Herbinix luporum: SD1D_0541
Help
Entry
SD1D_0541 CDS
T04072
Symbol
ddl2
Name
(GenBank) D-alanine-D-alanine ligase
KO
K18856
D-alanine---D-serine ligase [EC:
6.3.2.35
]
Organism
hsd
Herbinix luporum
Pathway
hsd01502
Vancomycin resistance
hsd02020
Two-component system
Module
hsd_M00652
Vancomycin resistance, D-Ala-D-Ser type
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SD1D_0541 (ddl2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SD1D_0541 (ddl2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
hsd01504
]
SD1D_0541 (ddl2)
Enzymes [BR:
hsd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.35 D-alanine---D-serine ligase
SD1D_0541 (ddl2)
Antimicrobial resistance genes [BR:
hsd01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Ser type [MD:
M00652
]
SD1D_0541 (ddl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
RimK
ATP-grasp_LDMS
Motif
Other DBs
NCBI-ProteinID:
CUH92093
UniProt:
A0A0K8J441
LinkDB
All DBs
Position
I:567059..568111
Genome browser
AA seq
350 aa
AA seq
DB search
MNKKKVAIIFGGCSDEYPVSLESAYAIISHIDNNLFETILIGITKEGSWFRYTGDIEKIK
NDTWYEDKEACIPAMISTDRKYPGLIEFNMEELKYLKIDVVFPVLHGKNGEDGTVQGLIE
LAGIPLVGCGTLSSALCMDKDRAHRLVETLGISVPKAIVLLRPYDNKELFEKTKELNYPL
FVKPIKSGSSFGITKVYNKEDLPKAVEIAFMHDDEVIIEENIDGFEVGCAVMGNDELIIG
EIDEIELTDGFFDYTEKYNLKKSFIHMPARIDRDTADKVKETAASIYKILGCRGLARVDM
FITPDKRIVFNEVNTIPGFTAHSRYPNMMKGIGIVFDELITKLIELGMEQ
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaagaaagtggcaattatatttgggggatgttcagatgaatatcctgtttca
cttgaatctgcttatgcaattatttcacatatagataataatttatttgaaacaattttg
ataggtattactaaagagggttcatggtttagatatacaggggatattgaaaagataaaa
aatgatacctggtatgaggataaggaagcttgtataccggctatgatttcaactgatcgt
aaatatcccgggcttatagaatttaatatggaagaattaaaatatttaaaaatagatgtg
gtctttccggtactccatggaaaaaacggagaagacggaacagttcaaggcttgattgaa
ttggccggtattcccttagtgggttgtggaactcttagctccgccctatgcatggataag
gatagggctcatagacttgtcgagaccttaggtataagtgtaccaaaggctatagttctt
ttaaggccttatgataataaggaactttttgaaaaaactaaagaattaaactatcctttg
tttgtaaaacccataaagagcggatcttcttttggtattactaaagtttataataaagaa
gatttacctaaagctgtagagatagcctttatgcatgatgatgaagttattatcgaggaa
aatatcgacggttttgaagtgggctgtgccgtcatgggtaatgatgaattaattattggg
gagattgatgagatagaacttacagatggattttttgattatacagaaaaatataatctt
aaaaaatcttttattcatatgcctgcccgcattgatagggacactgcagataaggtgaaa
gaaacggctgccagtatctataaaattctcggttgcaggggacttgctagggtagatatg
tttataactcctgacaagagaattgtatttaatgaggttaatactatacctggttttaca
gcccatagccgttatcctaatatgatgaaaggtattggtatagtatttgatgaactgatt
acaaaattaatagaattgggtatggaacaatga
DBGET
integrated database retrieval system
