Herbinix luporum: SD1D_1291
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Entry
SD1D_1291 CDS
T04072
Symbol
capD2
Name
(GenBank) UDP-glucose 4-epimerase
KO
K15894
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.115
]
Organism
hsd
Herbinix luporum
Pathway
hsd00541
Biosynthesis of various nucleotide sugars
hsd01100
Metabolic pathways
hsd01250
Biosynthesis of nucleotide sugars
Module
hsd_M00923
UDP-L-FucNAc biosynthesis, UDP-GlcNAc => UDP-L-FucNAc
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SD1D_1291 (capD2)
Enzymes [BR:
hsd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.115 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-inverting)
SD1D_1291 (capD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
Polysacc_syn_2C
3Beta_HSD
GDP_Man_Dehyd
NAD_binding_10
NAD_binding_4
NmrA
RmlD_sub_bind
KR
adh_short
F420_oxidored
Shikimate_DH
NAD_Gly3P_dh_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
CUH92837
UniProt:
A0A0K8J5U3
LinkDB
All DBs
Position
I:complement(1392479..1393498)
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AA seq
339 aa
AA seq
DB search
MYKNKTLLITGGTGSFGNAILKKFLNTDIGEIRIFSRDEKKQDDMRKYYNNEKIKFYIGD
VRDISSINNAMYGVDYIFHAAALKQVPSCEFFPLEAVKTNILGTDNVLTVAISFQVKKII
CLSTDKAAYPINAMGISKAMMEKVFIAKSKTVEPDKTTICGTRYGNVCASRGSVIPLFVE
QIKQGKPLTVTNPNMTRFLMTLEEAVGLVEYAFEHGQSGDIMVMKSPACTIIDLAKALLE
LFGVDNNIKIIGTRHGEKLYETLMTKEEYYVAEDKGNFYRIPADTRDLYYEKYFTQGDQK
LSVEKEYNSNNTRRLTIEEIKEKLLSIDYIQKELAGWSG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtataaaaataaaacattacttattaccgggggcacaggctcttttggcaatgccatc
ctaaagaagtttttaaatacagacataggagaaatcaggatcttttccagagatgaaaaa
aaacaagatgatatgcgcaaatattataacaacgaaaagattaagttttatattggggat
gtaagagatatttcatctattaataacgccatgtacggtgtggattatatctttcatgca
gcagccctaaaacaagttccctcttgtgagttctttccccttgaggcagtaaaaactaat
atccttggtacagataatgtccttactgtggcaatatcttttcaagttaagaaaataata
tgcttatctaccgataaggccgcctatcccataaatgccatgggcatttctaaggctatg
atggaaaaagtctttatagcaaagtcaaagacagtagaaccggataaaactactatatgc
ggtaccaggtacgggaatgtctgtgcttcaagaggatctgttataccgctttttgtagag
caaataaagcaaggaaaaccacttactgtaacaaatcccaatatgacaagatttctaatg
acccttgaggaagctgtgggacttgtggaatatgcttttgaacatggtcaaagcggcgac
attatggtaatgaaatcaccggcctgtacaattattgatttggcaaaagccctgttagaa
ttatttggggtagataacaatattaaaattataggaaccagacatggtgaaaaattatat
gaaacccttatgactaaagaagagtattatgtggctgaagataaggggaatttttaccgg
atacctgcagatacaagagatttatattatgaaaaatattttacccaaggagatcagaaa
ctctctgtagaaaaggaatataactccaacaatacaagaaggcttactattgaggaaata
aaagaaaagttattaagtattgattatattcaaaaagaattggctgggtggtcaggatga
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