Herbinix luporum: SD1D_0197
Help
Entry
SD1D_0197 CDS
T04072
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
hsd
Herbinix luporum
Pathway
hsd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SD1D_0197 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hsd03400
]
SD1D_0197 (nth)
Enzymes [BR:
hsd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SD1D_0197 (nth)
DNA repair and recombination proteins [BR:
hsd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SD1D_0197 (nth)
Prokaryotic type
SD1D_0197 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
Ogg-HhH
DUF2400
NAGLU_C
Motif
Other DBs
NCBI-ProteinID:
CUH91750
UniProt:
A0A0K8J2Q6
LinkDB
All DBs
Position
I:199153..199869
Genome browser
AA seq
238 aa
AA seq
DB search
MSGVRISKKEKERIENIISELNRVYGTENRCFLHHETPWQLLIATILSAQCTDDRVNQVT
ETLFKKYPRLEDFANANQKELEKDIHSTGFYKNKAKNIIACAQRLIKVYDGIVPKDIEDL
VSLAGVGRKTANVIRGNIYNEPSIVVDTHVKRVSKRLGLTKEEDPVKIEFDLMKKLPTKQ
WIPYNIQIITHGRSICSARNPKCEQCFLKEFCTYGKKYKETLSKQEKQRKNPLIEGVK
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagtaaggatttcaaaaaaggaaaaagaaagaatagaaaatataatttctgaa
ctgaacagggtatatggaacagagaatagatgctttttacaccatgaaaccccttggcag
ctgttaattgccaccatacttagtgcccagtgtacagatgaccgggttaatcaggttact
gagactctttttaaaaaataccctagacttgaggattttgccaatgctaatcaaaaggaa
ctggaaaaagatattcattccacgggattttataaaaataaagcaaaaaatattattgcc
tgtgcacagaggctaattaaggtatatgatggaattgtaccgaaagatatagaagattta
gtgagcctggcaggggtaggcagaaaaacagccaatgtgatacggggtaatatttataat
gaacccagtattgtagtagatacccatgtaaagagggtatccaagcgtctggggcttacc
aaagaagaagacccggtaaaaattgaatttgatttaatgaaaaaattgcccaccaagcag
tggataccgtataatatacaaattataacccatgggagaagtatatgttcagccagaaat
cccaaatgtgagcagtgttttcttaaggagttttgtacatatggaaaaaagtataaagaa
accttaagtaaacaagaaaaacaaaggaaaaaccccttgattgaaggggtgaaataa
DBGET
integrated database retrieval system
