Herbinix luporum: SD1D_1707
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Entry
SD1D_1707 CDS
T04072
Symbol
tpiA
Name
(GenBank) Triosephosphate isomerase
KO
K01803
triosephosphate isomerase (TIM) [EC:
5.3.1.1
]
Organism
hsd
Herbinix luporum
Pathway
hsd00010
Glycolysis / Gluconeogenesis
hsd00051
Fructose and mannose metabolism
hsd00710
Carbon fixation by Calvin cycle
hsd01100
Metabolic pathways
hsd01110
Biosynthesis of secondary metabolites
hsd01120
Microbial metabolism in diverse environments
hsd01200
Carbon metabolism
hsd01230
Biosynthesis of amino acids
Module
hsd_M00001
Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate
hsd_M00002
Glycolysis, core module involving three-carbon compounds
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
SD1D_1707 (tpiA)
00051 Fructose and mannose metabolism
SD1D_1707 (tpiA)
00562 Inositol phosphate metabolism
SD1D_1707 (tpiA)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
SD1D_1707 (tpiA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsd04147
]
SD1D_1707 (tpiA)
Enzymes [BR:
hsd01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.1 triose-phosphate isomerase
SD1D_1707 (tpiA)
Exosome [BR:
hsd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
SD1D_1707 (tpiA)
Exosomal proteins of bladder cancer cells
SD1D_1707 (tpiA)
Exosomal proteins of melanoma cells
SD1D_1707 (tpiA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIM
Motif
Other DBs
NCBI-ProteinID:
CUH93252
UniProt:
A0A0K8J7G2
LinkDB
All DBs
Position
I:complement(1823685..1824431)
Genome browser
AA seq
248 aa
AA seq
DB search
MRRKIIAGNWKMNKTPSEAVALINELKPLVASNDADVVFCVPAISLIPAIEAVKGTNIEI
GAQNMYFEESGAYTGEIAPNMLTEVGVKYVIIGHSERREYFNETDETVNKKVLKAFEHGL
TPIICCGESLQQREQGVTIDFVRQQIKIAFLNVSKEDAKKAVIAYEPIWAIGTGKVATSQ
QAEEVCKAIRQCIAEIYDNEVAEAIRIQYGGSVTAASANELFSQPNIDGGLVGGASLKAD
FGKIVNYK
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcgtagaaaaataatagcaggcaattggaagatgaataaaacacctagtgaagcagtt
gcattaataaatgaattaaagcccttagtagcttcaaatgatgctgatgtggtattttgt
gtacctgccataagcttaattcctgccatagaggcagttaagggaacaaatattgaaatc
ggtgcgcagaatatgtactttgaagaaagtggtgcatacaccggtgagattgcccccaat
atgcttacagaagttggcgtaaaatatgttattattgggcattctgaaagaagagaatat
tttaatgaaaccgatgagacagttaataaaaaagttttaaaggcatttgaacacggatta
actcccattatctgctgtggtgaatctttacagcaaagagaacaaggtgttactatagat
tttgttcgccagcagattaagattgccttccttaatgttagcaaggaagatgctaagaag
gctgttatagcttatgagccaatctgggccataggaacaggaaaggtagcaacttcccag
caggcagaagaggtatgtaaggctatacgtcagtgcattgctgagatatatgataatgaa
gtggctgaggcaatccgtatccagtacggcggaagcgttacagctgccagtgctaatgag
cttttctcccagcctaatattgacggaggattagtagggggagcaagccttaaagctgat
tttggaaaaattgttaactacaagtag
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