Homo sapiens (human): 6660
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Entry
6660 CDS
T01001
Symbol
SOX5, L-SOX5, L-SOX5B, L-SOX5F, LAMSHF
Name
(RefSeq) SRY-box transcription factor 5
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
hsa
Homo sapiens (human)
Disease
H02156
Lamb-Shaffer syndrome
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsa03000
]
6660 (SOX5)
Transcription factors [BR:
hsa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
6660 (SOX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
6660
NCBI-ProteinID:
NP_008871
OMIM:
604975
HGNC:
11201
Ensembl:
ENSG00000134532
UniProt:
P35711
LinkDB
All DBs
Position
12:complement(23529504..24562650)
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AA seq
763 aa
AA seq
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MLTDPDLPQEFERMSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPN
KPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQS
GESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAM
GSGNFGEIKGTPESLAEKERQLMGMINQLTSLREQLLAAHDEQKKLAASQIEKQRQQMEL
AKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQLPPLMIPVFPPDQRTLAAAAQQGFLL
PPGFSYKAGCSDPYPVQLIPTTMAAAAAATPGLGPLQLQQLYAAQLAAMQVSPGGKLPGI
PQGNLGAAVSPTSIHTDKSTNSPPPKSKDEVAQPLNLSAKPKTSDGKSPTSPTSPHMPAL
RINSGAGPLKASVPAALASPSARVSTIGYLNDHDAVTKAIQEARQMKEQLRREQQVLDGK
VAVVNSLGLNNCRTEKEKTTLESLTQQLAVKQNEEGKFSHAMMDFNLSGDSDGSAGVSES
RIYRESRGRGSNEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKAMTNL
EKQPYYEEQARLSKQHLEKYPDYKYKPRPKRTCLVDGKKLRIGEYKAIMRNRRQEMRQYF
NVGQQAQIPIATAGVVYPGAIAMAGMPSPHLPSEHSSVSSSPEPGMPVIQSTYGVKGEEP
HIKEEIQAEDINGEIYDEYDEEEDDPDVDYGSDSENHIAGQAN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcttactgaccctgatttacctcaggagtttgaaaggatgtcttccaagcgaccagcc
tctccgtatggggaagcagatggagaggtagccatggtgacaagcagacagaaagtggaa
gaagaggagagtgacgggctcccagcctttcaccttcccttgcatgtgagttttcccaac
aagcctcactctgaggaatttcagccagtttctctgctgacgcaagagacttgtggccat
aggactcccacttctcagcacaatacaatggaagttgatggcaataaagttatgtcttca
tttgccccacacaactcatctacctcacctcagaaggcagaagaaggtgggcgacagagt
ggcgagtccttgtctagtacagccctgggaactcctgaacggcgcaagggcagtttagct
gatgttgttgacaccttgaagcagaggaaaatggaagagctcatcaaaaacgagccggaa
gaaacccccagtattgaaaaactactctcaaaggactggaaagacaagcttcttgcaatg
ggatcggggaactttggcgaaataaaagggactcccgagagcttagctgagaaagaaagg
caactcatgggtatgatcaaccagctgaccagcctccgagagcagctgttggctgcccac
gatgagcagaagaaactagctgcctctcagattgagaaacagcgtcagcaaatggagctg
gccaagcagcaacaagaacaaattgcaagacagcagcagcagcttctacagcaacaacac
aaaatcaatttgctccagcaacagatccaggttcaaggtcagctgccgccattaatgatt
cccgtattccctcctgatcaacggacactggctgcagctgcccagcaaggattcctcctc
cctccaggcttcagctataaggctggatgtagtgacccttaccctgttcagctgatccca
actaccatggcagctgctgccgcagcaacaccaggcttaggcccactccaactgcagcag
ttatatgctgcccagctagctgcaatgcaggtatctccaggagggaagctgccaggcata
ccccaaggcaaccttggtgctgctgtatctcctaccagcattcacacagacaagagcaca
aacagcccaccacccaaaagcaaggatgaagtggcacagccactgaacctatcagctaaa
cccaagacctctgatggcaaatcacccacatcacccacctctccccatatgccagctctg
agaataaacagtggggcaggccccctcaaagcctctgtcccagcagcgttagctagtcct
tcagccagagttagcacaataggttacttaaatgaccatgatgctgtcaccaaggcaatc
caagaagctcggcaaatgaaggagcaactccgacgggaacaacaggtgcttgatgggaag
gtggctgttgtgaatagtctgggtctcaataactgccgaacagaaaaggaaaaaacaaca
ctggagagtctgactcagcaactggcagttaaacagaatgaagaaggaaaatttagccat
gcaatgatggatttcaatctgagtggagattctgatggaagtgctggagtctcagagtca
agaatttatagggaatcccgagggcgtggtagcaatgaaccccacataaagcgtccaatg
aatgccttcatggtgtgggctaaagatgaacggagaaagatccttcaagcctttcctgac
atgcacaactccaacatcagcaagatattgggatctcgctggaaagctatgacaaaccta
gagaaacagccatattatgaggagcaagcccgtctcagcaagcagcacctggagaagtac
cctgactataagtacaagcccaggccaaagcgcacctgcctggtggatggcaaaaagctg
cgcattggtgaatacaaggcaatcatgcgcaacaggcggcaggaaatgcggcagtacttc
aatgttgggcaacaagcacagatccccattgccactgctggtgttgtgtaccctggagcc
atcgccatggctgggatgccctcccctcacctgccctcggagcactcaagcgtgtctagc
agcccagagcctgggatgcctgttatccagagcacttacggtgtgaaaggagaggagcca
catatcaaagaagagatacaggccgaggacatcaatggagaaatttatgatgagtacgac
gaggaagaggatgatccagatgtagattatgggagtgacagtgaaaaccatattgcagga
caagccaactga
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integrated database retrieval system