KEGG   Homo sapiens (human): 58485
Entry
58485             CDS       T01001                                 
Symbol
TRAPPC1, BET5, MUM2
Name
(RefSeq) trafficking protein particle complex subunit 1
  KO
K20300  trafficking protein particle complex subunit 1
Organism
hsa  Homo sapiens (human)
Network
nt06180  Pathogenic Escherichia coli
  Element
N01291  TRAPPI-RAB1 signaling pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    58485 (TRAPPC1)
Membrane trafficking [BR:hsa04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    58485 (TRAPPC1)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   TRAPP complex I
    58485 (TRAPPC1)
SSDB
Motif
Pfam: Sybindin Sedlin_N
Other DBs
NCBI-GeneID: 58485
NCBI-ProteinID: NP_001160093
OMIM: 610969
HGNC: 19894
Ensembl: ENSG00000170043
UniProt: Q9Y5R8
LinkDB
Position
17:complement(7930345..7931999)
AA seq 145 aa
MTVHNLYLFDRNGVCLHYSEWHRKKQAGIPKEEEYKLMYGMLFSIRSFVSKMSPLDMKDG
FLAFQTSRYKLHYYETPTGIKVVMNTDLGVGPIRDVLHHIYSALYVELVVKNPLCPLGQT
VQSELFRSRLDSYVRSLPFFSARAG
NT seq 438 nt   +upstreamnt  +downstreamnt
atgactgtccacaacctgtacctgtttgaccggaatggagtgtgtctgcactacagcgaa
tggcaccgcaagaagcaagcagggattcccaaggaggaggagtataagctgatgtacggg
atgctcttctctatccgctcgtttgtcagcaagatgtccccgctagacatgaaggatggc
ttcctggccttccaaactagccgttacaaactccattactacgagacgcccactgggatc
aaagttgtcatgaatactgacttgggcgtgggacccatccgagatgtgctgcaccacatc
tacagtgcgctgtatgtggagctggtggtgaagaatcccctgtgcccgctgggccaaact
gtgcaaagtgagctctttcgctcccgactggactcctatgttcgctctctgcccttcttc
tccgcccgggctggctga

KEGG   Homo sapiens (human): 6399
Entry
6399              CDS       T01001                                 
Symbol
TRAPPC2, MIP2A, SEDL, SEDT, TRAPPC2P1, TRS20, ZNF547L, hYP38334
Name
(RefSeq) trafficking protein particle complex subunit 2
  KO
K20301  trafficking protein particle complex subunit 2
Organism
hsa  Homo sapiens (human)
Network
nt06180  Pathogenic Escherichia coli
  Element
N01291  TRAPPI-RAB1 signaling pathway
Disease
H00760  Spondyloepiphyseal dysplasia tarda
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    6399 (TRAPPC2)
Membrane trafficking [BR:hsa04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    6399 (TRAPPC2)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   TRAPP complex I
    6399 (TRAPPC2)
SSDB
Motif
Pfam: Sedlin_N Sybindin
Other DBs
NCBI-GeneID: 6399
NCBI-ProteinID: NP_001011658
OMIM: 300202
HGNC: 23068
Ensembl: ENSG00000196459
UniProt: P0DI81 P0DI82 Q6IBE5
LinkDB
Position
X:complement(13712245..13734620)
AA seq 140 aa
MSGSFYFVIVGHHDNPVFEMEFLPAGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMY
LKTVDKFNEWFVSAFVTAGHMRFIMLHDIRQEDGIKNFFTDVYDLYIKFSMNPFYEPNSP
IRSSAFDRKVQFLGKKHLLS
NT seq 423 nt   +upstreamnt  +downstreamnt
atgtctgggagcttctactttgtaattgttggccaccatgataatccagtttttgaaatg
gagtttttgccagctgggaaggcagaatccaaagacgaccatcgtcatctgaaccagttc
atagctcatgctgctctcgacctcgtagatgagaacatgtggctatcgaacaacatgtac
ttgaaaactgtggacaagttcaacgagtggtttgtgtcggcatttgtcactgcggggcat
atgaggtttattatgcttcatgacataagacaagaagatggaataaagaacttctttact
gatgtttatgatttatatataaagttttcaatgaatccattttatgaacccaattctcct
attcgatcaagtgcatttgacagaaaagttcagtttcttgggaagaaacaccttttaagc
tga

KEGG   Homo sapiens (human): 27095
Entry
27095             CDS       T01001                                 
Symbol
TRAPPC3, BET3
Name
(RefSeq) trafficking protein particle complex subunit 3
  KO
K20302  trafficking protein particle complex subunit 3
Organism
hsa  Homo sapiens (human)
Network
nt06180  Pathogenic Escherichia coli
  Element
N01291  TRAPPI-RAB1 signaling pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    27095 (TRAPPC3)
Membrane trafficking [BR:hsa04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    27095 (TRAPPC3)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   TRAPP complex I
    27095 (TRAPPC3)
SSDB
Motif
Pfam: TRAPP
Other DBs
NCBI-GeneID: 27095
NCBI-ProteinID: NP_055223
OMIM: 610955
HGNC: 19942
Ensembl: ENSG00000054116
UniProt: O43617
Structure
LinkDB
Position
1:complement(36136572..36156053)
AA seq 180 aa
MSRQANRGTESKKMSSELFTLTYGALVTQLCKDYENDEDVNKQLDKMGFNIGVRLIEDFL
ARSNVGRCHDFRETADVIAKVAFKMYLGITPSITNWSPAGDEFSLILENNPLVDFVELPD
NHSSLIYSNLLCGVLRGALEMVQMAVEAKFVQDTLKGDGVTEIRMRFIRRIEDNLPAGEE
NT seq 543 nt   +upstreamnt  +downstreamnt
atgtcgaggcaggcgaaccgtggcaccgagagcaagaaaatgagctctgagctcttcacc
ctgacctatggtgccctggtcacccagctatgtaaggactatgaaaatgatgaagatgtg
aataaacagctggacaaaatgggctttaacattggagtccggctgattgaagatttcttg
gctcggtcaaatgttgggaggtgccatgactttcgggaaactgcggatgtcattgccaag
gtggcgttcaagatgtacttgggcatcactccaagcattactaattggagcccagctggt
gatgaattctccctcattttggaaaataaccccttggtggactttgtggaacttcctgat
aaccactcatcccttatttattccaatctcttgtgtggggtgttgcggggagctttggag
atggtccagatggctgtggaggccaagtttgtccaggacaccctgaaaggagacggtgtg
acagaaatccggatgagattcatcaggcggattgaggacaatcttccagctggagaggaa
taa

KEGG   Homo sapiens (human): 51399
Entry
51399             CDS       T01001                                 
Symbol
TRAPPC4, CGI-104, HSPC172, NEDESBA, PTD009, SBDN, SYNBINDIN, TRS23
Name
(RefSeq) trafficking protein particle complex subunit 4
  KO
K20303  trafficking protein particle complex subunit 4
Organism
hsa  Homo sapiens (human)
Network
nt06180  Pathogenic Escherichia coli
  Element
N01291  TRAPPI-RAB1 signaling pathway
Disease
H02470  Neurodevelopmental disorder with structural brain abnormalities
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    51399 (TRAPPC4)
Membrane trafficking [BR:hsa04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    51399 (TRAPPC4)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   TRAPP complex I
    51399 (TRAPPC4)
SSDB
Motif
Pfam: Sybindin Sedlin_N PDZ_6 PDZ
Other DBs
NCBI-GeneID: 51399
NCBI-ProteinID: NP_057230
OMIM: 610971
HGNC: 19943
Ensembl: ENSG00000196655
UniProt: Q9Y296
Structure
LinkDB
Position
11:119018766..119024134
AA seq 219 aa
MAIFSVYVVNKAGGLIYQLDSYAPRAEAEKTFSYPLDLLLKLHDERVLVAFGQRDGIRVG
HAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRPRLTSNEKLMLASMFHSLFA
IGSQLSPEQGSSGIEMLETDTFKLHCYQTLTGIKFVVLADPRQAGIDSLLRKIYEIYSDF
ALKNPFYSLEMPIRCELFDQNLKLALEVAEKAGTFGPGS
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcgatttttagtgtgtatgtggtgaacaaagctggcggcttgatttaccagttggac
agctacgcgccacgggctgaggctgagaaaactttcagttatccgctggatctgctgctc
aagctacacgatgagcgtgtgttggttgctttcggccagcgggacggcatccgagtgggt
catgcagtgctggccatcaatggcatggacgtgaatggcaggtacacggccgacgggaaa
gaggtgctggagtatctgggtaaccctgctaattacccggtgtccattcgatttggccgg
ccccgcctcacttctaatgagaagcttatgctggcctccatgttccactcgctctttgcc
atcggctcccagctgtctcctgaacagggaagctcaggcattgagatgctggagacagac
acattcaaattgcactgctaccagacactgacagggatcaagtttgtggttctagcagat
cctaggcaagctggaatagattctcttctccgaaagatttatgagatttactcagacttt
gccctcaagaatccattctattccttagaaatgcctatcaggtgtgagctctttgaccag
aacctgaagctagctctggaggtggcagagaaggctggaacttttggacctgggtcatag

KEGG   Homo sapiens (human): 126003
Entry
126003            CDS       T01001                                 
Symbol
TRAPPC5, TRS31
Name
(RefSeq) trafficking protein particle complex subunit 5
  KO
K20280  trafficking protein particle complex subunit 5
Organism
hsa  Homo sapiens (human)
Network
nt06180  Pathogenic Escherichia coli
  Element
N01291  TRAPPI-RAB1 signaling pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    126003 (TRAPPC5)
Membrane trafficking [BR:hsa04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    126003 (TRAPPC5)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   TRAPP complex I
    126003 (TRAPPC5)
SSDB
Motif
Pfam: TRAPP Fibroin_P25
Other DBs
NCBI-GeneID: 126003
NCBI-ProteinID: NP_001035926
HGNC: 23067
Ensembl: ENSG00000181029
UniProt: Q8IUR0
LinkDB
Position
19:7680833..7687703
AA seq 188 aa
MEARFTRGKSALLERALARPRTEVSLSAFALLFSELVQHCQSRVFSVAELQSRLAALGRQ
VGARVLDALVAREKGARRETKVLGALLFVKGAVWKALFGKEADKLEQANDDARTFYIIER
EPLINTYISVPKENSTLNCASFTAGIVEAVLTHSGFPAKVTAHWHKGTTLMIKFEEAVIA
RDRALEGR
NT seq 567 nt   +upstreamnt  +downstreamnt
atggaggcgcgcttcacgcgcgggaagtcggcgctgctggagcgcgcgctggcgcggccg
cgcaccgaggtgagcctgagcgccttcgcactgctgttctccgagctggtacagcactgc
cagagccgcgtcttctccgtggccgagctgcagtcgcgcctggccgcgctgggccgccag
gtgggcgcgcgcgtgctggatgcgctggtggcgcgcgaaaagggtgcccggcgtgagacc
aaggtgctaggcgcgttgctcttcgtcaagggcgccgtgtggaaggcgctcttcggcaag
gaggcggacaagctggagcaggccaacgatgacgcgcgcaccttctacatcatcgagcgc
gagccgctcatcaacacctacatctccgtgcccaaggagaacagcacgctcaactgcgcc
agcttcacggcgggcatcgtggaggcggtgctcacacacagcggcttccctgccaaggtc
acggcgcactggcacaagggcaccacgctcatgatcaagttcgaggaggcagtcatcgct
cgagaccgggccctggagggccgctga

KEGG   Homo sapiens (human): 79090
Entry
79090             CDS       T01001                                 
Symbol
TRAPPC6A, TRS33
Name
(RefSeq) trafficking protein particle complex subunit 6A
  KO
K20304  trafficking protein particle complex subunit 6
Organism
hsa  Homo sapiens (human)
Network
nt06180  Pathogenic Escherichia coli
  Element
N01291  TRAPPI-RAB1 signaling pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    79090 (TRAPPC6A)
Membrane trafficking [BR:hsa04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    79090 (TRAPPC6A)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   TRAPP complex I
    79090 (TRAPPC6A)
SSDB
Motif
Pfam: TRAPP
Other DBs
NCBI-GeneID: 79090
NCBI-ProteinID: NP_001257820
OMIM: 610396
HGNC: 23069
Ensembl: ENSG00000007255
UniProt: O75865 B7TZ90
Structure
LinkDB
Position
19:complement(45162933..45178237)
AA seq 159 aa
MADTVLFEFLHTEMVAELWAHDPDPGPGGQKMSLSVLEGMGFRVGQALGERLPRETLAFR
EELDVLKFLCKDLWVAVFQKQMDSLRTNHQGTYVLQDNSFPLLLPMASGLQYLEEAPKFL
AFTCGLLRGALYTLGIESVVTASVAALPVCKFQVVIPKS
NT seq 480 nt   +upstreamnt  +downstreamnt
atggcggatactgtgttgtttgagtttcttcacacggagatggtggctgagctgtgggct
cacgaccccgaccccggcccggggggacagaagatgagcctgtcggtcctggagggtatg
gggttccgtgtgggccaggctctaggcgagaggctgccccgggagacgctggccttcagg
gaggagctggatgtcctcaagttcttgtgcaaagacctgtgggtggcggtgttccagaag
cagatggacagcctgcgcaccaatcaccaggggacctacgtcctgcaagacaacagcttc
cccctcctcctcccgatggcctctggcctgcagtatctggaggaagcacccaagttcctg
gccttcacctgcggcctcctgcgcggcgccctctataccctgggcattgagagcgtggtc
accgcctccgtggcagccctgcccgtctgtaagttccaggtggtgattccgaaatcctaa

KEGG   Homo sapiens (human): 122553
Entry
122553            CDS       T01001                                 
Symbol
TRAPPC6B, NEDMEBA, TPC6
Name
(RefSeq) trafficking protein particle complex subunit 6B
  KO
K20304  trafficking protein particle complex subunit 6
Organism
hsa  Homo sapiens (human)
Network
nt06180  Pathogenic Escherichia coli
  Element
N01291  TRAPPI-RAB1 signaling pathway
Disease
H02461  Neurodevelopmental disorder with microcephaly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    122553 (TRAPPC6B)
Membrane trafficking [BR:hsa04131]
 Endosome - Golgi transport
  Tethering complex
   TRAPP complex II
    122553 (TRAPPC6B)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   TRAPP complex I
    122553 (TRAPPC6B)
SSDB
Motif
Pfam: TRAPP
Other DBs
NCBI-GeneID: 122553
NCBI-ProteinID: NP_001073005
OMIM: 610397
HGNC: 23066
Ensembl: ENSG00000182400
UniProt: Q86SZ2
Structure
LinkDB
Position
14:complement(39147814..39170333)
AA seq 158 aa
MADEALFLLLHNEMVSGVYKSAEQGEVENGRCITKLENMGFRVGQGLIERFTKDTARFKD
ELDIMKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLTQMSAGKQYLEHASKYLA
FTCGLIRGGLSNLGIKSIVTAEVSSMPACKFQVMIQKL
NT seq 477 nt   +upstreamnt  +downstreamnt
atggcggatgaggcgttgtttttgcttctccataacgagatggtgtctggagtgtacaag
tccgcggagcagggggaggtggaaaacggacgatgtattactaagctggaaaacatgggg
tttcgagtgggacaaggattgatagaaaggtttacaaaagatactgcaaggttcaaggat
gagttagatatcatgaagttcatttgtaaagatttttggactacggtattcaagaaacaa
atcgacaatctaaggacaaatcatcagggcatctatgtacttcaggacaacaaatttcgc
ctgcttactcagatgtctgcaggaaaacagtatttagaacatgcatctaagtatttagca
tttacgtgtggcttaatcagaggtggcttatcaaacttgggaataaaaagtattgtaaca
gctgaagtgtcttcaatgcctgcttgcaaatttcaggtgatgatacagaagctgtag

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