Homo sapiens (human): 6949
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Entry
6949 CDS
T01001
Symbol
TCOF1, MFD1, TCS, TCS1, treacle
Name
(RefSeq) treacle protein isoform d
KO
K14562
Treacher Collins syndrome protein
Organism
hsa
Homo sapiens (human)
Pathway
hsa03008
Ribosome biogenesis in eukaryotes
Disease
H00610
Treacher Collins syndrome
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
6949 (TCOF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsa03009
]
6949 (TCOF1)
Ribosome biogenesis [BR:
hsa03009
]
Eukaryotic type
90S particles
Other 90S particles
6949 (TCOF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Treacle
Gal-3-0_sulfotr
Motif
Other DBs
NCBI-GeneID:
6949
NCBI-ProteinID:
NP_001128715
OMIM:
606847
HGNC:
11654
UniProt:
Q13428
LinkDB
All DBs
Position
5:150357697..150400293
Genome browser
AA seq
1488 aa
AA seq
DB search
MAEARKRRELLPLIYHHLLRAGYVRAAREVKEQSGQKCFLAQPVTLLDIYTHWQQTSELG
RKRKAEEDAALQAKKTRVSDPISTSESSEEEEEAEAETAKATPRLASTNSSVLGADLPSS
MKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSETEEEGSVP
AFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPARKAAP
APGKVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQV
RAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEETPAAKALL
QAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSE
EEAPAQAKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSE
ESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGK
WEEDSESSSEESSDSSDGEVPTAVAPAQEKSLGNILQAKPTSSPAKGPPQKAGPVAVQVK
AEKPMDNSESSEESSDSADSEEAPAAMTAAQAKPALKIPQTKACPKKTNTTASAKVAPVR
VGTQAPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEESDSEEEKTGLAVTVGQAKSVGK
GLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQ
VKTSVKKTQAKANPAAARAPSAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVL
ARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAETLAQVKPSGKTHQIRAAL
APAKESPRKGAAPTPPGKTGPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLI
FVDPNRSPAGPAATPAQAQAASTPRKARASESTARSSSSESEDEDVIPATQCLTPGIRTN
VVTMPTAHPRIAPKASMAGASSSKESSRISDGKKQEGPATQVSKKNPASLPLTQAALKVL
AQKASEAQPPVARTQPSSGVDSAVGTLPATSPQSTSVQAKGTNKLRKPKLPEVQQATKAP
ESSDDSEDSSDSSSGSEEDGEGPQGAKSAHTLGPTPSRTETLVEETAAESSEDDVVAPSQ
SLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPKT
GGKEAASGTTPQKSRKPKKGAGNPQASTLALQSNITQCLLGQPWPLNEAQVQASVVKVLT
ELLEQERKKVVDTTKESSRKGWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGEASVSPE
KTSTTSKGKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKK
EKKKSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTAEQTV
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggccaggaagcggcgggagctacttcccctgatctaccaccatctgctgcgg
gctggctatgtgcgtgcggcgcgggaagtgaaggagcagagcggccagaagtgtttcctg
gctcagcccgtaacccttctggacatctatacacactggcaacaaacctcagagcttggt
cggaagcggaaggcagaggaagatgcggcactgcaagctaagaaaacccgtgtgtcagac
cccatcagcacctcggagagctcggaagaggaggaagaagcagaagccgaaaccgccaaa
gccaccccaagactagcatctaccaactcctcagtcctgggggcggacttgccatcaagc
atgaaagaaaaagccaaggcagagacagagaaagctggcaagactgggaattccatgcca
caccctgccactgggaagacggtggccaaccttctttctgggaagtctcccaggaagtca
gcagagccctcagcaaatactacgttggtctcagaaactgaggaggagggcagcgtcccg
gcctttggagctgctgccaagcctgggatggtgtcagcgggccaggccgacagctccagc
gaggacacctccagctccagtgatgagacagacgtggaggggaaaccctcagtaaaacca
gcccaggtcaaagcctcatcagtttctactaaggagtctccagcaagaaaggcggcccca
gcccctgggaaggtgggggatgtgacaccccaggtcaaaggaggggccctgcccccagcc
aagagggccaagaagccagaagaggagtcagagagtagtgaggagggatctgaaagtgag
gaggaggcccctgcagggacacgaagccaggtaaaggcctctgaaaaaattctccaggtc
agagctgcctcagcccctgccaaggggacccctgggaaaggggctaccccagcaccccct
gggaaggcaggggctgtagcctcccagaccaaggcagggaagccagaggaggactcagag
agcagcagcgaggagtcatctgacagtgaggaggagacgccagctgccaaggccctgctt
caggcgaaggcctcaggaaaaacctctcaggtcggagctgcctcagcccctgccaaggag
tcccccaggaaaggagctgccccagcgccccctgggaagacagggcctgcagttgccaag
gcccaggcggggaagcgggaggaggactcgcagagcagcagcgaggaatcggacagtgag
gaggaggcgcctgctcaggcgaagccttcagggaaggccccccaggtcagagccgcctcg
gcccctgccaaggagtcccccaggaaaggggctgccccagcacctcctaggaaaacaggg
cctgcagccgcccaggtccaggtggggaagcaggaggaggactcaagaagcagcagcgag
gagtcagacagtgacagagaggcactggcagccatgaatgcagctcaggtgaagcccttg
gggaaaagcccccaggtgaaacctgcctctaccatgggcatggggcccttggggaaaggc
gccggcccagtgccacccgggaaggtggggcctgcaaccccctcagcccaggtggggaag
tgggaggaggactcagagagcagtagtgaggagtcatcagacagcagtgatggagaggtg
cccacagctgtggccccggctcaggaaaagtccttggggaacatcctccaggccaaaccc
acctccagtcctgccaaggggccccctcagaaggcagggcctgtagccgtccaggtcaag
gctgaaaagcccatggacaactcggagagcagcgaggagtcatcggacagtgcggacagt
gaggaggcaccagcagccatgactgcagctcaggcaaaaccagctctgaaaattcctcag
accaaggcctgcccaaagaaaaccaataccactgcatctgccaaggtcgcccctgtgcga
gtgggcacccaagccccccggaaagcaggaactgcgacttctccagcaggctcatcccca
gctgtggctgggggcacccagagaccagcagaggattcttcaagcagtgaggaatcagat
agtgaggaagagaagacaggtcttgcagtaaccgtgggacaggcaaagtctgtggggaaa
ggcctccaggtgaaagcagcctcagtgcctgtcaaggggtccttggggcaagggactgct
ccagtactccctgggaagacggggcctacagtcacccaggtgaaagctgaaaagcaggaa
gactctgagagcagtgaggaggaatcagacagtgaggaagcagctgcatctccagcacag
gtgaaaacctcagtaaagaaaacccaggccaaagccaacccagctgccgccagagcacct
tcagcaaaagggacaatttcagcccctggaaaagttgtcactgcagctgctcaagccaag
cagaggtctccatccaaggtgaagccaccagtgagaaacccccagaacagtaccgtcttg
gcgaggggcccagcatctgtgccatctgtggggaaggccgtggctacagcagctcaggcc
cagacagggccagaggaggactcagggagcagtgaggaggagtcagacagtgaggaggag
gcggagacgctggctcaggtgaagccttcagggaagacccaccagatcagagctgccttg
gctcctgccaaggagtcccccaggaaaggggctgccccaacacctcctgggaagacaggg
ccttcggctgcccaggcagggaagcaggatgactcagggagcagcagcgaggaatcagac
agtgatggggaggcaccggcagctgtgacctctgcccaggtgattaaaccccctctgatt
tttgtcgaccctaatcgtagtccagctggcccagctgctacacccgcacaagcccaggct
gcaagcaccccgaggaaggcccgagcctcggagagcacagccaggagctcctcctccgag
agcgaggatgaggacgtgatccccgctacacagtgcttgactcctggcatcagaaccaat
gtggtgaccatgcccactgcccacccaagaatagcccccaaagccagcatggctggggcc
agcagcagcaaggagtccagtcggatatcagatggcaagaaacaggagggaccagccact
caggtgtcaaagaagaacccagcttccctcccactgacccaggctgccctgaaggtcctc
gcccagaaagccagtgaggctcagcctcctgttgccaggacccagccttcaagtggggtt
gacagtgctgtgggaacactccctgcaacaagtccccagagcacctccgtccaggccaaa
gggaccaacaagctcagaaaacctaagcttcctgaggtccagcaggccaccaaagcccct
gagagctcagatgacagtgaggacagcagcgacagttcttcagggagtgaggaagatggt
gaagggccccagggggccaagtcagcccacacgctgggtcccaccccctccaggacagag
accctggtggaggagaccgcagcagagtccagcgaggatgatgtggtggcgccatcccag
tctctcctctcaggttatatgacccctggactaaccccagccaattcccaggcctcaaaa
gccactcccaagctagactccagcccctcagtttcctctactctggccgccaaagatgac
ccagatggcaagcaggaggcaaagccccaacaggcagcaggcatgttgtcccctaaaaca
ggtggaaaagaggctgcttcaggcaccacacctcagaagtcccggaagcccaagaaaggg
gctgggaacccccaagcctcaaccctggcgctgcaaagcaacatcacccagtgcctcctg
ggccaaccctggcccctgaatgaggcccaggtgcaggcctcagtggtgaaggtcctgact
gagctgctggaacaggaaagaaagaaggtggtggacaccaccaaggagagcagcaggaag
ggctgggagagccgcaagcggaagctatcgggagaccagccagctgccaggacccccagg
agcaagaagaagaagaagctgggggccggggaaggtggggaggcctctgtttccccagaa
aagacctccacgacttccaaggggaaagcaaagagagacaaagcaagtggtgatgtcaag
gagaagaaagggaaggggtctcttggctcccaaggggccaaggacgagccagaagaggag
cttcagaaggggatggggacggttgaaggtggagatcaaagcaacccaaagagcaagaag
gagaagaagaaatccgacaagagaaaaaaagacaaagaaaaaaaagaaaagaagaagaaa
gcaaaaaaggcctcaaccaaagattctgagtcaccgtcccagaagaaaaagaagaaaaag
aagaagacagcagagcagactgtatga
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integrated database retrieval system