Homo sapiens (human): 64848
Help
Entry
64848 CDS
T01001
Symbol
YTHDC2, CAHL, hYTHDC2
Name
(RefSeq) YTH N6-methyladenosine RNA binding protein C2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
hsa
Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsa03041
]
64848 (YTHDC2)
Enzymes [BR:
hsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
64848 (YTHDC2)
Spliceosome [BR:
hsa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
64848 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
HA2_C
OB_NTP_bind
Helicase_C
R3H
RNA_hel_CTD
DEAD
WHD_HA2
Ank_2
AAA_19
nSTAND3
AAA_22
Ank
ATPase
PhoH
AAA_7
UvrD-helicase
nSTAND_NTPase5
AAA_16
AAA_29
T2SSE
SRP54
ABC_tran
Motif
Other DBs
NCBI-GeneID:
64848
NCBI-ProteinID:
NP_073739
OMIM:
616530
HGNC:
24721
Ensembl:
ENSG00000047188
UniProt:
Q9H6S0
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:113513694..113595284
Genome browser
AA seq
1430 aa
AA seq
DB search
MSRPSSVSPRQPAPGGGGGGGPSPCGPGGGGRAKGLKDIRIDEEVKIAVNIALERFRYGD
QREMEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLT
HNTKHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVK
RGESEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIP
CRIFCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTL
MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYF
GSCPVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQEN
SFKPESQRQRTVLNVTDEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHK
DIDAFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSKASNG
WMALDWAKHFGQTEIVDLLESYSATLEFGNLDESSLVQTNGSDLSAEDRELLKAYHHSFD
DEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFM
LHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFV
TMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHT
KLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPH
LGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGAFSDHMAL
LRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRD
VNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKKVRFHPASVLSQPQYKKIPPA
NGQAAAIKALPTDWLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSF
RVDGIPNDSSDSEMEDKTTANLAALKLDEWLHFTLEPEAASLLLQLRQKWHSLFLRRMRA
PSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRK
SSADTEFSDECTTAERVLMKSPSPALHPPQKYKDRGILHPKRGTEDRSDQSSLKSTDSSS
YPSPCASPSPPSSGKGSKSPSPRPNMPVRYFIMKSSNLRNLEISQQKGIWSTTPSNERKL
NRAFWESSIVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESLP
FQFAHHLLNPWNDNKKVQISRDGQELEPLVGEQLLQLWERLPLGEKNTTD
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggccgagcagcgtctccccgcggcagccggctcctggcggtggcggaggcggc
ggcccctcgccttgtggccctgggggcggcggccgggccaaggggctgaaggacattcgc
attgatgaggaggtgaagatcgcagtcaatatcgcgctggagcgcttccgatacggggac
cagagagaaatggaatttccttcttctttgaccagtactgaaagagcctttattcatcga
ctcagtcagtctcttggtttggtctctaaaagtaaaggaaagggagcaaatagataccta
actgtgaagaagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgact
cataatacaaaacatgctgttaggagcctaattcaaagatttcctgtcaccaataaagag
cgtacagaacttctgcctaaaacagaaagaggaaatgtgtttgcagttgaagctgaaaac
cgggaaatgagcaagacaagtgggcgactcaacaatggcatacctcagattccagtgaaa
agaggagaatccgaatttgattcttttaggcagtctttaccagtgtttgagaaacaggaa
gaaattgttaaaataattaaggaaaataaagtagttttgattgtaggagaaactgggtct
ggaaagaccacacagattcctcagttccttttagatgattgctttaaaaatggtatcccc
tgccgtatattttgtactcaaccaagacgattggcagctatcgctgtggctgaaagagtt
gccgcagagagacgggaaaggattggtcaaacaattggttatcagatccgattagaaagc
agggtttctccaaagacacttctgacattttgtactaatggggtattgcttcgtacattg
atggcaggagatagtacgttgtcgactgtgacacatgttatcgtggatgaagtgcatgaa
agggatcgatttagtgattttttacttacaaagttaagagatttgttgcaaaagcaccca
actttgaaactaattctttctagtgctgccttggatgtaaatctctttataagatatttt
ggaagttgtccagtgatatatatacagggaagaccatttgaagtaaaagaaatgtttctg
gaagatattttaagaacaactggatatacaaacaaagaaatgttaaaatataaaaaggaa
aaacagcaagaagagaaacaacaaaccacacttacagaatggtactcagctcaagaaaat
agtttcaagcctgaatctcagaggcagagaactgttctaaatgtgactgatgagtatgac
ttactggatgatggtggtgatgctgtcttcagtcagctgactgaaaaagatgtgaattgc
cttgaaccatggttaataaaggaaatggatgcttgcctttctgatatatggctacataaa
gatattgatgcctttgctcaggtctttcatctcattttaactgaaaatgttagtgttgat
tacagacatagtgaaaccagtgcaacagctctgatggttgctgcaggacgtggctttgca
agtcaagtagaacagttaatcagtatgggagccaatgtccatagtaaagcatcaaatggc
tggatggcattggattgggctaaacactttgggcagactgaaattgtggatcttctagaa
tcttacagtgctacactggaatttggaaatctagatgaaagttctctggttcaaacaaat
ggaagtgacctcagtgctgaagacagagagctcctgaaagcttatcatcatagtttcgat
gatgaaaaagtagacttggatttgatcatgcatcttctatacaatatctgccatagttgt
gatgctggtgcagtactaatttttctgcctggatatgacgaaattgttggactgagagat
cgcatcctgtttgatgacaagcggtttgctgacagtacacatagataccaagtctttatg
cttcattcaaatatgcaaacatccgatcaaaagaaagtattaaaaaacccacctgcaggt
gttcgaaaaataattctttccaccaatattgctgaaaccagcatcacagtcaatgatgtt
gtctttgttattgattctggtaaggtgaaagagaaatcctttgatgctctgaattttgtt
acaatgttaaaaatggtatggatttccaaagctagtgccatacagcggaaaggcagggca
gggcgatgtagacctggaatttgttttcgtctgttcagtagactccgattccagaatatg
ttggaatttcagactccggaacttttgagaatgccattacaggaactttgcttacatacc
aagctgttagccccagttaattgtcccattgctgattttcttatgaaagctcctgaacct
ccaccagctttaattgtaagaaatgctgtacaaatgcttaagacaatagatgcaatggat
acatgggaagatctgactgaacttgggtatcatttggctgacttgccagtagaaccacat
cttggtaaaatggtcttgtgtgctgttgttttaaagtgtctggaccccatccttacaatt
gcttgcacactagcttatcgagatccttttgtactacctactcaggcctctcaaaaacgt
gcagctatgctttgtaggaaacgttttactgcaggagctttcagtgaccatatggcactt
ctcagagcattccaggcctggcaaaaagcacgaagtgatgggtgggagcgagccttttgt
gaaaagaattttctttcacaggctactatggaaataatcataggcatgagaacacagttg
cttggtcaacttagagcatcaggttttgttagagcacgaggtggtggtgacattcgggac
gttaacacaaactctgagaattgggctgtcgttaaagctgcattggtggcaggcatgtat
cctaatttagtccacgtggacagagagaatctagtgttgacagggccaaaggagaaaaaa
gtacgatttcatcctgcttcagttctcagtcagcctcaatataaaaagattcctccagcc
aatggtcaagctgcagcaattaaggcactgcccacagattggcttatttatgatgaaatg
accagagcccatagaatagctaatattagatgttgttcagcagtgacgcctgtcactata
ttggtattctgtggaccagctagattggcaagtaatgctcttcaggaaccttcatccttt
agagtggatggcattcccaatgacagtagtgatagtgaaatggaggacaaaactacagct
aatttggcagccttgaaacttgatgagtggctccatttcacactggagccagaggcagct
agtttattgctgcagctcagacagaagtggcatagcttatttttacgccgaatgagagct
ccatctaaaccttggtctcaagttgatgaagctaccataagagcaattatagctgtttta
agcactgaagaacagtctgcaggtttacaacaaccatctgggattggccaaaggccaagg
cctatgtcttcagaagagcttcctttggcctcatcttggaggtcaaataatagtaggaaa
agttcagcagatactgaattttctgatgagtgtactactgcagaaagagtactgatgaaa
tctccatctccagcattacacccacctcagaagtacaaagatagaggaattttacatcct
aaacgaggtactgaggaccgatcagatcagtcttctctgaaatctacagacagcagtagt
tacccaagtccttgtgctagtccttctcctccatcctcaggaaagggctcaaaatctcct
tcgccaagaccaaacatgcctgttcgatacttcataatgaagagtagcaatttgagaaac
cttgaaatttctcaacagaagggtatctggtctacaactcctagtaatgaacggaagcta
aatcgagccttttgggaaagcagcatagtttacttggtattttctgttcaaggatctgga
catttccagggattttctaggatgtcttctgagattggaagggaaaagagtcaggactgg
ggctctgctggactaggaggagtatttaaggtggagtggatacgaaaagaaagccttccc
tttcaatttgcacaccatttactcaatccatggaatgacaacaagaaagtgcagataagc
agggatgggcaggaactagaacctctggttggtgaacagttgctccagttatgggaacgt
cttcccttgggagaaaaaaacacaactgattga
DBGET
integrated database retrieval system
