KEGG   Halorubrum salinarum: HPS36_07740
Entry
HPS36_07740       CDS       T07841                                 
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
hsai  Halorubrum salinarum
Pathway
hsai03030  DNA replication
hsai03410  Base excision repair
hsai03420  Nucleotide excision repair
hsai03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hsai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HPS36_07740 (ligA)
   03410 Base excision repair
    HPS36_07740 (ligA)
   03420 Nucleotide excision repair
    HPS36_07740 (ligA)
   03430 Mismatch repair
    HPS36_07740 (ligA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsai03032]
    HPS36_07740 (ligA)
   03400 DNA repair and recombination proteins [BR:hsai03400]
    HPS36_07740 (ligA)
Enzymes [BR:hsai01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     HPS36_07740 (ligA)
DNA replication proteins [BR:hsai03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HPS36_07740 (ligA)
DNA repair and recombination proteins [BR:hsai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     HPS36_07740 (ligA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HPS36_07740 (ligA)
   MMR (mismatch excision repair)
    DNA ligase
     HPS36_07740 (ligA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      HPS36_07740 (ligA)
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase HHH_2 HHH_5 BRCT HHH DNA_ligase_ZBD 5_3_exonuc DUF3864 RUBY_RBDX
Other DBs
NCBI-ProteinID: QKG92745
UniProt: A0A7D3YAD8
LinkDB
Position
1546638..1548806
AA seq 722 aa
MTTPSTRHADPAENPYVEDPPTEFDPVEDLSADEAAEQADLLRAAVREHDHRYYVAADPL
ISDAAYDALFARLEALEAAFDLPTEGSPTRRVGGEPLDELATVEHVAPMRSIDNATDADA
VREFDERVRGGLADAAEAGDLPDFDPADLAYVCEPKFDGLSIEVIYEDGEYVRAATRGDG
REGDDVTEQVRTIPSVPGRLRGDDHPARLAVRGEVYMPRDAFEAYNEELIERGEEPFANP
RNAAAGTLRQLDPAVVAERPLDVFFFDVLAWEAGEDGPERPARHRDALDAFESLGLRRND
RVEVVDDVEAAIEYRDAVLDARDDLNYAVDGVVIKVDALAHREALGSTSRAPRWAFAHKF
PPRTATTTVQGITVQVGRTGRLTPVAELDPVDVGGVTVSRATLHNPAEIEALGVDVGDRV
RIYRAGDVIPYVPEVVEKRSEGTYEFPDACPVCGAAVERDGPLAFCTGGLGCPAQLERAV
EHWARRDALDVEGLGPERVEQLREAGLVESLPALYDLTVDDLAELEGWGSRSAENLIAEL
DATRNPPLDDFLAGLGIPDVGATTARALAAHFGTLDALLDADEDALREVDDVGPEVAASI
RTFLDREENRAAIAGLRERGVDPEPFETDAASGPADALDGLTFVFTGSLSVPRGDAQAHV
EAHGANATSSVSGNTDYLVAGERPGRSKRDDAEAEGVPVVDEDAFADLLAERGVAWPPAS
DA
NT seq 2169 nt   +upstreamnt  +downstreamnt
atgacgactccgtcgacccggcacgcggacccggccgagaacccgtacgtcgaggacccg
ccgaccgagttcgacccggtcgaggacctctccgccgacgaggcggccgagcaggccgac
ctgctccgcgcggcggtccgcgagcacgaccaccggtactacgtcgcggccgaccccctg
atatccgacgcggcgtacgacgcgctgttcgcccggctggaggcgctcgaagccgccttc
gacctcccgaccgagggctccccgacccggcgggtcggcggcgagcccctcgacgagctg
gcgaccgtcgaacacgtcgcgccgatgcgatccatcgacaacgcgaccgacgccgacgca
gtccgcgagttcgacgagcgcgtccgcggggggctcgcggacgccgccgaggccggagac
ctccccgatttcgaccccgccgacctcgcgtacgtctgcgagccgaagttcgacggcctc
tcgatcgaggtgatctacgaggacggcgagtacgtccgcgcggccacgcgcggcgacggc
cgcgagggcgacgacgtcaccgagcaggtccggacgatcccctccgtccccggccgcctg
cgcggcgacgaccaccccgccaggctcgccgtccggggagaggtgtacatgccccgcgac
gccttcgaggcgtacaacgaggagctgatcgagcgcggcgaggagccgttcgcgaacccg
cgcaacgccgccgccggcacgctccgccagctcgaccccgcggtcgtcgccgagcgcccc
ctcgacgtctttttcttcgacgtgctcgcgtgggaggcgggcgaggacggcccggagcgc
cccgcgcgccaccgcgacgccctcgacgcgttcgagtcgctcgggctccgccggaacgac
cgggtcgaggtcgtcgacgacgtcgaggccgcgatcgagtaccgcgacgcggtcctcgac
gcccgcgacgacctgaactacgcggtcgacggcgtcgtgatcaaggtcgacgccctcgcg
caccgcgaggcgctcgggagcacgtcgcgcgcgccgcggtgggcgttcgcgcacaagttc
ccgccgcggaccgcgacgacgaccgtccaggggatcacggtccaggtgggccgcacgggg
cggctcacgccggtcgccgagctcgaccccgtcgatgtcggcggcgtcaccgtctcgcgc
gcgacgctccacaaccccgccgagatcgaggccctcggcgtggacgtcggggaccgcgtc
cggatctaccgcgccggcgacgtgatcccctacgtcccggaggtcgtcgagaagcgcagc
gaggggacctacgagttccccgacgcctgcccggtctgcggggccgcggtcgagcgcgac
ggcccgctcgcgttctgtaccggcgggctcggctgtccggcgcagctcgaacgggcggtc
gagcactgggcgcgccgcgacgcgctcgacgtggaggggctcggcccggagcgcgtcgag
cagctccgcgaggccggcctcgtcgagtcgctgccggccctgtacgacctgacggtcgac
gacctcgccgaactggaggggtggggttcgaggagcgccgagaacctgatcgccgaactg
gacgcgacgcggaacccgcccctcgacgacttcctcgccggcctcgggatccccgacgtg
ggcgcgacgacggcccgggcgctcgccgcgcacttcgggacgctcgacgcgctcctcgac
gcggacgaggacgcgctccgcgaggtggacgacgtcggccccgaggtggccgcgtcgatc
cggacgttcctcgaccgcgaggagaaccgcgcggcgatcgcggggctccgcgagcgcggg
gtcgaccccgagccgttcgagaccgacgcggcctccggcccggccgacgcgctcgacggg
ctcaccttcgtgttcaccgggtcgctgtcggtgccccgcggcgacgcgcaggcgcacgtc
gaggcgcacggcgcgaacgccacgtccagcgtctccgggaacaccgactacctcgtcgcg
ggcgagcgcccgggccggtccaagcgcgacgacgccgaggccgagggcgtgcccgtcgtc
gacgaggacgcgttcgccgacctgctcgccgagcgcggcgtggcgtggccgcccgcaagc
gacgcgtga

DBGET integrated database retrieval system