Herbaspirillum seropedicae SmR1: Hsero_2976
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Entry
Hsero_2976 CDS
T01268
Symbol
mdh
Name
(GenBank) malate dehydrogenase protein
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00020
Citrate cycle (TCA cycle)
hse00270
Cysteine and methionine metabolism
hse00620
Pyruvate metabolism
hse00630
Glyoxylate and dicarboxylate metabolism
hse00680
Methane metabolism
hse00710
Carbon fixation by Calvin cycle
hse00720
Other carbon fixation pathways
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
hse01120
Microbial metabolism in diverse environments
hse01200
Carbon metabolism
Module
hse_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hse_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
hse_M00012
Glyoxylate cycle
hse_M00168
CAM (Crassulacean acid metabolism), dark
hse_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Hsero_2976 (mdh)
00620 Pyruvate metabolism
Hsero_2976 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
Hsero_2976 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Hsero_2976 (mdh)
00720 Other carbon fixation pathways
Hsero_2976 (mdh)
00680 Methane metabolism
Hsero_2976 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Hsero_2976 (mdh)
Enzymes [BR:
hse01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
Hsero_2976 (mdh)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
ADJ64464
UniProt:
D8IZX4
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All DBs
Position
3389613..3390602
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AA seq
329 aa
AA seq
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MAKAPMRVAVTGAAGQIGYSLLFRIANGDLLGKDQPVILQLLEIPDEKAQKALKGVIMEI
DDCAFPLLAGVTAHSDPMTAFKDADIALLVGARPRGPGMERKDLLEANAQIFTVQGKALD
AVASRNVKVLVVGNPANTNAYIAMKSAPNLPAKNFTAMLRLDHNRALSQVAAKIGKPVSA
IEKLCVWGNHSPTMYADYRFATADGVSVKDTINDQEWNKNVFLPTVGKRGAAIIEARGLS
SAASAANAAIDHVRDWVLGTNGKWTTMGIPSDGSYGIPEGTMFGFPVTTENGEYKIVQGL
EIDEFSQERINITLKELMEEREGVKHLVG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcccccatgcgtgttgccgtcactggcgccgccggtcagatcggttactcc
ctgctgttccgcatcgccaacggcgatctgctgggcaaagaccagccggtcatcctgcaa
ctgctggaaatccccgatgagaaggcacagaaggcgttgaagggcgtcatcatggaaatc
gatgactgcgccttcccgctgctggctggcgtgaccgcccacagcgatccgatgaccgcc
ttcaaggacgccgacatcgccctgctggtgggcgcccgtccgcgcggccccggcatggag
cgcaaggacctgctggaagccaacgcccagatcttcaccgtgcagggcaaggcgctggac
gccgtggcctcgcgcaacgtcaaggtgctggtggtgggcaacccggccaacaccaacgcc
tacatcgccatgaagtcggcccccaacctgccggccaagaacttcaccgccatgctgcgt
ctggaccacaaccgcgccctgtcgcaagtggccgccaagatcggcaagccggtctcggcc
atcgaaaagctgtgcgtctggggcaaccactcgcccaccatgtacgccgactaccgtttc
gccaccgctgatggcgtgtcggtcaaggacaccatcaacgaccaggaatggaacaagaac
gtgttcctgcccaccgtcggcaagcgcggcgcggccatcatcgaagcccgcggcctgtcc
tcggccgcttcggcagccaacgcggccatcgaccacgtgcgtgactgggtgctgggcacc
aacggcaagtggaccaccatgggtatcccctccgacggttcctacggcatccccgaaggc
accatgttcggcttcccggtgaccaccgaaaacggcgagtacaagatcgtccagggtctg
gaaatcgatgagttctcgcaagagcgcatcaacatcacgctcaaggagctgatggaagag
cgcgaaggcgtcaagcatctggtcggctaa
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