Herbaspirillum seropedicae SmR1: Hsero_4612
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Entry
Hsero_4612 CDS
T01268
Name
(GenBank) efflux transporter, RND family, MFP subunit protein
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse01501
beta-Lactam resistance
hse01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Hsero_4612
01503 Cationic antimicrobial peptide (CAMP) resistance
Hsero_4612
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hse03036
]
Hsero_4612
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hse02000
]
Hsero_4612
01504 Antimicrobial resistance genes [BR:
hse01504
]
Hsero_4612
Chromosome and associated proteins [BR:
hse03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Hsero_4612
Transporters [BR:
hse02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Hsero_4612
Antimicrobial resistance genes [BR:
hse01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Hsero_4612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
DUF1344
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
ADJ66078
UniProt:
D8IXV6
LinkDB
All DBs
Position
complement(5291990..5293276)
Genome browser
AA seq
428 aa
AA seq
DB search
MHPTASTPRRQGRTSSATARLALSLILVAVLAACSRSGDQPKPTAQAEVGYVVVKAQRQA
LTTELPGRTTAYLAADIRPQVGGIIQKRLFKEGSTVKAGQPLYQIDPASYQAAYDSARAS
LLKAEATLASSKLKAERYAELNKIDAVSKQDNDDAQSTLRQNQADVEVQKAAVQTAAINL
QYTKILSPISGRIEKSAVTPGALVTASQTTALTTVQQIDPIYVDVTQSTVDLLRLRRELA
SGQIRKSGENAAQVKIVLEDGSTYERPGKLEFTGLSVDTGTGMITLRAVVPNPDGVLLPG
AYVRAVLEEGVDDHALLAPQKAVSRDQTGAATALVLGADGKVQQRLVSVARAVGNNWWVS
RGLKEGDKLIVDGLQKVRTGDAPRAIDITDSLQKDLAREAAAAAADPSLGGDAGKDSAPA
SATAAQSK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccactgcaagcacaccgcgccgccaagggcgcacttcctccgccacggcgcgc
ctggcgctgtccctgatcctggttgccgtgctggcggcctgttcgcgctcgggcgaccag
cccaagcccacggcgcaggccgaggtcggctatgtggtcgtcaaggcgcagcgccaggcg
ctgaccaccgagctgcccggccgcaccacggcctacctggccgccgacatccgcccgcag
gtgggcggcatcattcagaagcgcctattcaaggaaggcagcaccgtcaaggccggccag
cccttgtaccagatcgatccggccagctaccaggccgcctacgacagcgcccgggcctcg
ctgctcaaggccgaggccacgctggcttcctcgaagctgaaggccgagcgctatgccgaa
ctgaacaagatcgacgccgtctccaagcaggacaacgacgacgcccagagcaccctgcgc
cagaaccaggccgatgtggaagtgcagaaggcggccgtgcagaccgccgccatcaatctg
caatacaccaagatcctttcacccatctcgggccgcatcgagaaatctgccgtcaccccc
ggtgcgctggtgacggccagccagaccacggcgttgaccacggtgcagcagatcgacccg
atctatgtcgatgtcacccagtccaccgtggacttgctgcgcctgcgccgcgaactggcc
agcggccagatcaggaagagcggcgagaacgcggcccaggtcaagatcgtgctggaagac
ggctctacctatgagcggcccggcaagctggaattcacgggcctgtcggtcgataccggc
accggcatgatcaccctgcgcgcggtcgtccccaacccggatggcgtgttgctgccgggc
gcttacgtgcgtgcagtactggaagaaggcgtggacgaccacgcgctgctggcgccgcag
aaggccgtcagccgcgaccagactggtgctgccacggccctggtgctgggcgccgacggc
aaggtgcagcagcgcctggtgagcgtggcgcgtgcggtgggcaacaactggtgggtcagc
cggggcttgaaggaaggcgacaagctcatcgtcgacggcctgcagaaggtgcgcaccggt
gacgccccccgcgccatcgacatcaccgacagcctgcagaaggacctggcgcgtgaagcc
gccgcagcagcagccgatccttcgctgggaggggatgccggcaaggatagcgctccagcc
tcggccactgccgcccagtcgaagtaa
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