Hymenobacter sediminicola: H4317_01000
Help
Entry
H4317_01000 CDS
T09117
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
hsk
Hymenobacter sediminicola
Pathway
hsk00270
Cysteine and methionine metabolism
hsk00450
Selenocompound metabolism
hsk00670
One carbon pool by folate
hsk01100
Metabolic pathways
hsk01110
Biosynthesis of secondary metabolites
hsk01230
Biosynthesis of amino acids
hsk04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hsk00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
H4317_01000 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
H4317_01000 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
H4317_01000 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
H4317_01000 (metH)
Enzymes [BR:
hsk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
H4317_01000 (metH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QNH62439
UniProt:
A0A7G7W7U6
LinkDB
All DBs
Position
217248..220976
Genome browser
AA seq
1242 aa
AA seq
DB search
MPTVLPASATTASPLHDILRQRVLILDGAMGTMIQRHTLTEEDFRGTRFADHPKPLRGNN
DLLSLTRPDIIRGIHDEYFAAGADMVETNTFSGTTIAQADYGLEHVVYELNYESARLARE
SADAFTALTPDKPRFVAGAVGPTNRTASLSPDVNRPGFRAVTFDELATAYLEQVRGLVDG
GSDALLIETIFDTLNAKAALYAVQKFFDEGGKVVPVMISGTITDASGRTLSGQTVEAFWN
SIRHLPLLSVGLNCALGADQLKVYIKELSRIADVHISAYPNAGLPNAFGGYDESAQEFAG
VVEGYLADGLVTVVGGCCGTTPQHIGELARLAEKYAPRALPEVPKATRLSGLEPFGVYPD
SLFVNVGERCNVTGSRAFARLIRTGNYEQALQVARDQVEGGAQVIDVNMDEGMLDSEQAM
TTFLNLIASEPDISRVPVMIDSSKWSVLEAGLKCVQGKSIVNSISLKEGEEVFKQRARTV
RQYGAAVVVMAFDENGQADNYEKRIEICRRSYDILVNEVGFPAEDIIFDPNILTVGTGME
EHRNYALDFIEAVRWIKANLPGALTSGGVSNISFSFRGNDVVREAMHSSFLYHAIRAGLD
MGIVNPSQLAVYDEVPKDLLELVEDVLLNRRPDATERLVDFADTVKQKDKVEVVADAWRS
LPVKERLQHALVKGITEFIDQDTEEVRQLVGRPLEVIEGPLMAGMNVVGDLFGAGKMFLP
QVVKSARVMKKAVAYLEPYLLADKQSGDRQTAGKILLATVKGDVHDIGKNIVGVVLACNN
FDIVDLGVMVPLERILDEAAKQQVDVIGLSGLITPSLDEMVYVAQEMEKRGLKTPLLIGG
ATTSRLHAAVKIAPNYSGPIVHVNDASRSVGVAAALLGSADAEYARTVREEYRQLREDYA
GRQRDKNYLTIEAARENGFKADWETTPIVKPTFLGTKALENYDLAELAEYIDWTPFFQTW
ELKGRYPRILTDENVGEAATQLFNDAQAMLKRIIDEKLLTARAVVGFWPANTVGYDTVQV
FKDDTRQEVQTEFFTLRQQSEKAAGVPNLAFSDFVAPRETGRADYIGGFAVTAGIGIEKH
LERFEAEHDDYSSILMKALADRLAEAFAERLHQRVREEFWGYDPAENLTNEDLIQEKYKG
VRPAPGYPGCPDHTEKITLFNLLDAETATGIRLTENLAMYPASSVSGLYYAHPDSRYFGL
GRIGQDQVADMAQRKHMPLPELERWLMPNLNYEPSSVPVTAL
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgtcctccctgcctccgccactactgcgtctcccctccacgacatcctgcgt
cagcgcgtgctgattctcgacggcgctatgggcaccatgattcagcgccatacgctcacg
gaggaggatttccggggcacgcgcttcgccgaccaccccaagcctctgcgcggcaacaac
gacctgctcagcctcacgcggcctgatattatccgcggcattcacgacgagtatttcgcg
gccggggccgacatggtggaaaccaacacgtttagcggcaccaccatcgcccaggccgac
tacgggctggagcatgtggtatatgagctgaactacgagtcggcgcggctggcgcgggag
tcggctgatgcgtttacggccctcacgcccgacaagccgcgcttcgtggccggggccgtg
gggcccaccaaccgcaccgccagcctctcgcccgacgtgaaccgccccggcttccgggcc
gtgacgttcgatgagctggccaccgcctatctggagcaggtgcgcggcctcgtggacggc
ggctccgacgcgctgctcatcgaaaccatcttcgacacgctcaacgccaaagcagctttg
tacgcggtgcagaagttcttcgacgaaggcggcaaagtggtgcccgtcatgatttcgggc
acgattaccgacgcttcgggccgcaccctgagcgggcagacggtggaggccttctggaac
tccatccgccacctgccgctcttgagcgtagggctgaactgcgccctcggtgccgaccag
ctgaaggtgtacatcaaggagctgagccgcattgccgacgtacacatttcggcttacccc
aacgccggcttgcccaacgcgtttggtggctacgatgagtcggcccaggaatttgcgggc
gtggtggaaggctacctggccgacggactggtgacggtggtgggcggctgttgcggcacc
acgccccagcacatcggtgagctggcccggctggcggagaaatacgcgccacgggcgtta
ccggaagtacccaaagccacccgcctgagtggcctggaaccgttcggcgtgtatcccgac
agtctgttcgtgaacgtgggcgagcggtgcaacgtgacgggtagccgagccttcgcccgc
ctcatccgcaccggcaactatgagcaggccctgcaggtggcccgcgaccaagtggaaggc
ggcgcgcaggtcatcgacgtgaacatggacgaaggcatgctggactcggagcaggccatg
actacgttcctgaacctgattgcttcggagcccgacatttcgcgggtgcccgtcatgatt
gactcctcgaagtggagcgtgctcgaagccggcctcaagtgcgtgcagggcaagagcatc
gtcaactccatttcgctcaaggaaggcgaagaagtatttaaacagcgggcccgtaccgtg
cgccagtacggcgcggccgtggtggttatggccttcgacgagaacggccaggccgacaac
tacgagaagcgcatcgaaatctgccggcgcagctacgatatcctggtgaacgaagtcggt
ttcccggccgaggacatcatcttcgaccccaacatcctgacggtgggcaccggcatggaa
gagcaccgcaactacgcgctggacttcatcgaggccgtccgctggattaaagccaacctg
cccggcgccctcaccagcggtggcgtctcaaacatcagtttctccttccgcggcaacgac
gtggtgcgcgaggccatgcactcttccttcctctaccacgccatccgcgccggcctggac
atgggcatcgtgaaccccagtcagctggctgtgtacgacgaggttccgaaggacctgctg
gagctggtggaagacgtgctcctgaaccgtcgccccgatgctactgagcgtctcgtggac
tttgccgacacggtgaagcagaaggacaaggtggaagtggtggccgacgcctggcgcagc
ctcccggtgaaggaacgcctgcaacacgcgctggtgaaaggcattaccgaattcatcgac
caggacaccgaggaggtgcggcagctggtgggccgcccgctggaggtgattgaaggcccg
ctaatggccggtatgaacgtggtgggtgacctgttcggggcgggcaaaatgtttttgccc
caggtggtgaaatcggcccgggtgatgaagaaagcggtggcctacttggagccctacctg
ctggccgacaagcagagcggcgaccggcaaacagccggcaaaattctgctggccacagtg
aaaggcgacgtgcacgacatcggcaagaacatcgtgggcgtggtgctggcctgcaacaac
ttcgatattgtggacctgggcgtgatggtgccgctggaacgtattctcgacgaagccgcc
aagcagcaagtggacgtcatcgggctaagcggcctgattacaccgagcctcgatgaaatg
gtgtacgtggcgcaggaaatggagaagcgcggcctgaaaacgccgttgctcatcggtggt
gctaccacctcacgcctgcacgccgccgtgaagattgcgcccaactactccggacccatc
gtgcacgtcaacgacgcgtcccgctcggtgggtgtggcggcagcgctgttgggttcggcc
gatgcggagtacgcccgcaccgtgcgtgaggagtaccgccagctccgtgaagactacgcc
ggccgccagcgcgacaaaaactacctcaccattgaggccgctcgtgagaatggcttcaag
gctgactgggaaaccacgcccatcgtgaagccgaccttcttgggcaccaaagccctggaa
aactacgatttggctgaactggccgagtacatcgactggacgccgttcttccagacctgg
gagctaaaaggccgctacccgcgcatcctcaccgatgaaaacgtgggcgaagctgccacc
cagctcttcaacgacgcgcaagccatgctcaagcgcatcatcgacgagaagctgctcacg
gcccgcgcggtagtgggcttctggccggccaacactgtcggctacgataccgtgcaggta
ttcaaggacgatacccgccaggaagtgcaaaccgagtttttcacgttgcgtcagcagagc
gaaaaagccgccggcgtgcccaacctcgccttctccgacttcgtggcgccgcgtgaaacc
ggccgcgccgactacatcggtggctttgccgtgacggccggtattggtattgaaaagcac
ctggagcggtttgaagccgagcacgacgactacagcagcatcctgatgaaagccttggcc
gaccgcctcgccgaggcctttgccgagcgcctgcaccagcgcgtgcgcgaggagttctgg
ggctacgacccggccgaaaacctcaccaatgaggacctgattcaagagaagtacaaaggt
gtgcggcccgcccccggctaccccggctgccccgaccacaccgaaaaaatcacccttttc
aacctgctcgacgccgaaaccgccaccggcatccgcctcaccgaaaacctggccatgtac
cccgcctcttccgtgagcggcctctactacgcccaccccgacagccgctacttcggcctc
ggccgcatcggccaggaccaggtagccgacatggcccagcgcaaacacatgcccctgccg
gagttggagcgctggctgatgccgaacctgaactacgaacccagcagcgtgccggtaacg
gcgctatag
DBGET
integrated database retrieval system