Homo sapiens (human): 9416
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Entry
9416 CDS
T01001
Symbol
DDX23, PRPF28, SNRNP100, U5-100K, U5-100KD, prp28
Name
(RefSeq) DEAD-box helicase 23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
hsa
Homo sapiens (human)
Pathway
hsa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
9416 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hsa03041
]
9416 (DDX23)
Enzymes [BR:
hsa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
9416 (DDX23)
Spliceosome [BR:
hsa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
9416 (DDX23)
Complex C
U5 SnRNP specific factors
9416 (DDX23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
9416
NCBI-ProteinID:
NP_004809
OMIM:
612172
HGNC:
17347
Ensembl:
ENSG00000174243
UniProt:
Q9BUQ8
B3KY11
Structure
PDB
PDBj
LinkDB
All DBs
Position
12:complement(48829756..48852163)
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AA seq
820 aa
AA seq
DB search
MAGELADKKDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSR
SRSRSKSAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRK
DRDSKKDEEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQE
VEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREE
KDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLG
RGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQK
KLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQ
AIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTREL
AQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVL
SRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYR
QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE
QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVA
TDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELK
QAILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagagctggctgacaaaaaggaccgtgatgcatcaccttccaaggaggaaagg
aagcgatcacggactcctgacagagagcgggatagagaccgggaccggaagtcttcccca
tctaaagatagaaagcggcatcgttcaagggatagacgtcgaggaggcagccgttctcgc
tctcgttcccgttccaaatctgcagaaagagaacgacggcacaaagaacgagaacgagat
aaggagcgggatcggaataagaaggaccgagatcgagacaaggatgggcacagacgggac
aaggaccgtaaacgatccagcttatctcctggtcgaggaaaagactttaaatctcggaag
gacagagactctaagaaggatgaagaggatgaacatggtgataagaagcctaaggcccag
ccattatccctggaggagcttctggccaagaaaaaggctgaggaagaagctgaggctaag
cccaagttcctctctaaagcagaacgagaggctgaagctctaaagcgacggcagcaggag
gtggaagagcggcagaggatgcttgaagaagagaggaagaaaaggaaacagttccaagac
ttgggcaggaagatgttggaagatcctcaggaacgggaacgtcgggaacgcagggagagg
atggaacgggagaccaatggaaatgaggatgaggaagggcggcagaagatccgggaagag
aaggataagagcaaggaactgcatgccattaaggagcgttacctgggtggcatcaaaaag
cggcgccgaacgagacatctcaatgaccggaaatttgtttttgagtgggatgcatctgag
gacacatccattgactacaaccccctgtacaaagaacggcaccaggtgcagttgttaggg
cgaggcttcattgcaggcattgacctcaagcagcagaagcgagagcagtcacgtttctat
ggagacctaatggagaagaggcgaaccctggaagaaaaggagcaggaggaggcaagactc
cgcaaacttcgtaagaaggaagccaagcagcgctgggatgatcgtcattggtctcagaaa
aagttagatgagatgacggacagggactggcggatcttccgtgaggactacagcatcacc
accaaaggtggcaagatccccaatcccatccgatcctggaaagactcttctctgccccca
cacatcttggaggtcattgataagtgtggctacaaggaaccaacacctatacagcgtcag
gcaattcccattgggctacagaatcgtgacatcattggtgtggctgagactggcagtggc
aagacagcagccttcctcatccctctgctggtctggatcaccacacttcccaaaattgac
aggatcgaagagtcagaccaaggcccttatgccatcatcctggctcccacccgtgagttg
gctcaacagattgaggaagagaccatcaagtttgggaaaccgctaggtatccgcactgtg
gctgtcattggtggcatctccagagaagaccagggcttcaggctgcgcatgggttgtgag
attgtgattgctacccctgggcgtttgattgatgtgctggagaaccgctacctggtgctg
agccgctgtacctatgtggttctggatgaggcagataggatgattgacatgggctttgag
ccagatgtccagaagatcctggagcacatgcctgtcagcaaccagaagccagacacggat
gaggctgaggaccctgagaagatgctggccaactttgagtcgggaaaacataagtaccgc
caaacagtcatgttcacggccaccatgcccccagcggtggagcgtctggccaggagctat
cttcggcgacctgctgtggtgtacattggctccgcaggcaagccccatgagcgtgtggaa
cagaaggtcttcctcatgtcagagtcagaaaagaggaaaaagctgctggcaatcttggag
caaggctttgacccacccatcattatttttgtcaaccagaagaagggctgcgacgtgttg
gccaaatccctggagaagatggggtacaatgcttgcacactgcacggtggaaaaggccag
gagcagcgagagtttgcgttgtccaacctcaaggctggggccaaggatattttggtggct
acagatgtggctggtcgtggtattgacatccaagatgtgtctatggttgtcaactatgat
atggccaaaaatattgaagattacatccaccgcattggccgcacgggacgagcaggcaag
agtggggtggccatcaccttcctcacaaaagaggactctgctgtgttctacgagctgaag
caagctatcctggaaagcccagtgtcttcctgtccccccgaactagccaaccacccagat
gcccagcataagccaggcaccatcctcaccaagaagcgccgggaagagaccatctttgcc
tga
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