Entry |
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Symbol |
SFPQ, POMP100, PPP1R140, PSF
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Name |
(RefSeq) splicing factor proline and glutamine rich
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KO |
K13219 | splicing factor, proline- and glutamine-rich |
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Organism |
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Brite |
KEGG Orthology (KO) [BR:hsa00001]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:hsa01009]
6421 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:hsa03021]
6421 (SFPQ)
03041 Spliceosome [BR:hsa03041]
6421 (SFPQ)
Protein phosphatases and associated proteins [BR:hsa01009]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
6421 (SFPQ)
Transcription machinery [BR:hsa03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
6421 (SFPQ)
Spliceosome [BR:hsa03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
6421 (SFPQ)
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SSDB |
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Motif |
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Other DBs |
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Structure |
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LinkDB |
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Position |
1:complement(35176380..35193145)
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AA seq |
707 aa
MSRDRFRSRGGGGGGFHRRGGGGGRGGLHDFRSPPPGMGLNQNRGPMGPGPGQSGPKPPI
PPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQPPPPPQDSSKPVVAQGPGPAPG
VGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQ
AGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLSTPGGHPKPPHRGGGE
PRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKANLSLLRRPGEKTYTQRCRLF
VGNLPADITEDEFKRLFAKYGEPGEVFINKGKGFGFIKLESRALAEIAKAELDDTPMRGR
QLRVRFATHAAALSVRNLSPYVSNELLEEAFSQFGPIERAVVIVDDRGRSTGKGIVEFAS
KPAARKAFERCSEGVFLLTTTPRPVIVEPLEQLDDEDGLPEKLAQKNPMYQKERETPPRF
AQHGTFEYEYSQRWKSLDEMEKQQREQVEKNMKDAKDKLESEMEDAYHEHQANLLRQDLM
RRQEELRRMEELHNQEMQKRKEMQLRQEEERRRREEEMMIRQREMEEQMRRQREESYSRM
GYMDPRERDMRMGGGGAMNMGDPYGSGGQKFPPLGGGGGIGYEANPGVPPATMSGSMMGS
DMRTERFGQGGAGPVGGQGPRGMGPGTPAGYGRGREEYEGPNKKPRF |
NT seq |
2124 nt +upstreamnt +downstreamnt
atgtctcgggatcggttccggagtcgtggcggtggcggtggtggcttccacaggcgtgga
ggaggcggcggccgcggcggcctccacgacttccgttctccgccgcccggcatgggcctc
aatcagaatcgcggccccatgggtcctggcccgggccagagcggccctaagcctccgatc
ccgccaccgcctccacaccaacagcagcaacagccaccaccgcagcagccaccgccgcag
cagccgccaccgcatcagccgccgccgcatccacagccgcatcagcagcagcagccgccg
ccaccgccgcaggactcttccaagcccgtcgttgctcagggacccggccccgctcccgga
gtaggcagcgcaccaccagcctccagctcggccccgcccgccactccaccaacctcgggg
gccccgccagggtccgggccaggcccgactccgaccccgccgcctgcagtcacctcggcc
cctcccggggcgccgccacccaccccgccaagcagcggggtccctaccacacctcctcag
gccggaggcccgccgcctccgcccgcggcagtcccgggcccgggtccagggcctaagcag
ggcccaggtccgggtggtcccaaaggcggcaaaatgcctggcgggccgaagccaggtggc
ggcccgggcctaagtacgcctggcggccaccccaagccgccgcatcgaggcggcggggag
ccccgcgggggccgccagcaccacccgccctaccaccagcagcatcaccaggggcccccg
cccggcgggcccggcggccgcagcgaggagaagatctcggactcggaggggtttaaagcc
aatttgtctctcttgaggaggcctggagagaaaacttacacacagcgatgtcggttgttt
gttgggaatctacctgctgatatcacggaggatgaattcaaaagactatttgctaaatat
ggagaaccaggagaagtttttatcaacaaaggcaaaggattcggatttattaagcttgaa
tctagagctttggctgaaattgccaaagccgaactggatgatacacccatgagaggtaga
cagcttcgagttcgctttgccacacatgctgctgccctttctgttcgtaatctttcacct
tatgtttccaatgaactgttggaagaagcctttagccaatttggtcctattgaaagggct
gttgtaatagtggatgatcgtggaagatctacagggaaaggcattgttgaatttgcttct
aagccagcagcaagaaaggcatttgaacgatgcagtgaaggtgttttcttactgacgaca
actcctcgtccagtcattgtggaaccacttgaacaactagatgatgaagatggtcttcct
gaaaaacttgcccagaagaatccaatgtatcaaaaggagagagaaacccctcctcgtttt
gcccagcatggcacgtttgagtacgaatattctcagcgatggaagtctttggatgaaatg
gaaaaacagcaaagggaacaagttgaaaaaaacatgaaagatgcaaaagacaaattggaa
agtgaaatggaagatgcctatcatgaacatcaggcaaatcttttgcgccaagatctgatg
agacgacaggaagaattaagacgcatggaagaacttcacaatcaagaaatgcagaaacgt
aaagaaatgcaattgaggcaagaggaggaacgacgtagaagagaggaagagatgatgatt
cgtcaacgtgagatggaagaacaaatgaggcgccaaagagaggaaagttacagccgaatg
ggctacatggatccacgggaaagagacatgcgaatgggtggcggaggagcaatgaacatg
ggagatccctatggttcaggaggccagaaatttccacctctaggaggtggtggtggcata
ggttatgaagctaatcctggcgttccaccagcaaccatgagtggttccatgatgggaagt
gacatgcgtactgagcgctttgggcagggaggtgcggggcctgtgggtggacagggtcct
agaggaatggggcctggaactccagcaggatatggtagagggagagaagagtacgaaggc
ccaaacaaaaaaccccgattttag |