Homo sapiens (human): 56261
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Entry
56261 CDS
T01001
Symbol
GPCPD1, EDI3, GDE5, GDPD6, PREI4
Name
(RefSeq) glycerophosphocholine phosphodiesterase 1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
hsa
Homo sapiens (human)
Pathway
hsa00564
Glycerophospholipid metabolism
hsa05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
56261 (GPCPD1)
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
56261 (GPCPD1)
Enzymes [BR:
hsa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
56261 (GPCPD1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GDPD
C2_GDE1
CBM_20
PI-PLC-X
Motif
Other DBs
NCBI-GeneID:
56261
NCBI-ProteinID:
NP_062539
OMIM:
614124
HGNC:
26957
Ensembl:
ENSG00000125772
UniProt:
Q9NPB8
Structure
PDB
PDBj
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All DBs
Position
20:complement(5544439..5611006)
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AA seq
672 aa
AA seq
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MTPSQVAFEIRGTLLPGEVFAICGSCDALGNWNPQNAVALLPENDTGESMLWKATIVLSR
GVSVQYRYFKGYFLEPKTIGGPCQVIVHKWETHLQPRSITPLESEIIIDDGQFGIHNGVE
TLDSGWLTCQTEIRLRLHYSEKPPVSITKKKLKKSRFRVKLTLEGLEEDDDDRVSPTVLH
KMSNSLEISLISDNEFKCRHSQPECGYGLQPDRWTEYSIQTMEPDNLELIFDFFEEDLSE
HVVQGDALPGHVGTACLLSSTIAESGKSAGILTLPIMSRNSRKTIGKVRVDYIIIKPLPG
YSCDMKSSFSKYWKPRIPLDVGHRGAGNSTTTAQLAKVQENTIASLRNAASHGAAFVEFD
VHLSKDFVPVVYHDLTCCLTMKKKFDADPVELFEIPVKELTFDQLQLLKLTHVTALKSKD
RKESVVQEENSFSENQPFPSLKMVLESLPEDVGFNIEIKWICQQRDGMWDGNLSTYFDMN
LFLDIILKTVLENSGKRRIVFSSFDADICTMVRQKQNKYPILFLTQGKSEIYPELMDLRS
RTTPIAMSFAQFENLLGINVHTEDLLRNPSYIQEAKAKGLVIFCWGDDTNDPENRRKLKE
LGVNGLIYDRIYDWMPEQPNIFQVEQLERLKQELPELKSCLCPTVSRFVPSSLCGESDIH
VDANGIDNVENA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgacaccttctcaggttgcctttgaaataagaggaactcttttaccaggagaagttttt
gcgatatgtggaagctgtgatgctttgggaaactggaatcctcaaaatgctgtggctctt
cttccagagaatgacacaggtgaaagcatgctatggaaagcaaccattgtactcagtaga
ggagtatcagttcagtatcgctacttcaaagggtactttttagaaccaaagactatcggt
ggtccatgtcaagtgatagttcacaagtgggagactcatctacaaccacgatcaataacc
cctttagaaagcgaaattattattgacgatggacaatttggaatccacaatggtgttgaa
actctggattctggatggctgacatgtcagactgaaataagattacgtttgcattattct
gaaaaacctcctgtgtcaataaccaagaaaaaattaaaaaaatctagatttagggtgaag
ctgacactagaaggcctggaggaagatgacgatgatagggtatctcccactgtactccac
aaaatgtccaatagcttggagatatccttaataagcgacaatgagttcaagtgcaggcat
tcacagccggagtgtggttatggcttgcagcctgatcgttggacagagtacagcatacag
acgatggaaccagataacctggaactaatctttgattttttcgaagaagatctcagtgag
cacgtagttcagggtgatgcccttcctggacatgtgggtacagcttgtctcttatcatcc
accattgctgagagtggaaagagtgctggaattcttactcttcccatcatgagcagaaat
tcccggaaaacaataggcaaagtgagagttgactatataattattaagccattaccagga
tacagttgtgacatgaaatcttcattttccaagtattggaagccaagaataccattggat
gttggccatcgaggtgcaggaaactctacaacaactgcccagctggctaaagttcaagaa
aatactattgcttctttaagaaatgctgctagtcatggtgcagcctttgtagaatttgac
gtacacctttcaaaggactttgtgcccgtggtatatcatgatcttacctgttgtttgact
atgaaaaagaaatttgatgctgatccagttgaattatttgaaattccagtaaaagaatta
acatttgaccaactccagttgttaaagctcactcatgtgactgcactgaaatctaaggat
cggaaagaatctgtggttcaggaggaaaattccttttcagaaaatcagccatttccttct
cttaagatggttttagagtctttgccagaagatgtagggtttaacattgaaataaaatgg
atctgccagcaaagggatggaatgtgggatggtaacttatcaacatattttgacatgaat
ctgtttttggatataattttaaaaactgttttagaaaattctgggaagaggagaatagtg
ttttcttcatttgatgcagatatttgcacaatggttcggcaaaagcagaacaaatatccg
atactatttttaactcaaggaaaatctgagatttatcctgaactcatggacctcagatct
cggacaacccccattgcaatgagctttgcacagtttgaaaatctactggggataaatgta
catactgaagacttgctcagaaacccatcctatattcaagaggcaaaagctaagggacta
gtcatattctgctggggtgatgataccaatgatcctgaaaacagaaggaaattgaaggaa
cttggagttaatggtctaatttatgataggatatatgattggatgcctgaacaaccaaat
atattccaagtggagcaattggaacgcctgaagcaggaattgccagagcttaagagctgt
ttgtgtcccactgttagccgctttgttccctcatctttgtgtggggagtctgatatccat
gtggatgccaacggcattgataacgtggagaatgcttag
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