Herbaspirillum seropedicae SmR1: Hsero_0343
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Entry
Hsero_0343 CDS
T01268
Symbol
lpxC
Name
(GenBank) UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase protein
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00540
Lipopolysaccharide biosynthesis
hse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Hsero_0343 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hse01005
]
Hsero_0343 (lpxC)
Enzymes [BR:
hse01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Hsero_0343 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
hse01005
]
Lipid A
Hsero_0343 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
ADJ61869
UniProt:
D8IW71
LinkDB
All DBs
Position
378946..379881
Genome browser
AA seq
311 aa
AA seq
DB search
MLKQRTIKNLVKTTGVGLHSGTKVELTLRPAAPDTGIIFRRIDLDPVVELPMMATGVGDT
RMASTLTKDGAKVSTVEHLLSACAGLGLDNLYIDLTAEEIPIMDGSASSFVFLLQQAGLQ
EQEAPKKFIRVKKPVEVREGSGDKEKWARLEPYDGFRLKFFIEFNHPAVDGTGQVAEVDF
GIDSYVKEIARARTFGFMQDVETLRGMGLARGGSFENAIVMDEYRILNADGLRYDNEFVR
HKILDAIGDLYIIGHPLLASYDAHKSGHGLNNLLLRELLAQPDAYEIVSFDTLEQAPQTY
VMQAKQEWALN
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaacagcgcacaatcaagaatctggtcaagaccaccggcgtgggtctgcactcc
ggcaccaaggtcgagctgaccctgcgtccggccgcacccgacaccggcatcatcttccgt
cgcatcgatctcgatcccgtggtcgagctgccgatgatggctaccggcgtgggcgacacc
cgcatggcctcgaccctgaccaaggatggcgccaaggtatccaccgtcgaacacctgctg
tcggcctgcgccggcttgggactggacaacctctacatcgacctgaccgccgaagagatt
cccatcatggatggttcggcctcgtccttcgtcttcctgttgcagcaggccggcctgcag
gagcaggaagcgcccaagaagttcatccgcgtcaagaagcccgtggaagtgcgcgagggc
agcggtgacaaggaaaaatgggcgcgcctggaaccctatgacggtttccgcctgaagttc
ttcatcgaattcaaccatcccgccgtggacggcaccggccaggtggccgaggtcgatttc
ggcatcgattcctatgtcaaggaaatcgcccgcgcgcgcaccttcggtttcatgcaggac
gtggaaaccctgcgcggcatgggcctggcgcgcggtggctccttcgagaacgccatcgtc
atggatgagtaccgcatcctcaacgccgacggcctgcgctacgacaacgagttcgtccgc
cacaagatcctcgacgccatcggcgacctctacatcatcggccatccgctgctggccagc
tatgacgcccacaagtccggccacggcctgaacaatctcttgctgcgcgaactgctggcg
cagccggatgcctacgagatcgtcagcttcgatacgctggagcaggcgccgcagacctat
gtgatgcaggccaagcaggagtgggcgctcaactga
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