Homo sapiens (human): 6656
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Entry
6656 CDS
T01001
Symbol
SOX1
Name
(RefSeq) SRY-box transcription factor 1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
hsa
Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsa03000
]
6656 (SOX1)
Transcription factors [BR:
hsa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
6656 (SOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
6656
NCBI-ProteinID:
NP_005977
OMIM:
602148
HGNC:
11189
Ensembl:
ENSG00000182968
UniProt:
O00570
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All DBs
Position
13:112067149..112071706
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AA seq
391 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGAKANQDRVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKY
RPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGG
YAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHP
HNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVAAA
AAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAAAA
AAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcccggcggcgcccaggcccccacg
aacctctcgggccccgccggggcgggcggcggcgggggcggaggcgggggcggcggcggc
ggcgggggcgccaaggccaaccaggaccgggtcaaacggcccatgaacgccttcatggtg
tggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaactcggag
atcagcaagcgcctgggggccgagtggaaggtcatgtccgaggccgagaagcggccgttc
atcgacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattacaagtac
cggccgcgccgcaagaccaagacgctgctcaagaaggacaagtactcgctggccggcggg
ctcctggcggccggcgcgggtggcggcggcgcggctgtggccatgggcgtgggcgtgggc
gtgggcgcggcggccgtgggccagcgcctggagagcccaggcggcgcggcgggcggcggc
tacgcgcacgtcaacggctgggccaacggcgcctaccccggctcggtggcggcggcggcg
gcggccgcggccatgatgcaggaggcgcagctggcctacgggcagcacccgggcgcgggc
ggcgcgcacccgcacgcgcaccccgcgcacccgcacccgcaccacccgcacgcgcacccg
cacaacccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagccccatctcc
aactcgcagggctacatgagcgcgtcgccctcgggctacggcggcctcccctacggcgcc
gcggccgccgccgccgccgctgcgggcggcgcgcaccagaactcggccgtggcggcggcg
gcggcggcggcggccgcgtcgtcgggcgccctgggcgcgctgggctctctggtgaagtcg
gagcccagcggcagcccgcccgccccagcgcactcgcgggcgccgtgccccggggacctg
cgcgagatgatcagcatgtacttgcccgccggcgaggggggcgacccggcggcggcagca
gcggccgcggcgcagagccggctgcactcgctgccgcagcactaccagggcgcgggcgcg
ggcgtgaacggcacggtgcccctgacgcacatctag
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