Herbinix luporum: SD1D_0539
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Entry
SD1D_0539 CDS
T04072
Symbol
vanR
Name
(GenBank) Regulatory protein VanR
KO
K18349
two-component system, OmpR family, response regulator VanR
Organism
hsd
Herbinix luporum
Pathway
hsd01502
Vancomycin resistance
hsd02020
Two-component system
Module
hsd_M00652
Vancomycin resistance, D-Ala-D-Ser type
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SD1D_0539 (vanR)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SD1D_0539 (vanR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hsd02022
]
SD1D_0539 (vanR)
01504 Antimicrobial resistance genes [BR:
hsd01504
]
SD1D_0539 (vanR)
Two-component system [BR:
hsd02022
]
OmpR family
VanS-VanR (VanE type vancomycin resistance)
SD1D_0539 (vanR)
Antimicrobial resistance genes [BR:
hsd01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
SD1D_0539 (vanR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
PDE8A_N
KaiA_N
Motif
Other DBs
NCBI-ProteinID:
CUH92091
UniProt:
A0A0K8J380
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All DBs
Position
I:565097..565798
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AA seq
233 aa
AA seq
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MSESILIVDDEKEIADLVELYLKNEGYQVYKFYSGYEALECIKNNKLDLAILDVMLPDID
GFRICQKIREHYFFPIIMLTAKVEDMDKIMGLTLGADDYITKPFNPLEVVARVKTQLRRY
MRYNQSEGGSDLPLNNEFDFKGLVINKDTHNCTLYGKPLNLTPIEFSILWYLCEKRGKVV
SSEELFEAVWGEKFLNNNNTVMAHIGRLREKMNDSYKNPKFIKTVWGVGYQIE
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagagtattttaatagttgatgacgaaaaagaaatagcagatttggttgaattg
tatttgaaaaatgaaggctaccaggtttataaattttactctggttacgaggctttggaa
tgtataaaaaataataaattagatttggctatacttgatgttatgcttcccgatattgat
ggttttaggatttgtcagaaaataagagagcattatttctttcctataattatgttaact
gctaaagttgaggatatggacaagattatgggattgactcttggggctgatgattatatt
actaaaccctttaatcccttagaagttgttgccagggtaaaaactcagttaagaaggtat
atgagatataatcaatctgaaggaggaagtgacctgcctttaaataatgagtttgacttt
aaaggtttggtgattaataaggatacccataattgtactctttatggaaagccacttaat
cttactcccattgaattttcgattttatggtatttatgtgaaaagagagggaaggtagtt
tcttctgaggagctttttgaggctgtgtggggagaaaagtttttgaataataataataca
gttatggctcatatcggaagattaagggaaaaaatgaatgattcatataagaatccaaag
tttattaagacggtatggggggtaggatatcagattgagtaa
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