Homo sapiens (human): 84570
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Entry
84570 CDS
T01001
Symbol
COL25A1, AMY, CFEOM5, CLAC, CLAC-P, CLACP
Name
(RefSeq) collagen type XXV alpha 1 chain
KO
K24356
collagen type XXV alpha
Organism
hsa
Homo sapiens (human)
Pathway
hsa04974
Protein digestion and absorption
Disease
H00838
Congenital fibrosis of the extraocular muscles
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
84570 (COL25A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hsa00536
]
84570 (COL25A1)
Glycosaminoglycan binding proteins [BR:
hsa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
84570 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
84570
NCBI-ProteinID:
NP_942014
OMIM:
610004
HGNC:
18603
Ensembl:
ENSG00000188517
UniProt:
Q9BXS0
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Position
4:complement(108808725..109302658)
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AA seq
654 aa
AA seq
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MLLKKHAGKGGGREPRSEDPTPAEQHCARTMPPCAVLAALLSVVAVVSCLYLGVKTNDLQ
ARIAALESAKGAPSIHLLPDTLDHLKTMVQEKVERLLAQKSYEHMAKIRIAREAPSECNC
PAGPPGKRGKRGRRGESGPPGQPGPQGPPGPKGDKGEQGDQGPRMVFPKINHGFLSADQQ
LIKRRLIKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLG
PPGQKGSIGAPGIPGMNGQKGEPGLPGAVGQNGIPGPKGEPGEQGEKGDAGENGPKGDTG
EKGDPGSSAAGIKGEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGLPGLPGT
KGERGEAGPPGRGERGEPGAPGPKGKQGESGTRGPKGSKGDRGEKGDSGAQGPRGPPGQK
GDQGATEIIDYNGNLHEALQRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGMDGEQGL
KGSKGDMGDPGMTGEKGGIGLPGLPGANGMKGEKGDSGMPGPQGPSIIGPPGPPGPHGPP
GPMGPHGLPGPKGTDGPMGPHGPAGPKGERGEKGAMGEPGPRGPYGLPGKDGEPGLDGFP
GPRGEKGDLGEKGEKGFRGVKGEKGEPGQPGLDGLDAPCQLGPDGLPMPGCWQK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgaagaagcacgcagggaaaggagggggccgggagcccagatccgaggacccg
acccctgccgaacagcattgtgcccggaccatgcccccgtgtgccgtcctggcggccctc
ctgtcagtggtggccgtggtgtcttgcctgtacctgggtgtgaaaaccaacgacctccag
gcgaggatcgccgctctcgaatccgccaaaggggccccttccattcatctgctgcctgat
accctggatcacctcaagactatggtgcaagagaaagtggagcgacttctggctcagaaa
tcctatgaacatatggctaaaataagaatcgcaagagaagcaccttcagaatgtaactgc
ccagcaggccctccagggaaacgaggtaagagaggccgaagaggagaatctggtcctcct
ggacagcctggtcctcagggccctcctggtccaaaaggcgataagggagaacaaggtgat
cagggacctaggatggtgtttcctaaaatcaatcatgggtttctctctgctgatcagcag
ctcattaaacgccgcctgattaagggtgaccaaggacaggcagggcctccaggaccccct
ggccctccaggcccaagagggccacctggggacacagggaaagatggcccccgtggaatg
ccaggagtacccggtgaaccaggaaagccaggagaacaaggcttgatgggtcctctaggg
cctccgggacaaaagggttctattggagcacctggaattccagggatgaatgggcaaaag
ggtgagcccgggttgcctggagcagtaggacagaatggaataccaggacctaagggagaa
cctggagaacaaggtgaaaagggagacgctggagagaacggccccaagggtgacacaggc
gaaaagggtgaccctggatcatctgctgcaggaattaagggagaacctggggaatctggt
cgtccagggcaaaagggtgaaccagggcttcctgggcttcctggacttccggggataaag
ggagaaccaggtttcattggtcctcaaggagaaccaggcttaccaggtttaccaggaaca
aaaggtgaacggggggaagcagggcctcctggaagaggtgagcgaggggaacctggagcc
cccggaccaaaggggaaacaaggtgaatcaggaactagaggcccaaaggggtcaaagggg
gatcgtggagaaaaaggggactctggagctcagggaccaaggggtccacctggtcaaaaa
ggggatcaaggagccactgagatcatagactacaacggcaacctccacgaagccttacag
aggattaccaccttaactgtcacgggtccccctggacctcctggacctcaaggactacaa
gggccaaagggagagcagggatctccaggaatcccaggaatggatggagagcagggactc
aaaggctcaaagggagacatgggggacccaggtatgacaggtgaaaaaggaggaattgga
cttcctggattaccgggagccaatggaatgaaaggagaaaaaggagattctggaatgccg
ggtccacagggtccttctatcataggcccaccaggcccaccaggtccccatggcccacct
ggccccatgggacctcatggacttcctggaccaaagggtacagatggtcctatgggaccc
catggccctgcaggtcccaaaggagaaagaggtgaaaaaggagctatgggagagcctgga
ccaagagggccctatgggctgcctgggaaagatggagagcctggtcttgatggcttccct
ggtccacggggtgagaagggtgatctaggagaaaagggagaaaagggattccgtggcgtt
aagggggaaaaaggggagccaggccagcctggcctggatgggctggatgccccttgccaa
ttggggccagatggcttacccatgcctggctgttggcaaaagtga
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