggcaggagcctactaacagccaa
attgacaaaagtgacttcataaccttcggcaaaaaggaggagaccaagaaaaagaagaaa
aagaagaagggtaacaagacccaggagaaaaaagagaaagggaacagcacgactgacaac
agtgaccagtga
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