Homo sapiens (human): 9525
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Entry
9525 CDS
T01001
Symbol
VPS4B, MIG1, SKD1, SKD1B, VPS4-2
Name
(RefSeq) vacuolar protein sorting 4 homolog B
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
hsa
Homo sapiens (human)
Pathway
hsa03250
Viral life cycle - HIV-1
hsa03272
Virion - Hepatitis viruses
hsa04144
Endocytosis
hsa04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
9525 (VPS4B)
03272 Virion - Hepatitis viruses
9525 (VPS4B)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
9525 (VPS4B)
09143 Cell growth and death
04217 Necroptosis
9525 (VPS4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hsa04131
]
9525 (VPS4B)
03400 DNA repair and recombination proteins [BR:
hsa03400
]
9525 (VPS4B)
Membrane trafficking [BR:
hsa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
9525 (VPS4B)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
Check point factors
Other check point factors
9525 (VPS4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
AAA_16
TIP49
AAA_14
RuvB_N
AAA_5
AAA_22
IstB_IS21
AAA_25
DUF815
AAA_18
AAA_2
AAA_17
nSTAND3
RNA_helicase
AAA_24
NPHP3_N
AAA_33
PhoH
AAA_7
Mg_chelatase
ResIII
AAA_28
Parvo_NS1
Csx12
NACHT
KAP_NTPase
TPR_1
bpMoxR
ABC_tran
MCM
Motif
Other DBs
NCBI-GeneID:
9525
NCBI-ProteinID:
NP_004860
OMIM:
609983
HGNC:
10895
Ensembl:
ENSG00000119541
UniProt:
O75351
Structure
PDB
PDBj
LinkDB
All DBs
Position
18:complement(63389190..63422476)
Genome browser
AA seq
444 aa
AA seq
DB search
MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRA
KCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQL
QGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGK
SYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLC
GSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPL
PEPHARAAMFKLHLGTTQNSLTEADFRELGRKTDGYSGADISIIVRDALMQPVRKVQSAT
HFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMSDMLRSLSN
TKPTVNEHDLLKLKKFTEDFGQEG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccacttcgcccaacctccagaaagcgatagatctggctagcaaagcagcgcaa
gaagacaaggctgggaactacgaagaagcccttcagctctatcagcatgctgtgcagtat
tttcttcatgtcgttaaatatgaagcacagggtgataaagccaagcaaagtatcagggca
aagtgtacagaatatcttgatagagcagaaaaactaaaggagtacctgaaaaataaagag
aaaaaagcacagaagccagtgaaagaaggacagccgagtccagcagatgagaaggggaat
gacagtgatggggaaggagaatctgatgatcctgaaaaaaagaaactacagaatcaactt
caaggtgccattgttatagaacgaccaaatgtgaaatggagtgacgttgctggacttgaa
ggagccaaagaagcactgaaagaggctgtgatactgcctattaaatttcctcatcttttt
acaggcaagagaacaccttggaggggaatcctattatttgggccgcctggaacaggaaag
tcctacttagccaaagctgtagcaacagaagccaacaactcaacatttttttcaatatct
tcctctgatcttgtttctaagtggctaggtgaaagtgaaaaactggttaagaatttattc
caacttgccagagagaacaagccctccattatcttcattgatgaaattgattctctctgt
ggttcaagaagtgaaaatgaaagtgaagccgcacgtagaattaagacggagttcctagtg
caaatgcaaggggttggtgtagacaatgatggaattttggttctgggagctacaaatata
ccctgggttctggattctgccattaggcgaagatttgagaaacgaatttatattcccttg
ccggaaccccatgcccgagcagcaatgtttaaactgcacctagggaccactcagaacagt
ctcacggaagcagactttcgggaacttgggaggaaaacagatggttattcaggggcagat
ataagtatcattgtacgtgatgcccttatgcagcctgttaggaaagtacagtcagctact
cattttaaaaaggttcgcggaccttcccgagctgatcctaaccatcttgtagatgatctg
ctaacaccttgctctccaggtgaccctggtgccattgaaatgacatggatggatgtccct
ggagataaacttttggagccagttgtttccatgtcggatatgttgcggtcactatctaac
acaaaacctacagtcaatgaacatgacttgttgaaattaaagaagtttacagaagatttt
ggtcaagaaggctaa
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