Homo sapiens (human): 85363
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Entry
85363 CDS
T01001
Symbol
TRIM5, RNF88, TRIM5alpha
Name
(RefSeq) tripartite motif containing 5
KO
K10648
tripartite motif-containing protein 5 [EC:
2.3.2.27
]
Organism
hsa
Homo sapiens (human)
Pathway
hsa03250
Viral life cycle - HIV-1
hsa05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
85363 (TRIM5)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
85363 (TRIM5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
85363 (TRIM5)
Enzymes [BR:
hsa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
85363 (TRIM5)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
85363 (TRIM5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-RING_5
zf-RING_2
TMF_TATA_bd
zf-C3HC4_3
FAM76
U-box
zf-RING_4
Mis12
zf-RING_10
zf-Nse
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
85363
NCBI-ProteinID:
NP_149023
OMIM:
608487
HGNC:
16276
Ensembl:
ENSG00000132256
Pharos:
Q9C035
(Tbio)
UniProt:
Q9C035
Structure
PDB
LinkDB
All DBs
Position
11:complement(5588635..5685074)
Genome browser
AA seq
493 aa
AA seq
DB search
MASGILVNVKEEVTCPICLELLTQPLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRI
SYQPENIRPNRHVANIVEKLREVKLSPEGQKVDHCARHGEKLLLFCQEDGKVICWLCERS
QEHRGHHTFLTEEVAREYQVKLQAALEMLRQKQQEAEELEADIREEKASWKTQIQYDKTN
VLADFEQLRDILDWEESNELQNLEKEEEDILKSLTNSETEMVQQTQSLRELISDLEHRLQ
GSVMELLQGVDGVIKRTENVTLKKPETFPKNQRRVFRAPDLKGMLEVFRELTDVRRYWVD
VTVAPNNISCAVISEDKRQVSSPKPQIIYGARGTRYQTFVNFNYCTGILGSQSITSGKHY
WEVDVSKKTAWILGVCAGFQPDAMCNIEKNENYQPKYGYWVIGLEEGVKCSAFQDSSFHT
PSVPFIVPLSVIICPDRVGVFLDYEACTVSFFNITNHGFLIYKFSHCSFSQPVFPYLNPR
KCGVPMTLCSPSS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggaatcctggttaatgtaaaggaggaggtgacctgccccatctgcctggaa
ctcctgacacaacccctgagcctggactgcggccacagcttctgccaagcatgcctcact
gcaaaccacaagaagtccatgctagacaaaggagagagtagctgccctgtgtgccggatc
agttaccagcctgagaacatacggcctaatcggcatgtagccaacatagtggagaagctc
agggaggtcaagttgagcccagaggggcagaaagttgatcattgtgcacgccatggagag
aaacttctactcttctgtcaggaggacgggaaggtcatttgctggctttgtgagcggtct
caggagcaccgtggtcaccacacgttcctcacagaggaggttgcccgggagtaccaagtg
aagctccaggcagctctggagatgctgaggcagaagcagcaggaagctgaagagttagaa
gctgacatcagagaagagaaagcttcctggaagactcaaatacagtatgacaaaaccaac
gtcttggcagattttgagcaactgagagacatcctggactgggaggagagcaatgagctg
caaaacctggagaaggaggaggaagacattctgaaaagccttacgaactctgaaactgag
atggtgcagcagacccagtccctgagagagctcatctcagatctggagcatcggctgcag
gggtcagtgatggagctgcttcagggtgtggatggcgtcataaaaaggacggagaacgtg
accttgaagaagccagaaacttttccaaaaaatcaaaggagagtgtttcgagctcctgat
ctgaaaggaatgctagaagtgtttagagagctgacagatgtccgacgctactgggttgat
gtgacagtggctccaaacaacatttcatgtgctgtcatttctgaagataagagacaagtg
agctctccgaaaccacagataatatatggggcacgagggacaagataccagacatttgtg
aatttcaattattgtactggcatcctgggctctcaaagtatcacatcagggaaacattac
tgggaggtagacgtgtccaagaaaactgcttggatcctgggggtatgtgctggcttccaa
cctgatgcaatgtgtaatattgaaaaaaatgaaaattatcaacctaaatacggctactgg
gttatagggttagaggaaggagttaaatgtagtgctttccaggatagttccttccatact
ccttctgttcctttcattgtgcccctctctgtgattatttgtcctgatcgtgttggagtt
ttcctagactatgaggcttgcactgtctcattcttcaatatcacaaaccatggatttctc
atctataagttttctcactgttctttttctcagcctgtatttccatatttaaatcctaga
aaatgtggagtccccatgactctgtgctcaccaagctcttga
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