Herbaspirillum seropedicae SmR1: Hsero_2990
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Entry
Hsero_2990 CDS
T01268
Symbol
metC
Name
(GenBank) cystathionine beta-lyase (cysteine lyase) protein
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00270
Cysteine and methionine metabolism
hse00450
Selenocompound metabolism
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
hse01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Hsero_2990 (metC)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Hsero_2990 (metC)
Enzymes [BR:
hse01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
Hsero_2990 (metC)
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Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Thioredoxin_2
Motif
Other DBs
NCBI-ProteinID:
ADJ64478
UniProt:
D8J0C2
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Position
complement(3405203..3406381)
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AA seq
392 aa
AA seq
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MSDPKQTSLTPQTSLVHSSYRAPDGFEAFPVGIHHASTVLFPDVAAMRSRDWREKLGYTY
GLHGTPTSFVLEARLAEIEGGKYCRVTPSGLAAIAMVNFAFLKSGDDVLLPDNVYGPSKD
LGQWLERDFQITARFYDPMIGEGLAELIRPTTRLVWTEAPGSVSMEVPDIPALCRAAHAK
GVLVAIDNTWSAGIAFKAFEHGVDIVMQAVTKYQSGGSDVLMGAVIVRDQALNEKLELAH
MRLGFGVGMDDVYMVLRSLSSMRLRFEAHDAAARKVAAWLKQRPEIVAVLHPAFEDCPGH
AHWKRDFSGAGGLFSVIFDPRYVEAQTDRFVDSLRLFKIGYSWGGAHSLCVPYRMKGMRR
AWMREGQLVRFNIGLESPEDLIADIEQALARL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaccccaagcagacttcccttaccccgcaaacttcgctggtgcacagcagctat
cgcgccccggatggcttcgaggccttcccggtgggcatccaccacgcttccaccgtactt
tttcccgatgtcgccgccatgcgctcgcgcgactggcgcgaaaagctcggttacacctat
ggcctgcatggcacaccgaccagcttcgtgctggaagcccgcctggccgagatcgaaggc
ggcaagtattgccgcgtcacgcccagcgggctggcggccatcgccatggtcaacttcgct
ttcctcaagagtggcgatgatgtgctgctgcccgacaatgtctatggccccagcaaggat
ctgggccagtggctggaacgcgatttccagatcacggcgcgcttctatgatccgatgata
ggcgagggcctggccgaactgatccgccccactacccgcctggtctggaccgaagcgccc
ggctccgtctccatggaagtgccggatatcccggccctgtgccgcgcggcgcatgccaag
ggcgtgctggtggccatcgataacacctggtccgccggcatcgccttcaaggccttcgag
cacggcgtggacatcgtcatgcaagccgtcaccaagtaccagtccggcggctcggacgta
ttgatgggggcggtgatcgtgcgtgaccaggcgctcaatgaaaagctggagctggcgcac
atgcgcctgggcttcggcgtgggcatggacgacgtctatatggtgctgcgcagcctgtcg
tcgatgcgcctgcgtttcgaggcgcatgatgccgctgcgcgcaaggtggcggcctggctc
aagcagcgcccggagatcgtggcggtgctgcatccggccttcgaggattgccctggccat
gcgcattggaagcgtgacttcagcggcgcaggcggcctgttctcggtcatcttcgatccg
cgctatgtcgaggcgcagaccgaccgcttcgtcgacagcctgcgtctgtttaagatcggc
tacagctggggcggggcgcacagcctgtgcgtgccgtaccggatgaagggcatgcggcgc
gcctggatgcgcgaaggacagctggtgcgcttcaatatcggcctggaatcgcccgaggac
ctgattgccgatatcgagcaggcgctggcgcggctgtaa
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