Homo sapiens (human): 9879 Help Entry 9879              CDS       T01001                                  Symbol DDX46, PRPF5, Prp5 Name (RefSeq) DEAD-box helicase 46   KO K12811   ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7] Organism hsa  Homo sapiens (human) Pathway hsa03040   Spliceosome Network nt06547  Spliceosome   Element N01968   Spliceosome assembly (E and A complex formation) Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     9879 (DDX46)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:hsa03041]     9879 (DDX46) Enzymes [BR:hsa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      9879 (DDX46) Spliceosome [BR:hsa03041]  Complex A   U2 snRNP components    U2 related factors     9879 (DDX46)  Complex B     9879 (DDX46) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C KH_12 KH-I_KHDC4-BBP CdAMP_rec Motif Other DBs NCBI-GeneID:  9879 NCBI-ProteinID:  NP_055644 OMIM:  617848 HGNC:  18681 Ensembl:  ENSG00000145833 UniProt:  Q7L014 Structure PDBPDBj LinkDB All DBs Position 5:134758779..134831121 Genome browser AA seq 1031 aa AA seqDB search MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRS KEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA PTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQL AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISE YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY QPTNKGRYKVL NT seq 3096 nt NT seq  +upstreamnt  +downstreamnt atgggtcgggagtcacgccactatcgaaaacgatcggcatcccggggtcgctctggaagt cggtctagaagtcgctcaccctcagacaaaagaagtaaacgtggagatgacagacggtct agaagtagagatagagataggaggagagagaggtctcgtagcagggataaaagaagatct cggtcaagggacaggaagcgtctgagacgttccagaagtagagagagagacagaagccga gagcgaagaagatctcgaagtagagacaggagacgctcaaggagtagaagccggggccgg cgatcccgatcctccagtcctggaaataaaagcaagaaaactgagaatagatctaggtcc aaagagaaaactgatggtggggaaagttctaaagagaagaaaaaagacaaagatgacaag gaggatgaaaaagaaaaagatgctggcaactttgaccagaataagctggaagaagaaatg agaaagcgaaaagaaagagtagaaaaatggcgagaagagcaacgtaaaaaggctatggaa aacataggagaactgaaaaaggaaatcgaagagatgaaacaagggaaaaagtggagttta gaggacgatgatgatgacgaagatgatcctgcagaagctgaaaaggagggaaatgaaatg gagggtgaggagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaa aaatttaacatgagaagtgtaaaaggtggtgggggaaatgaaaagaagtctgggccaacg gtcacaaaagttgtcactgttgtgacaaccaaaaaagcagttgtggattctgataagaag aaaggtgagctgatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa gttgatcttcagacagcccttacagggtatcaaacaaaacagcgaaagcttctagaacca gttgatcatggaaaaattgagtatgagccatttaggaaaaacttctatgttgaagttcca gaactagcaaaaatgtctcaagaagaggtaaatgtgtttcgattggaaatggagggcatt acagttaaaggaaaaggttgccccaaaccaattaaatcctgggtccagtgtggaatttcc atgaagatcttaaattccctcaagaagcatggctatgaaaagcccacgcccatccaaacc caagctattcctgctataatgtctggacgagatttgattggcattgccaaaacaggaagt ggaaagaccattgcttttctgttgcccatgtttagacacatcatggatcagaggtcatta gaggaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacag attactaaagagtgtaagaagttttccaagactttgggacttagagtggtctgtgtttac ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt tgcacacctggtcgaatgattgacatgttagccgctaacagtggtcgggtcacaaatctt cgaagagtgacatatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa ccccaggtcatgcgcatcgtggataatgttcgtcctgatcgacagacggttatgttttca gctactttccccagagctatggaggctttggctcgcaggatcctcagtaaacctattgaa gtacaagttggaggcaggagtgtggtttgctcagatgtggagcaacaagtgattgtgatt gaagaagaaaagaaattcttgaagttacttgagcttctaggccattatcaagagtcagga tctgtcattatatttgtggataagcaggaacatgctgatggtcttcttaaggatttaatg agagcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc atcataaatgactttaagaatgggacctgcaaacttcttgtggctacctctgttgctgcc cgaggtctagatgtgaaacatctgattcttgtagtaaattatagctgccccaaccattat gaggattatgtacacagagcagggcggactggaagagcaggaaacaagggttatgcttat acttttatcacagaggatcaagctcgctatgctggtgacataattaaagctcttgaattg tcagggactgcagtacctcctgatttagagaaactgtggagtgatttcaaagatcagcag aaagctgaggggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt gatgaaacagaacaagctttggctaatgagaggaagaagttacaaaaagcagctcttggt ctacaagattcagatgatgaggatgctgcagttgatattgatgagcaaattgaaagcatg tttaattcaaagaagagagtaaaggatatggctgctcctggaacatcaagtgttcctgct ccaactgcaggaaatgctgagaaattagaaattgctaagagattggctcttagaatcaat gcccagaagaatttgggcatcgagtctcaggatgtgatgcagcaggccaccaatgcaatt cttaggggtggcaccattctggctcccactgtttctgcaaaaaccattgcagaacaactt gctgaaaagatcaatgccaagctcaattatgtgccgttagagaaacaagaagaagagaga caggatggtggacagaatgaatcttttaagagatatgaagaagaattagagatcaatgac ttcccacagactgctaggtggaaagttacctctaaggaagctctgcagagaatcagtgaa tactctgaagccgcaattacaatcagaggaacctacttccctcctggcaaagaacccaag gaaggcgagcggaagatttacttggcaattgaaagtgccaatgaactggctgtgcagaaa gcaaaggcagaaatcaccaggctcataaaagaagagctgatccggctgcaaaattcatac caaccaacaaataaaggaagatacaaagtcttatag

Homo sapiens (human): 7919 Help Entry 7919              CDS       T01001                                  Symbol DDX39B, BAT1, D6S81E, UAP56 Name (RefSeq) DExD-box helicase 39B   KO K12812   ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7] Organism hsa  Homo sapiens (human) Pathway hsa03013   Nucleocytoplasmic transport hsa03015   mRNA surveillance pathway hsa03040   Spliceosome Network nt06547  Spliceosome   Element N01968   Spliceosome assembly (E and A complex formation) N01995   mRNA export to the cytoplasm Brite KEGG Orthology (KO) [BR:hsa00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     7919 (DDX39B)   09122 Translation    03013 Nucleocytoplasmic transport     7919 (DDX39B)    03015 mRNA surveillance pathway     7919 (DDX39B)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:hsa03019]     7919 (DDX39B)    03041 Spliceosome [BR:hsa03041]     7919 (DDX39B) Enzymes [BR:hsa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      7919 (DDX39B) Messenger RNA biogenesis [BR:hsa03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     EJC complex      7919 (DDX39B) Spliceosome [BR:hsa03041]  Complex C   Other components    EJC/TREX     7919 (DDX39B)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     7919 (DDX39B) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII CMS1 Cas3-like_C_2 Motif Other DBs NCBI-GeneID:  7919 NCBI-ProteinID:  NP_004631 OMIM:  142560 HGNC:  13917 Ensembl:  ENSG00000198563 UniProt:  Q13838 A0A024RCM3 Structure PDBPDBj LinkDB All DBs Position 6:complement(31530226..31542003) Genome browser AA seq 428 aa AA seqDB search MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI SSYIEQTR NT seq 1287 nt NT seq  +upstreamnt  +downstreamnt atggcagagaacgatgtggacaatgagctcttggactatgaagatgatgaggtggagaca gcagctgggggagatggggctgaggcccctgccaagaaggatgtcaagggctcctatgtc tccatccacagctctggctttcgtgacttcctgctcaagccagagttgctccgggccatt gtcgactgtggctttgagcatccgtcagaagtccagcatgagtgcatccctcaggccatt ctgggaatggatgtcctgtgccaggccaagtcgggcatgggaaagacagcagtgtttgtc ttggccacactgcaacagctggagccagttactgggcaggtgtctgtactggtgatgtgt cacactcgggagttggcttttcagatcagcaaggaatatgagcgcttctctaaatacatg cccaatgtcaaggttgctgttttttttggtggtctgtctatcaagaaggatgaagaggtg ctgaagaagaactgcccgcatatcgtcgtggggactccaggccgtatcctagccctggct cgaaataagagcctcaacctcaaacacattaaacactttattttggatgaatgtgataag atgcttgaacagctcgacatgcgtcgggatgtccaggaaatttttcgcatgaccccccac gagaagcaggtcatgatgttcagtgctaccttgagcaaagagatccgtccagtctgccgc aagttcatgcaagatccaatggagatcttcgtggatgatgagacgaagttgacgctgcat gggttgcagcagtactacgtgaaactgaaggacaacgagaagaaccggaagctctttgac cttctggatgtccttgagttcaaccaggtggtgatctttgtgaagtctgtgcagcggtgc attgccttggcccagctactagtggagcagaacttcccagccattgccatccaccgtggg atgccccaggaggagaggctttctcggtatcagcagtttaaagattttcaacgacgaatt cttgtggctaccaacctatttggccgaggcatggacatcgagcgggtgaacattgctttt aattatgacatgcctgaggattctgacacctacctgcatcgggtggccagagcaggccgg tttggcaccaagggcttggctatcacatttgtgtccgatgagaatgatgccaagatcctc aatgatgtgcaggatcgctttgaggtcaatattagtgagctgcctgatgagatagacatc tcctcctacattgaacagacacggtag

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