Homo sapiens (human): 84447
Help
Entry
84447 CDS
T01001
Symbol
SYVN1, DER3, HRD1
Name
(RefSeq) synoviolin 1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
hsa
Homo sapiens (human)
Pathway
hsa04120
Ubiquitin mediated proteolysis
hsa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
84447 (SYVN1)
04120 Ubiquitin mediated proteolysis
84447 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
84447 (SYVN1)
Enzymes [BR:
hsa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
84447 (SYVN1)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
84447 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
84447
NCBI-ProteinID:
NP_757385
OMIM:
608046
HGNC:
20738
Ensembl:
ENSG00000162298
Pharos:
Q86TM6
(Tbio)
UniProt:
Q86TM6
Structure
PDB
PDBj
LinkDB
All DBs
Position
11:complement(65127279..65134519)
Genome browser
AA seq
617 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAAALSRPSGA
ATTTAAGTSATAASATASGPGSGSAPEAGPAPGFPFPPPWMGMPLPPPFAFPPMPVPPAG
FAGLTPEELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPATSV
NSTEETATTVVAAASSTSIPSSEATTPTPGASPPAPEMERPPAPESVGTEEMPEDGEPDA
AELRRRRLQKLESPVAH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcacggcagtgatgatggcggccagcctggcgctgaccggggctgtggtggct
cacgcctactacctcaaacaccagttctaccccactgtggtgtacctgaccaagtccagc
cccagcatggcagtcctgtacatccaggcctttgtccttgtcttccttctgggcaaggtg
atgggcaaggtgttctttgggcaactgagggcagcagagatggagcaccttctggaacgt
tcctggtacgccgtcacagagacttgtctggccttcaccgtttttcgggatgacttcagc
ccccgctttgttgcactcttcactcttcttctcttcctcaaatgtttccactggctggct
gaggaccgtgtggactttatggaacgcagccccaacatctcctggctctttcactgccgc
attgtctctcttatgttcctcctgggcatcctggacttcctcttcgtcagccacgcctat
cacagcatcctgacccgtggggcctctgtgcagctggtgtttggctttgagtatgccatc
ctgatgacgatggtgctcaccatcttcatcaagtatgtgctgcactccgtggacctccag
agtgagaacccctgggacaacaaggctgtgtacatgctctacacagagctgtttacaggc
ttcatcaaggttctgctgtacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccactctttgccatccggcccatgtacctggccatgagacagttcaagaaagctgtgaca
gatgccatcatgtctcgccgagccatccgcaacatgaacaccctgtatccagatgccacc
ccagaggagctccaggcaatggacaatgtctgcatcatctgccgagaagagatggtgact
ggtgccaagagactgccctgcaaccacattttccataccagctgcctgcgctcctggttc
cagcggcagcagacctgccccacctgccgtatggatgtccttcgtgcatcgctgccagcg
cagtcaccaccacccccggagcctgcggatcaggggccaccccctgccccccacccccca
ccactcttgcctcagccccccaacttcccccagggcctcctgcctccttttcctccaggc
atgttcccactgtggccccccatgggcccctttccacctgtcccgcctccccccagctca
ggagaggctgtggctcctccatccaccagtgcagcagccctttctcggcccagtggagca
gctacaaccacagctgctggcaccagtgctactgctgcttctgccacagcatctggccca
ggctctggctctgccccagaggctggccctgcccctggtttccccttccctcctccctgg
atgggtatgcccctgcctccaccctttgccttccccccaatgcctgtgccccctgcgggc
tttgctgggctgaccccagaggagctacgagctctggagggccatgagcggcagcacctg
gaggcccggctgcagagcctgcgtaacatccacacactgctggacgccgccatgctgcag
atcaaccagtacctcaccgtgctggcctccttggggcccccccggcctgccacttcagtc
aactccactgaggagactgccactacagttgttgctgctgcctcctccaccagcatccct
agctcagaggccacgaccccaaccccaggagcctccccaccagcccctgaaatggaaagg
cctccagctcctgagtcagtgggcacagaggagatgcctgaggatggagagcccgatgca
gcagagctccgccggcgccgcctgcagaagctggagtctcctgttgcccactga
DBGET
integrated database retrieval system
