Homo sapiens (human): 9392
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Entry
9392 CDS
T01001
Symbol
TGFBRAP1, TRAP-1, TRAP1, VPS3
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform 1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
hsa
Homo sapiens (human)
Pathway
hsa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
9392 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsa04131
]
9392 (TGFBRAP1)
Membrane trafficking [BR:
hsa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
9392 (TGFBRAP1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
TPR_Vps41
VPS3_N
Motif
Other DBs
NCBI-GeneID:
9392
NCBI-ProteinID:
NP_001136093
OMIM:
606237
HGNC:
16836
UniProt:
Q8WUH2
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Position
2:complement(105249404..105329735)
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AA seq
860 aa
AA seq
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MMSIKAFTLVSAVERELLMGDKERVNIECVECCGRDLYVGTNDCFVYHFLLEERPVPAGP
ATFTATKQLQRHLGFKKPVNELRAASALNRLLVLCDNSISLVNMLNLEPVPSGARIKGAA
TFALNENPVSGDPFCVEVCIISVKRRTIQMFLVYEDRVQIVKEVSTAEQPLAVAVDGHFL
CLALTTQYIIHNYSTGVSQDLFPYCSEERPPIVKRIGRQEFLLAGPGGLGMFATVAGISQ
RAPVHWSENVIGAAVSFPYVIALDDEFITVHSMLDQQQKQTLPFKEGHILQDFEGRVIVA
TSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKGARRNIPKEKFQVMYRRILQQAGFIQ
FAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFTRSHPPLHEYADLNQLTQGDQEK
MAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEADHDSLLDLLVTENFCLLTDSA
AWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVNGDVQDSTRSDLYEYIVDFLTYCLDEE
LVWAYADWVLQKSEEVGVQVFTKRPLDEQQKNSFNPDDIINCLKKYPKALVKYLEHLVID
KRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEATETQAKLRRLLQKSDLYRVHFLLERL
QGAGLPMESAILHGKLGEHEKALHILVHELQDFAAAEDYCLWCSEGRDPPHRQQLFHTLL
AIYLHAGPTAHELAVAAVDLLNRHATEFDAAQVLQMLPDTWSVQLLCPFLMGAMRDSIHA
RRTMQVALGLARSENLIYTYDKMKLKGSSIQLSDKKLCQICQNPFCEPVFVRYPNGGLVH
THCAASRHTNPSSSSPGTRT
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcatcaaagcctttacgcttgtctctgctgtggagcgggagctgctgatgggc
gacaaggagcgcgtcaacatagagtgcgtggagtgctgcggcagggacctctacgtgggc
accaacgactgcttcgtctaccacttcctgttggaggagaggccagtgcctgctgggcca
gccacgttcactgccaccaaacagctgcagagacacttgggcttcaagaagcccgtgaac
gagctgcgtgcggcctcagcactcaacaggctgctggtgctgtgtgacaactccatcagc
ctggtcaacatgctgaacctcgagccagtgccttcgggggcccgcatcaagggggcagcc
acgtttgcactgaacgagaaccctgtgagtggggaccccttctgtgtagaagtttgcatc
atctctgtcaaacgcagaaccatccagatgtttctggtgtacgaggaccgggtgcagatc
gtcaaggaggtgtcgactgccgagcagcccctcgctgtggctgtggacggccacttcctg
tgtctggctctgaccactcagtacatcatccacaattacagcacaggcgtctcccaggac
ctgtttccctactgcagtgaggagaggccgccgatcgtcaagaggatagggagacaggag
ttcctgctggcgggccccggagggctgggcatgtttgccacagtcgcagggatatcccag
cgcgcccccgtgcactggtcggagaatgtgattggggcggctgtgtcctttccatacgtc
atagcgctcgatgacgaattcatcacagtccacagcatgttggatcagcaacagaagcag
acgctgccctttaaggagggccatatcctacaggactttgaaggaagagtgatcgttgcc
acaagtaaaggagtttacatcttggttccattacctttggaaaaacaaatacaggatctt
ctagcaagccgcagagtagaagaggctttggttttagcaaaaggagcccggaggaacatt
ccaaaggaaaaatttcaggtaatgtacagaaggattctgcagcaggcgggatttatacag
tttgcacaacttcagttcctggaagctaaagagctcttcagaagcggccagcttgatgtc
cgggagctgatctctctctaccccttcctgttgcccacctcctcctccttcacccggtcc
caccctcctcttcatgagtacgcagacctgaaccagctgacccagggggaccaggagaag
atggccaagtgcaaacgcttcctcatgagctacctgaacgaggtccgcagcacagaggta
gcaaatggctacaaggaggacatcgacacagccttgctcaaactgtatgcagaggctgac
cacgacagcctgctggacctcctggtcactgagaacttctgtcttctgacggacagtgct
gcctggctagagaagcacaaaaagtattttgcacttggactgctctatcattataataac
caagatgctgctgcagttcagttgtgggtgaacattgtgaatggcgatgtccaggactcc
acacgctcagacctgtatgaatacatcgtggattttcttacctactgcttagacgaggaa
ctagtgtgggcctatgctgattgggtcctgcagaaaagtgaagaggtcggagttcaggtt
ttcaccaagagacctttggatgaacagcagaagaacagttttaatccagacgacattatc
aattgccttaaaaaataccctaaagcccttgtgaagtatctggaacatcttgtgatagac
aagagactgcagaaagaagagtatcacacccacttagctgtgctgtacctggaagaggtg
ctgctgcagagggcctccgccagtggcaagggtgcagaggccaccgagacgcaggccaag
ctgcggcggctgctccagaaatctgatttataccgagtccactttcttctcgagaggctg
cagggagctggcctgcccatggagagcgccatcctgcacgggaagctgggcgagcatgag
aaggcgctgcatatcctggtgcacgagctgcaggactttgcagcggccgaggactactgc
ctgtggtgctccgagggccgagacccaccccaccgccagcaactctttcacacgctgctg
gccatctacctgcatgctggccccactgcccacgagctggccgtggctgccgtggacctg
ctgaaccgccacgccaccgaatttgatgcagcccaggtgctgcagatgctgcctgacacc
tggtcagtgcagctcctctgcccattcctgatgggggccatgagggacagcatccatgcc
aggaggaccatgcaggtggctctcggcctggccaggtccgaaaacttaatctacacctac
gataagatgaagttgaaaggaagctcaatccaactctcagacaaaaagctttgtcagata
tgccaaaatcccttttgtgagcctgtgtttgttagatacccaaatggtggtcttgtgcac
acccactgtgccgccagcagacacacaaaccccagctcatccagtcctggcactcggact
tga
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