KEGG   Haemophilus seminalis: L3077_03260
Entry
L3077_03260       CDS       T08114                                 
Symbol
cas5c
Name
(GenBank) type I-C CRISPR-associated protein Cas5c
  KO
K19119  CRISPR-associated protein Cas5d
Organism
hsem  Haemophilus seminalis
Brite
KEGG Orthology (KO) [BR:hsem00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hsem02048]
    L3077_03260 (cas5c)
Prokaryotic defense system [BR:hsem02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    L3077_03260 (cas5c)
SSDB
Motif
Pfam: Cas_Cas5d DUF5654
Other DBs
NCBI-ProteinID: UJZ90510
LinkDB
Position
650980..651654
AA seq 224 aa
MNQIRLHIWGDYACFTRPEMKVERVSYDVITPSAARGILAAVHWKPAIRWVIDRIYVLKP
IRFESVRRNELGGKISAGKVSGAMKRKSVADLYTLIEDDRQQRAATVLKDVAYVIEAHAV
LTAKAGADETVTKHIEMFKRRAKKGQCFQQPCLGVREFPADFALIDEDEPLPPSALSENE
ANRDLGWMLHDIDFDHGNTPHFFRAEMKDGVIDVPPFYAEEVKA
NT seq 675 nt   +upstreamnt  +downstreamnt
atgaaccaaatccgcctacacatttggggcgattatgcctgttttacccgtccggagatg
aaggtggagcgggtgtcttatgatgttatcacaccgtcggcggcgcgcgggattttggcg
gcggtgcattggaagccggcgattcggtgggtgattgaccggatttatgtgttgaagcca
attcggtttgagtcggtgcggcgcaatgaattgggcggcaagatttcggcgggtaaggtc
agcggggcgatgaagcgcaagagcgttgccgatttatatacgctgattgaagacgaccgc
cagcagcgcgcggcgacagtgcttaaagacgtggcttatgtgattgaagcccatgcggtg
ctgacggcaaaagcgggggcggatgagaccgttaccaagcatattgagatgttcaaacgc
cgtgcgaaaaaggggcaatgctttcagcaaccttgtttgggcgtgcgtgaatttcctgcc
gattttgcgttgattgatgaagacgagccgctgccgccgtcggcgttatcggaaaacgag
gcaaaccgtgatttaggctggatgctgcacgatattgattttgatcacggcaacacgccg
cattttttccgcgcggaaatgaaagatggcgtgattgatgtgccgccgttttacgccgag
gaggtgaaagcatga

DBGET integrated database retrieval system