Homo sapiens (human): 57690
Help
Entry
57690 CDS
T01001
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat containing adaptor 6C
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
hsa
Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hsa03019
]
57690 (TNRC6C)
03036 Chromosome and associated proteins [BR:
hsa03036
]
57690 (TNRC6C)
Messenger RNA biogenesis [BR:
hsa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
57690 (TNRC6C)
Chromosome and associated proteins [BR:
hsa03036
]
Eukaryotic type
Gene silencing
piRNA pathway
57690 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA
RRM_1
RRM_occluded
DUF4718
THOC7
Motif
Other DBs
NCBI-GeneID:
57690
NCBI-ProteinID:
NP_001136112
OMIM:
610741
HGNC:
29318
Ensembl:
ENSG00000078687
UniProt:
Q9HCJ0
Structure
PDB
LinkDB
All DBs
Position
17:77957557..78108835
Genome browser
AA seq
1936 aa
AA seq
DB search
MEEKKKKKQEEKKKKEGAQKKAADQKTKVPEPTKTCSSQPQPAGTSTSTSTSTISSSNNG
KRASASGQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPTGTLTSVSPTQGAGPAGVSP
PPLPGAGTQHHPSKLQPDLSHSGLADHYENSHWGQQPTYRSEANCSWDKVIIDRTDKEAW
PSITGTETESASECTTDTDSASNCGSENSSMATGSAQGNFTGHTKKTNGNNGTNGALVQS
PSNQSALGAGGANSNGSAARVWGVATGSSSGLAHCSVSGGDGKMDTMIGDGRSQNCWGAS
NSNAGINLNLNPNANPAAWPVLGHEGTVATGNPSSICSPVSAIGQNMGNQNGNPTGTLGA
WGNLLPQESTEPQTSTSQNVSFSAQPQNLNTDGPNNTNPMNSSPNPINAMQTNGLPNWGM
AVGMGAIIPPHLQGLPGANGSSVSQVSGGSAEGISNSVWGLSPGNPATGNSNSGFSQGNG
DTVNSALSAKQNGSSSAVQKEGSGGNAWDSGPPAGPGILAWGRGSGNNGVGNIHSGAWGH
PSRSTSNGVNGEWGKPPNQHSNSDINGKGSTGWESPSVTSQNPTVQPGGEHMNSWAKAAS
SGTTASEGSSDGSGNHNEGSTGREGTGEGRRRDKGIIDQGHIQLPRNDLDPRVLSNTGWG
QTPVKQNTAWEFEESPRSERKNDNGTEAWGCAATQASNSGGKNDGSIMNSTNTSSVSGWV
NAPPAAVPANTGWGDSNNKAPSGPGVWGDSISSTAVSTAAAAKSGHAWSGAANQEDKSPT
WGEPPKPKSQHWGDGQRSNPAWSAGGGDWADSSSVLGHLGDGKKNGSGWDADSNRSGSGW
NDTTRSGNSGWGNSTNTKANPGTNWGETLKPGPQQNWASKPQDNNVSNWGGAASVKQTGT
GWIGGPVPVKQKDSSEATGWEEPSPPSIRRKMEIDDGTSAWGDPSNYNNKTVNMWDRNNP
VIQSSTTTNTTTTTTTTTSNTTHRVETPPPHQAGTQLNRSPLLGPVSSGWGEMPNVHSKT
ENSWGEPSSPSTLVDNGTAAWGKPPSSGSGWGDHPAEPPVAFGRAGAPVAASALCKPASK
SMQEGWGSGGDEMNLSTSQWEDEEGDVWNNAASQESTSSCSSWGNAPKKGLQKGMKTSGK
QDEAWIMSRLIKQLTDMGFPREPAEEALKSNNMNLDQAMSALLEKKVDVDKRGLGVTDHN
GMAAKPLGCRPPISKESSVDRPTFLDKDGGLVEEPTPSPFLPSPSLKLPLSHSALPSQAL
GGIASGLGMQNLNSSRQIPSGNLGMFGNSGAAQARTMQQPPQPPVQPLNSSQPSLRAQVP
QFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQLAYQRLQIQQQMLQA
QRNVSGSMRQQEQQVARTITNLQQQIQQHQRQLAQALLVKQPPPPPPPPHLSLHPSAGKS
AMDSFPSHPQTPGLPDLQTKEQQSSPNTFAPYPLAGLNPNMNVNSMDMTGGLSVKDPSQS
QSRLPQWTHPNSMDNLPSAASPLEQNPSKHGAIPGGLSIGPPGKSSIDDSYGRYDLIQNS
ESPASPPVAVPHSWSRAKSDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDVTPGS
VPTGPTINTTIQDVNRYLLKSGGSSPPSSQNATLPSSSAWPLSASGYSSSFSSIASAPSV
AGKLSDIKSTWSSGPTSHTQASLSHELWKVPRNSTAPTRPPPGLTNPKPSSTWGASPLGW
TSSYSSGSAWSTDTSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLITFHLNLTQGNAVV
RYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQALPPTSSWQSSSASSQP
RLSAAGSSHGLVRSDAGHWNAPCLGGKGSSELLWGGVPQYSSSLWGPPSADDSRVIGSPT
PLTTLLPGDLLSGESL
NT seq
5811 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaaggtgctcagaaa
aaggctgctgatcaaaaaaccaaagtgccagaacctactaagacctgttcaagccagccc
caacctgccggtaccagtaccagtacttccaccagcactatctcaagcagcaacaatggc
aaacgtgcatctgccagtggccagcagccagctgcatcccgttacctgcctcgtgaggtg
cctccacgcttccgccagcaagaacagaagcagctattaaagagaggccagccattgcct
acggggactctaaccagtgtgagcccaacccagggtgctgggcctgcaggggtaagccca
cctcccctacctggagccggaacacagcatcatcccagtaagctccaaccagatctcagt
catagtggattggcagatcattatgaaaattcccactggggacagcagcctacttacaga
agcgaagccaactgcagctgggataaagtgataatagataggactgacaaggaggcgtgg
ccttccatcacaggaacagagactgaatctgcctcagaatgtactacagacactgactct
gcctccaactgtggctcagagaacagtagcatggctacagggagtgcccagggcaacttc
actggacataccaagaagacaaatggcaataatggcaccaatggcgcactcgtccaaagc
ccttctaatcagagtgcccttggagcagggggagcgaacagtaatggaagtgcggccaga
gtgtggggtgtagccacaggctccagctctggcctggctcactgctctgtcagtggtggg
gatggaaaaatggacactatgattggagatgggagaagtcagaattgctggggtgcttcc
aactccaatgctggcattaatcttaaccttaatcctaatgccaacccagctgcctggcct
gtacttggacatgaaggaaccgtggcgacaggcaacccttccagtatttgcagtccagtc
agtgccataggtcaaaatatgggcaaccagaacgggaacccaacaggcactttaggtgct
tggggaaacttgctgccacaagagagcacagaaccacaaacgtccacttctcagaatgtg
tctttcagcgcacaacctcagaaccttaacactgatggaccaaataacactaaccccatg
aactcttcacccaaccctatcaatgcaatgcagacaaatggactgccaaactggggcatg
gctgttggtatgggggccatcatcccgccccacctgcaaggccttcctggtgctaatgga
tcatcagtttctcaagtcagtgggggcagtgctgaaggaataagcaattctgtgtgggga
ctgtccccaggtaaccctgccacaggaaatagcaattctgggttcagtcaggggaatgga
gacactgtgaactcagcattaagtgctaaacaaaatggatccagcagtgctgtgcaaaag
gaaggaagtggaggaaatgcttgggattcaggacctcctgctggtcctggaatactcgcc
tggggaaggggcagtggcaacaatggcgttggtaatatccattcaggagcttggggccac
cccagccgaagcacctctaacggtgtgaatggggaatggggaaagcccccaaaccagcat
tccaacagtgacatcaatgggaaaggatcaacagggtgggagagtcctagtgtcaccagc
cagaaccctaccgtacagcctggtggtgaacacatgaactcctgggccaaagcggcatct
tctggaactacagcaagtgaaggaagtagtgatggttctggcaaccacaatgaaggaagc
actgggagggaaggaacgggagaaggccgaaggcgagataaagggattatagaccaaggg
cacatccagttgccaaggaatgatcttgacccaagagttctgtctaatactggttgggga
cagactcctgtaaagcaaaacactgcctgggaatttgaagaatcccctaggtctgaaagg
aaaaatgacaatgggacagaggcctggggttgtgcagctactcaggcttcaaactcaggg
gggaagaacgatgggtccatcatgaacagtacaaatacctcttcagtatctgggtgggtc
aacgcgccacctgccgctgtgccagcaaacacaggttggggagacagcaacaacaaagcg
ccaagtggcccgggggtttggggggactcgataagctctactgctgttagtactgctgct
gctgccaagagtggccatgcttggagtggggccgcaaatcaggaggacaagtcacccacc
tggggtgagcctccaaagcccaaatcccaacactggggagatggacaaagatcaaatcca
gcctggagtgcaggagggggagattgggcagattcatcgtctgtccttggacacttgggg
gatgggaaaaaaaatggatctggatgggatgctgacagtaataggtcagggtctggttgg
aatgacaccacgagatctgggaacagtggctggggcaacagcacaaatacaaaggccaat
ccaggtacaaactggggggagactttaaaacctggcccccaacagaactgggctagcaaa
ccccaagacaacaatgtgagtaactggggaggagctgcttctgtgaaacagacaggaaca
gggtggatcggggggccggtaccggtcaaacagaaggacagcagtgaagcaactggctgg
gaagaaccctctccaccgtccattcgccgcaaaatggaaattgatgatggtacctcagct
tggggggacccaagcaactataacaataaaactgtaaacatgtgggatagaaacaacccg
gtcatccagagcagtaccacgaccaataccaccaccaccaccaccactaccacgagcaac
accacacacagggtcgagacgccgcccccgcaccaggccggtactcagctgaatcgatca
ccgttgcttggtccagtttcatcaggctggggagaaatgcctaatgttcactcaaagact
gaaaactcttggggagaaccatcctccccttctaccctggtggataatggcacagcagca
tgggggaagccacccagcagtggcagcgggtggggagatcaccctgcagagccgccggtg
gcatttggaagagctggcgcacctgttgctgcctcagccctgtgcaaaccagcttcaaaa
tctatgcaagaaggctggggcagtggtggggatgaaatgaacctcagtaccagccagtgg
gaggatgaagaaggggacgtgtggaataatgctgcttcccaagaaagcacctcctcctgc
agctcctgggggaacgcccccaaaaaaggacttcaaaagggcatgaagacgtctggcaag
caggatgaggcctggatcatgagccggctgatcaaacaactcacagacatgggcttcccg
agagagccagctgaggaggccttgaagagtaacaatatgaatcttgatcaggccatgagc
gctctgctggaaaagaaggtggacgtggacaagcgtgggctgggagtgaccgaccataat
ggaatggccgccaagcccctcggctgccgcccgccaatctccaaagagtcttccgtggac
cgccccacctttcttgacaaggatggcggcctcgtggaagagcccacgccttcaccgttc
ttgccttccccaagcctgaagctccccctttcacacagtgcactccccagtcaggccctg
ggtgggattgcctccgggctgggcatgcaaaacttgaattcttctagacagataccgagt
ggcaatctgggtatgtttggcaatagtggagcagcacaagccaggaccatgcagcagccg
ccacagccaccagtgcagcctcttaactcttcccagcccagtctccgtgctcaagtgcct
cagtttctatcccctcaggttcaagcacagcttttgcagtttgcagcaaaaaacattggt
ctcaaccctgcactattaacctcgccaattaatcctcaacatatgacgatgttgaaccag
ctctatcagctgcagctggcataccaacgtttacaaatccagcagcagatgttacaggcc
cagcgtaatgtgtccggatccatgagacaacaggagcagcaagttgcgcgcacaatcact
aatctgcagcagcagatccagcagcaccagcgccagctggcccaggccctgctcgtgaag
cagccaccaccgccaccgcccccgccgcacctgtctctgcacccctctgcaggcaaatcg
gccatggacagcttcccctcgcacccacagactcccggcctacctgacctgcagaccaaa
gagcagcagtcttcacccaacacctttgctccttaccctctcgctggactgaacccaaac
atgaatgtcaacagcatggacatgaccggtggcttgtcggtgaaggacccatcccagtcc
cagtcacgcctcccccagtggacgcaccccaactccatggataacttgcccagtgccgct
tcccccctggagcagaaccctagcaagcatggtgctatccctggaggtctaagcattggg
cctccaggtaagtcctccattgatgactcctatggccggtacgatttaatccagaacagt
gagtcaccagccagtcctcccgtagctgttccccatagctggtcacgtgccaaatctgac
agtgataaaatctcaaatggctctagcatcaactggcccccagaattccatccgggagtt
ccatggaaaggactgcagaatattgaccctgagaatgaccctgacgtcactcctggcagt
gtccccactgggcctaccatcaacaccaccatccaggatgtcaaccgctacctcctcaag
agtggagggtcctccccgccatcatctcagaatgccacgctgccttcttcgagtgcctgg
ccactcagtgcctccggctacagtagctctttcagcagcattgcatccgcacctagtgtt
gcaggtaaactgtcagacatcaaatcgacgtggtcctctggccctacctcccacacgcaa
gcctctctgtctcatgaactatggaaggtgcccagaaacagtactgcacccacgaggcca
cctccagggttaaccaatcccaagccctcctccacctggggtgccagccccctcggctgg
accagctcctactcctcgggttctgcctggagcaccgacacctcaggaagaaccagcagc
tggctcgttcttcgaaacctcactccccagattgatggttctacactgcggacattgtgt
ttgcaacatgggcctcttatcacattccacctgaatctgactcaaggcaatgctgtggtc
cggtacagctccaaggaggaggctgccaaggcccagaagtctctgcacatgtgcgtcctg
ggaaacactaccatcctggccgagttcgctggtgaagaagaagtgaatcgcttcttagcc
caaggccaggcgctgccacccacttccagctggcagtccagcagcgcgtccagccagccg
cggctcagcgcagcgggcagctcccatggcctggtacgcagcgacgctggccactggaac
gccccgtgcctgggtggcaaggggagcagtgagctgctgtggggcggggtgccccagtac
tccagcagcctgtggggcccgcccagcgccgacgacagcagggtgataggcagccccacg
ccgctaaccaccctgctgcctggggacctgctcagcggggagtccctgtag
DBGET
integrated database retrieval system
