KEGG   Homo sapiens (human): 58509
Entry
58509             CDS       T01001                                 
Symbol
CACTIN, C19orf29, NY-REN-24, fSAPc
Name
(RefSeq) cactin, spliceosome C complex subunit
  KO
K25058  cactin
Organism
hsa  Homo sapiens (human)
Network
nt06547  Spliceosome
  Element
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    58509 (CACTIN)
Spliceosome [BR:hsa03041]
 Complex C
  Other components
   Complex C specific factors
    58509 (CACTIN)
SSDB
Motif
Pfam: Cactin_mid CactinC_cactus
Other DBs
NCBI-GeneID: 58509
NCBI-ProteinID: NP_001074012
OMIM: 618536
HGNC: 29938
Ensembl: ENSG00000105298
UniProt: Q8WUQ7
Structure
LinkDB
Position
19:complement(3610645..3626790)
AA seq 758 aa
MGRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSE
EERWQRSGMRSRSPPRPKWHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSAS
PGRSQSPRAAAAALSQQQSLQERLRLREERKQQEELMKAFETPEEKRARRLAKKEAKERK
KREKMGWGEEYMGYTNTDNPFGDNNLLGTFIWNKALEKKGISHLEEKELKERNKRIQEDN
RLELQKVKQLRLEREREKAMREQELEMLQREKEAEHFKTWEEQEDNFHLQQAKLRSKIRI
RDGRAKPIDLLAKYISAEDDDLAVEMHEPYTFLNGLTVADMEDLLEDIQVYMELEQGKNA
DFWRDMTTITEDEISKLRKLEASGKGPGERREGVNASVSSDVQSVFKGKTYNQLQVIFQG
IEGKIRAGGPNLDMGYWESLLQQLRAHMARARLRERHQDVLRQKLYKLKQEQGVESEPLF
PILKQEPQSPSRSLEPEDAAPTPPGPSSEGGPAEAEVDGATPTEGDGDGDGEGEGEGEAV
LMEEDLIQQSLDDYDAGRYSPRLLTAHELPLDAHVLEPDEDLQRLQLSRQQLQVTGDASE
SAEDIFFRRAKEGMGQDEAQFSVEMPLTGKAYLWADKYRPRKPRFFNRVHTGFEWNKYNQ
THYDFDNPPPKIVQGYKFNIFYPDLIDKRSTPEYFLEACADNKDFAILRFHAGPPYEDIA
FKIVNREWEYSHRHGFRCQFANGIFQLWFHFKRYRYRR
NT seq 2277 nt   +upstreamnt  +downstreamnt
atgggtcgggacacacgctcgcgctcgcggtccgcgggtcgccggggccgaaggcggcag
agtcagagcgggagccgaagtcggagcaggagccatgggcggcgaaaccgacggcgccgg
gaggacgagggacggcgcagacggaggcggcggagccgggagcgcaggtcagattcagag
gaagagcggtggcagcgctcagggatgcgaagccggagccccccgcggcccaagtggcac
tcaagagatgggtcctctcagtcggactcaggagaggagcagtcacggggccagtgggct
cgccggcgacggcgcgcacgctcgtggtctcctagctcctcagcatccagctccgcgtct
ccagggcgatcccagagcccccgggcggccgcggctgccctgagccagcagcagagcctg
caggagcggctgcggctgcgggaggagcggaagcagcaggaggagctgatgaaggccttc
gagacgcccgaggagaagcgcgcacggcggctggccaagaaggaggccaaggagcgcaag
aagcgggagaagatgggctggggtgaggagtacatgggctacaccaacaccgacaacccc
ttcggagacaacaacctgctgggcaccttcatctggaataaggccctggagaagaagggg
atcagccacctggaggagaaggagctgaaggagcggaacaagaggatccaggaggacaac
cggctggagctgcagaaggtgaagcagctgcggctggagcgggagcgggagaaggccatg
cgcgagcaggagctggagatgctgcagcgcgagaaggaggcagagcacttcaagacatgg
gaggagcaggaggacaacttccacctccagcaggccaagctgcgttccaagatccgcatc
cgggacgggcgggccaagcccatcgacctgctggccaagtacatcagcgctgaggatgac
gatctggccgtggagatgcatgagccctacacgttcctcaacggcctcaccgtggccgac
atggaggacctgctggaggatatccaggtctacatggagctggagcagggcaagaacgcc
gacttctggcgggacatgaccaccatcaccgaggacgagatctccaagctccgcaagctg
gaggcctcgggcaaggggccaggtgagcgccgcgagggggtcaacgcctccgtcagctct
gatgtgcagtcggtgttcaaggggaagacatacaaccagctgcaggtcatcttccagggc
atcgagggcaaaatccgcgctggtggccccaacctggacatgggctactgggagagcctc
ctgcagcagcttcgtgcccacatggcacgggcccggctgcgtgagcgccaccaggacgtg
ctgcggcagaagctgtacaaactgaagcaggagcagggcgtggagagcgagccgctgttc
cccatcctcaagcaggagccccagtcccccagccgcagcctggagcctgaggacgcggcg
cccaccccgcccgggccctcctcggagggcggccccgcggaggccgaggtggacggcgcg
accccgacagagggcgacggcgacggggacggtgagggcgagggcgagggcgaggcggtg
ctcatggaggaggacctgatccagcagagcctggacgactacgacgccggcaggtacagc
ccgcggctgctcacggcgcacgagctgccactggacgcgcacgtgctggaaccggatgag
gacctgcagcgcctgcagctctcgcgccagcagctccaggtcacgggagacgccagcgag
agcgccgaggacatcttcttccggcgggccaaggagggcatgggccaggacgaggcgcag
ttcagcgtggagatgccactcaccggcaaggcctacctgtgggccgacaagtaccggcca
cgcaagccgcgcttcttcaaccgcgtgcacacgggcttcgagtggaacaagtacaaccag
acgcactacgactttgacaacccaccgcccaagatcgtgcagggatacaagttcaacatc
ttctaccccgacctcatcgacaagcgctccacgcccgagtacttcctggaggcctgcgcc
gacaacaaggatttcgccatcctgcgcttccacgcggggccgccctacgaggacatcgct
ttcaagatcgtcaaccgcgagtgggaatactcgcaccgccacggcttccgctgccagttt
gccaacggcatcttccagctgtggtttcacttcaagcgctaccgctatcggcggtga

KEGG   Homo sapiens (human): 26017
Entry
26017             CDS       T01001                                 
Symbol
FAM32A, OTAG-12, OTAG12
Name
(RefSeq) family with sequence similarity 32 member A
  KO
K13120  protein FAM32A
Organism
hsa  Homo sapiens (human)
Network
nt06547  Spliceosome
  Element
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    26017 (FAM32A)
Spliceosome [BR:hsa03041]
 Complex C
  Other components
   Complex C specific factors
    26017 (FAM32A)
SSDB
Motif
Pfam: FAM32A UPF0172 HSP70
Other DBs
NCBI-GeneID: 26017
NCBI-ProteinID: NP_054796
OMIM: 614554
HGNC: 24563
Ensembl: ENSG00000105058
UniProt: Q9Y421
Structure
LinkDB
Position
19:16185410..16192046
AA seq 112 aa
MEAYEQVQKGPLKLKGVAELGVTKRKKKKKDKDKAKLLEAMGTSKKNEEEKRRGLDKRTP
AQAAFEKMQEKRQMERILKKASKTHKQRVEDFNRHLDTLTEHYDIPKVSWTK
NT seq 339 nt   +upstreamnt  +downstreamnt
atggaggcctacgagcaggtccaaaagggacccctgaagctgaaaggcgtcgcagagctg
ggagtgaccaagcggaagaagaaaaagaaggacaaagacaaagcgaaactcctggaagca
atgggaacgagcaaaaagaacgaggaggagaagcggcgcggcctggacaagcggaccccg
gcccaggcggccttcgagaaaatgcaggagaagcggcaaatggaaaggatcctaaagaag
gcatccaaaacccacaagcagagagtggaggacttcaacagacacctggacacactcacg
gagcattacgacattcccaaagtcagctggacgaagtag

KEGG   Homo sapiens (human): 163859
Entry
163859            CDS       T01001                                 
Symbol
SDE2, C1orf55, dJ671D7.1
Name
(RefSeq) spliceosome associated SDE2
  KO
K25059  replication stress response regulator SDE2
Organism
hsa  Homo sapiens (human)
Network
nt06547  Spliceosome
  Element
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    163859 (SDE2)
   03032 DNA replication proteins [BR:hsa03032]
    163859 (SDE2)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    163859 (SDE2)
Spliceosome [BR:hsa03041]
 Complex C
  Other components
   Complex C specific factors
    163859 (SDE2)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    163859 (SDE2)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    163859 (SDE2)
SSDB
Motif
Pfam: Sde2_N_Ubi_vert SDE2 SDE2_2C
Other DBs
NCBI-GeneID: 163859
NCBI-ProteinID: NP_689821
OMIM: 620743
HGNC: 26643
Ensembl: ENSG00000143751
UniProt: Q6IQ49
Structure
LinkDB
Position
1:complement(225982702..225999343)
AA seq 451 aa
MAEAAALVWIRGPGFGCKAVRCASGRCTVRDFIHRHCQDQNVPVENFFVKCNGALINTSD
TVQHGAVYSLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAE
WVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAASS
KMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPS
TSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAE
LGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPE
ERENVAVAKLQESQPGNAVIDKETIDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQ
ERAARLFSVRGLAKEQIDPALFAKPLKGKKK
NT seq 1356 nt   +upstreamnt  +downstreamnt
atggcggaggccgcggcgctggtgtggattcgcggccctggcttcgggtgcaaggcggtg
cggtgtgcctcgggtcggtgcaccgtccgggattttatccaccggcactgccaagatcag
aatgttccagtggaaaacttctttgtgaaatgcaatggagcactcattaacaccagtgac
acagtgcagcatggagctgtttatagtttggaacccagactttgcggtggaaaaggaggt
tttggatctatgctccgagcacttggtgctcagattgagaagacaaccaatcgagaagct
tgtcgggatctcagtggaaggagactacgcgatgtcaatcatgaaaaagcaatggctgaa
tgggtaaaacaacaagccgagcgagaggctgaaaaggagcagaagcggctggagcgactg
cagcggaagcttgtagaacccaagcactgcttcaccagccccgactaccagcagcagtgc
catgagatggctgagcgtctggaggattccgtcctcaaaggtatgcaggctgcctccagc
aagatggtttcagcagaaatcagtgagaatcggaaacggcaatggcctactaaatctcaa
acagacagaggagccagtgcgggaaagaggagatgcttctggttgggcatggagggacta
gagactgcagaagggtccaactctgagagttcagatgatgacagtgaagaagcaccaagc
acttcaggaatgggtttccatgctccaaaaattggtagcaatggtgtcgagatggcagcc
aaatttcccagtggttctcagagggcgagagtagtgaatacagaccatggatcaccagaa
caactgcagatcccggtgactgactctgggaggcatattttagaagactcatgtgctgag
ctgggggagtccaaagagcacatggaaagcaggatggttacagaaacagaagagacccag
gagaagaaggcagagagtaaagaacccatagaagaggagcccactggggctggactgaat
aaggataaagagacagaagaaaggactgatggggaaagagttgctgaggtagcacctgaa
gaaagggaaaacgttgccgttgccaaactgcaggaaagccagccaggaaacgcagttatt
gataaggaaactatagatttattggcgttcacctctgttgcagaactggagttgctgggt
ttggagaagctcaaatgtgaactgatggcccttggactgaaatgtgggggcactctgcag
gagcgggcagcaagactcttctctgtcagaggactggcaaaggagcaaattgacccggct
ttatttgccaagcctttgaaagggaagaaaaaatga

KEGG   Homo sapiens (human): 79576
Entry
79576             CDS       T01001                                 
Symbol
NKAP, MRXSHD
Name
(RefSeq) NFKB activating protein
  KO
K25931  NF-kappa-B-activating protein
Organism
hsa  Homo sapiens (human)
Network
nt06547  Spliceosome
  Element
N01993  Spliceosome catalysis (exon ligation)
N01994  Spliceosome disassembly
Disease
H00658  X-linked syndromic intellectual developmental disorder
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    79576 (NKAP)
Spliceosome [BR:hsa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    79576 (NKAP)
SSDB
Motif
Pfam: Nkap_C NKAP SR-25
Other DBs
NCBI-GeneID: 79576
NCBI-ProteinID: NP_078804
OMIM: 300766
HGNC: 29873
Ensembl: ENSG00000101882
UniProt: Q8N5F7
Structure
LinkDB
Position
X:complement(119920672..119943751)
AA seq 415 aa
MAPVSGSRSPDREASGSGGRRRSSSKSPKPSKSARSPRGRRSRSHSCSRSGDRNGLTHQL
GGLSQGSRNQSYRSRSRSRSRERPSAPRGIPFASASSSVYYGSYSRPYGSDKPWPSLLDK
EREESLRQKRLSERERIGELGAPEVWGLSPKNPEPDSDEHTPVEDEEPKKSTTSASTSEE
EKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDSETDSSDEDNKRRAKKAKKKEK
KKKHRSKKYKKKRSKKSRKESSDSSSKESQEEFLENPWKDRTKAEEPSDLIGPEAPKTLT
SQDDKPLNYGHALLPGEGAAMAEYVKAGKRIPRRGEIGLTSEEIASFECSGYVMSGSRHR
RMEAVRLRKENQIYSADEKRALASFNQEERRKRENKILASFREMVYRKTKGKDDK
NT seq 1248 nt   +upstreamnt  +downstreamnt
atggctccggtgtccggctcacgcagcccggatagggaggcctcgggctcggggggaaga
cgtcgcagttcgtcgaagagtccgaagcccagcaaatctgcccgctccccgcggggccgc
cgctctcgctcgcactcttgctctcggtccggggaccggaatggactcacccatcagctg
ggtggcctcagccaaggctcccgaaaccagtcctaccgctcacgctcgcggtcgcgttct
agagagcggccctctgcgccccggggcatccccttcgcttctgcctcctcgtcagtctat
tacggcagctactcgcgcccctacgggagcgacaagccttggcctagcctcctcgacaag
gagagggaggagagcctgcggcagaagagattaagtgagagagagagaattggagaattg
ggagctcctgaagtatggggactttctccaaagaatcctgaaccagattctgatgaacat
acaccagtggaggatgaagagccaaagaaaagcactacttcagcttctacttcagaagaa
gaaaaaaagaagaagtctagccgttcaaaagaaaggtccaagaaaaggagaaagaaaaaa
tcatcgaaaagaaaacataagaagtattctgaagatagcgacagtgactctgattctgaa
acagactccagtgatgaagataacaaaaggagagcaaagaaagccaagaaaaaggaaaag
aagaagaaacacagatcgaagaaatataagaaaaagaggtctaagaagagcagaaaagag
tccagtgattcaagctctaaagaatcccaagaagagtttctggaaaatccctggaaggat
cgaacaaaggctgaagaaccatcagatttaattggcccagaggctccaaaaacacttacc
tctcaagatgataaacctttgaactatggccatgctctgttacctggtgaaggtgcagct
atggctgaatatgtaaaagctggaaaacgtatcccacgaagaggtgaaattggcttgaca
agtgaagaaattgcatcatttgaatgctcaggttatgtaatgagtggtagcaggcatcgc
cgaatggaggctgtgcgactgcgaaaagagaaccagatctacagtgctgatgagaagaga
gcccttgcatcctttaaccaagaagagagacgaaagagagagaacaagattctggccagt
tttcgagaaatggtttacagaaagaccaaagggaaggatgacaaataa

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